View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2270_low_32 (Length: 237)

Name: NF2270_low_32
Description: NF2270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2270_low_32
NF2270_low_32
[»] chr4 (26 HSPs)
chr4 (46-179)||(43510993-43511113)
chr4 (177-220)||(41326542-41326585)
chr4 (177-220)||(53062067-53062110)
chr4 (173-220)||(47085896-47085943)
chr4 (183-220)||(44937019-44937056)
chr4 (181-220)||(11671914-11671953)
chr4 (181-220)||(33633069-33633108)
chr4 (177-220)||(34411320-34411363)
chr4 (181-220)||(34413071-34413110)
chr4 (177-215)||(35106274-35106312)
chr4 (178-220)||(50381858-50381900)
chr4 (179-220)||(22422736-22422777)
chr4 (179-220)||(28440459-28440500)
chr4 (179-220)||(42857520-42857561)
chr4 (187-220)||(55589840-55589873)
chr4 (177-220)||(470179-470222)
chr4 (177-220)||(25052350-25052392)
chr4 (181-220)||(32208257-32208296)
chr4 (177-220)||(39843642-39843685)
chr4 (177-220)||(44022751-44022794)
chr4 (185-220)||(52470214-52470249)
chr4 (185-220)||(56051164-56051199)
chr4 (179-217)||(8718616-8718654)
chr4 (177-218)||(52457182-52457223)
chr4 (183-220)||(55724380-55724417)
chr4 (179-220)||(56052738-56052779)
[»] chr7 (23 HSPs)
chr7 (175-220)||(20383935-20383980)
chr7 (177-220)||(33614079-33614122)
chr7 (181-220)||(40786417-40786456)
chr7 (179-220)||(10048285-10048326)
chr7 (179-220)||(34996844-34996885)
chr7 (175-220)||(37031199-37031244)
chr7 (179-220)||(41816531-41816572)
chr7 (179-220)||(45657788-45657829)
chr7 (181-220)||(11315535-11315574)
chr7 (177-220)||(22643870-22643913)
chr7 (177-220)||(41203992-41204035)
chr7 (177-220)||(46290419-46290462)
chr7 (177-223)||(38369871-38369917)
chr7 (183-220)||(3633016-3633053)
chr7 (179-220)||(44063000-44063041)
chr7 (179-220)||(48402504-48402545)
chr7 (179-220)||(49024147-49024188)
chr7 (176-220)||(3563124-3563168)
chr7 (181-220)||(33989804-33989843)
chr7 (177-218)||(6797903-6797944)
chr7 (179-220)||(40091005-40091046)
chr7 (181-218)||(43051736-43051773)
chr7 (176-220)||(11202356-11202400)
[»] scaffold0380 (1 HSPs)
scaffold0380 (173-220)||(39-86)
[»] chr3 (24 HSPs)
chr3 (177-220)||(43659037-43659080)
chr3 (177-220)||(52099842-52099885)
chr3 (177-220)||(52796838-52796881)
chr3 (177-219)||(39197962-39198004)
chr3 (179-220)||(29109235-29109276)
chr3 (175-220)||(36040320-36040365)
chr3 (177-220)||(27516325-27516368)
chr3 (181-220)||(52253900-52253939)
chr3 (180-218)||(18371098-18371136)
chr3 (173-218)||(4987016-4987061)
chr3 (181-217)||(20497405-20497441)
chr3 (177-217)||(28686604-28686644)
chr3 (177-220)||(28255270-28255313)
chr3 (185-220)||(28874307-28874342)
chr3 (181-220)||(31880674-31880713)
chr3 (185-220)||(44247728-44247763)
chr3 (177-220)||(50001961-50002004)
chr3 (181-219)||(14093000-14093038)
chr3 (182-220)||(43884900-43884938)
chr3 (179-220)||(39128060-39128101)
chr3 (177-209)||(1807965-1807997)
chr3 (176-220)||(7269173-7269217)
chr3 (177-217)||(44385359-44385399)
chr3 (176-220)||(45339683-45339727)
[»] chr8 (17 HSPs)
chr8 (179-220)||(33099697-33099738)
chr8 (177-218)||(43325448-43325489)
chr8 (177-220)||(2116610-2116653)
chr8 (182-220)||(9579396-9579434)
chr8 (179-220)||(9200237-9200278)
chr8 (181-220)||(3547236-3547275)
chr8 (177-219)||(8747879-8747921)
chr8 (181-219)||(44061187-44061225)
chr8 (183-220)||(25563092-25563129)
chr8 (176-220)||(30266097-30266141)
chr8 (181-220)||(12845675-12845714)
chr8 (183-218)||(18753961-18753996)
chr8 (177-220)||(31666158-31666201)
chr8 (173-220)||(33449445-33449492)
chr8 (179-220)||(13884858-13884899)
chr8 (182-218)||(9636308-9636344)
chr8 (180-220)||(22914540-22914580)
[»] chr2 (18 HSPs)
chr2 (179-220)||(41322065-41322106)
chr2 (174-218)||(39640449-39640493)
chr2 (177-220)||(38376533-38376576)
chr2 (177-220)||(42578581-42578624)
chr2 (180-220)||(4843468-4843508)
chr2 (181-220)||(9225199-9225238)
chr2 (174-220)||(37472174-37472220)
chr2 (179-220)||(3207207-3207248)
chr2 (179-220)||(27337184-27337225)
chr2 (179-220)||(31570463-31570504)
chr2 (181-220)||(725179-725218)
chr2 (181-220)||(2020135-2020174)
chr2 (182-217)||(2317619-2317654)
chr2 (185-220)||(3462599-3462634)
chr2 (181-220)||(9273067-9273106)
chr2 (181-220)||(10913453-10913492)
chr2 (177-220)||(39676226-39676269)
chr2 (179-220)||(13070456-13070497)
[»] chr6 (5 HSPs)
chr6 (175-219)||(3711422-3711466)
chr6 (177-220)||(251795-251838)
chr6 (182-220)||(7341317-7341355)
chr6 (181-219)||(28470591-28470629)
chr6 (179-215)||(11577686-11577722)
[»] chr5 (20 HSPs)
chr5 (180-220)||(1157079-1157119)
chr5 (177-220)||(17888379-17888422)
chr5 (179-222)||(39039803-39039846)
chr5 (174-220)||(233412-233458)
chr5 (179-220)||(11447326-11447367)
chr5 (179-220)||(19962475-19962516)
chr5 (174-219)||(27878590-27878635)
chr5 (181-220)||(8223814-8223853)
chr5 (178-220)||(2683685-2683727)
chr5 (178-220)||(9780160-9780202)
chr5 (183-220)||(26078213-26078250)
chr5 (177-218)||(38503509-38503550)
chr5 (177-220)||(28905635-28905678)
chr5 (177-220)||(28942030-28942073)
chr5 (177-219)||(37226126-37226168)
chr5 (179-220)||(39164417-39164459)
chr5 (179-220)||(8205921-8205962)
chr5 (179-216)||(26647842-26647879)
chr5 (179-216)||(26919427-26919464)
chr5 (177-218)||(29801653-29801694)
[»] chr1 (26 HSPs)
chr1 (176-220)||(11240735-11240779)
chr1 (176-219)||(29232641-29232684)
chr1 (177-220)||(50372771-50372814)
chr1 (179-220)||(2167805-2167846)
chr1 (175-220)||(10617335-10617380)
chr1 (179-220)||(46085521-46085562)
chr1 (180-220)||(36184775-36184815)
chr1 (180-220)||(45707960-45708000)
chr1 (181-220)||(11386386-11386425)
chr1 (177-220)||(34918462-34918505)
chr1 (177-220)||(43360268-43360311)
chr1 (181-220)||(45337545-45337584)
chr1 (182-220)||(27803244-27803282)
chr1 (174-220)||(29733302-29733348)
chr1 (174-220)||(30720902-30720948)
chr1 (179-217)||(46600185-46600223)
chr1 (183-220)||(13703278-13703315)
chr1 (179-220)||(23202010-23202051)
chr1 (179-220)||(30724587-30724628)
chr1 (176-220)||(26940435-26940479)
chr1 (177-220)||(16660082-16660125)
chr1 (182-220)||(38674172-38674210)
chr1 (179-220)||(5510343-5510384)
chr1 (179-220)||(19727771-19727812)
chr1 (179-220)||(32454636-32454677)
chr1 (177-218)||(51048198-51048239)
[»] scaffold0072 (1 HSPs)
scaffold0072 (177-220)||(46510-46553)
[»] scaffold0100 (1 HSPs)
scaffold0100 (180-220)||(44388-44428)
[»] scaffold0031 (2 HSPs)
scaffold0031 (181-220)||(1486-1525)
scaffold0031 (173-217)||(105521-105565)
[»] scaffold0069 (1 HSPs)
scaffold0069 (182-220)||(35962-36000)
[»] scaffold0287 (1 HSPs)
scaffold0287 (183-220)||(13032-13069)
[»] scaffold0385 (1 HSPs)
scaffold0385 (177-220)||(11908-11950)
[»] scaffold0459 (1 HSPs)
scaffold0459 (182-220)||(12341-12379)
[»] scaffold0366 (2 HSPs)
scaffold0366 (182-220)||(9982-10020)
scaffold0366 (182-220)||(13648-13686)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 43511113 - 43510993
Alignment:
Q  46 ttctagttattttgtcatggttttccatttcacatgtctgttgaacttcttcacctcatttcaagtctatttcaatttaagaactaaccaattcaatgag 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||    
T  43511113 ttctagttattttgtcatggttttccatttcacatgtctgttgaacttc-------------aagtctatttcaatttaagaactaaccaattcaatgag 43511027  T
Q  146 tacaatttcaccgttaatttgcatgactcactta 179  Q
    ||||||||||||||||||||||||||||||||||    
T  43511026 tacaatttcaccgttaatttgcatgactcactta 43510993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 41326542 - 41326585
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41326542 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 41326585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 53062067 - 53062110
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  53062067 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 53062110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 47085943 - 47085896
Alignment:
Q  173 tcacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  47085943 tcacttaggatgtgtttggttaagaagagaagttgtgaagagagaaat 47085896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 44937019 - 44937056
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44937019 tgtgtttggtttagaagagaagttgtgaagagagaaat 44937056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 11671953 - 11671914
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  11671953 ggtgtgtttggttaagaagagaagttgtgaagagagaaat 11671914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 33633069 - 33633108
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  33633069 ggtgtgtttggtttagaagagaagttgggaagagagaaat 33633108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34411320 - 34411363
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  34411320 ttagggtgtgtttggtatggaagagaagttgtgaagagagaaat 34411363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 34413110 - 34413071
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34413110 ggtgtgtttggttaagaagagaagttgtgaagagagaaat 34413071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 35106312 - 35106274
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagaga 215  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35106312 ttagggtgtgtttggtttaggagagaagttgtgaagaga 35106274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 50381858 - 50381900
Alignment:
Q  178 tagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  50381858 tagggtgtgtttggtttataagagaagttgtgaagagaaaaat 50381900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 22422736 - 22422777
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  22422736 agggtgtgtttggtttggaagaaaagttgtgaagagagaaat 22422777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 28440459 - 28440500
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  28440459 agggtgtgtttggtttacaagagaaattgtgaagagagaaat 28440500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 42857520 - 42857561
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  42857520 agggtgtgtttggttaagaggagaagttgtgaagagagaaat 42857561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 55589840 - 55589873
Alignment:
Q  187 tttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||    
T  55589840 tttggtttagaagagaagttgtgaagagagaaat 55589873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 470222 - 470179
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||    
T  470222 ttaggatgtgtttggtttgaaagagaagttgtgaagagagaaat 470179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 25052392 - 25052350
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  25052392 ttagggtgtgtttggttg-gaagagaagttgtgaagagagaaat 25052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 32208257 - 32208296
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  32208257 ggtgtgtttagtttataagagaagttgtgaagagagaaat 32208296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 39843685 - 39843642
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||    
T  39843685 ttagggtgtgtttggtttggaagagaagttgtggagagataaat 39843642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 44022794 - 44022751
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  44022794 ttagggtgtgtttggttgtgaagagaaattgtgaagagagaaat 44022751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 52470214 - 52470249
Alignment:
Q  185 tgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||| |||||||||||||||||||||    
T  52470214 tgtttggtttagaatagaagttgtgaagagagaaat 52470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 56051164 - 56051199
Alignment:
Q  185 tgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||||||||||||||||||||||||    
T  56051164 tgtttggtttggaagagaagttgtgaagagagaaat 56051199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 8718616 - 8718654
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  8718616 agggtgtgtttggttcggaagagaagttgtgaagagaga 8718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 52457182 - 52457223
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||| ||||||||||| |||||||||||||| ||||||||||    
T  52457182 ttagagtgtgtttggtgtagaagagaagttgagaagagagaa 52457223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 55724380 - 55724417
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  55724380 tgtgtttggtttacaagagaagttatgaagagagaaat 55724417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 56052779 - 56052738
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||  |||||||| ||||||||||||||||    
T  56052779 agggtgtgtttggttatgaagagaaattgtgaagagagaaat 56052738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 20383980 - 20383935
Alignment:
Q  175 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20383980 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 20383935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 33614079 - 33614122
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  33614079 ttagggtgtgtttggtttaaaagagaagttgtgaagagagaaat 33614122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 40786456 - 40786417
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40786456 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 40786417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 10048326 - 10048285
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  10048326 agggtgtgtttggtttaaaagagaagttgtgaagagagaaat 10048285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 34996885 - 34996844
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  34996885 agggtgtgtttggtatagaagagaagttgtgaagagagaaat 34996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 37031199 - 37031244
Alignment:
Q  175 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  37031199 acttagggtgtgtttggtgtagaagagaagttgtaaagagagaaat 37031244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 41816531 - 41816572
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  41816531 agggtgtgtttggtttaaaagagaagttgtgaagagagaaat 41816572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 45657829 - 45657788
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  45657829 agggtgtgtttggtttggaagagaagttgtgaagagagaaat 45657788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 11315574 - 11315535
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  11315574 ggtgtgtttggtttggaagagaagttgtgaagagagaaat 11315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 22643870 - 22643913
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  22643870 ttaggatgtgtttggtttagaaaagaagttgtgaagagagaaat 22643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 41204035 - 41203992
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  41204035 ttagggtgtgtgtggtttggaagagaagttgtgaagagagaaat 41203992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 46290419 - 46290462
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  46290419 ttagggtctgtttggtgtagaagagaagttgtgaagagagaaat 46290462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 38369917 - 38369871
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaattga 223  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||    
T  38369917 ttagggtgtgtttggtttgggagagaagttgtgaagagagagattga 38369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 3633053 - 3633016
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3633053 tgtgtttggtgtagaagagaagttgtgaagagagaaat 3633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 44063041 - 44063000
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  44063041 agggtgtgtttggtttagaagagaaattgtgaagagaaaaat 44063000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 48402504 - 48402545
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  48402504 agggtgtgtttggttaggaagagaagttgtgaagagagaaat 48402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 49024147 - 49024188
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  49024147 agggtgtgtttggtttaggagaaaagttgtgaagagagaaat 49024188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 3563168 - 3563124
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||    
T  3563168 cttaaggtatgtttggtttggaagagaagttgtgaagagagaaat 3563124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 33989843 - 33989804
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  33989843 ggtgtgtttggtttataggagaagttgtgaagagagaaat 33989804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 6797944 - 6797903
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||||||||||| |||||| |||| |||||||||||||||||    
T  6797944 ttagggtgtgttgggtttaaaagataagttgtgaagagagaa 6797903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 40091005 - 40091046
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| |||||||| |||||||||||||||||||||| ||||    
T  40091005 agggtatgtttggtatagaagagaagttgtgaagagataaat 40091046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 43051736 - 43051773
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  43051736 ggtgtgtttggtttataagagaaattgtgaagagagaa 43051773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 11202356 - 11202400
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| ||||||||||||||| |  |||||||||||||||||||||    
T  11202356 cttatggtgtgtttggtttatagcagaagttgtgaagagagaaat 11202400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 39 - 86
Alignment:
Q  173 tcacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  39 tcacttagggtgtgtttggtttggaagagaagttgtgaagagagaaat 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 43659037 - 43659080
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43659037 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 43659080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 52099885 - 52099842
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  52099885 ttagggtgtgtttggtttagaagagaagttgtgaagagaaaaat 52099842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 52796881 - 52796838
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  52796881 ttagggtgtgtttggtttggaagagaagttgtgaagagagaaat 52796838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 39198004 - 39197962
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  39198004 ttagggtgtgtttggtttagaagagaagttgtaaagagagaaa 39197962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 29109235 - 29109276
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  29109235 agggtgtgtttggtttggaagagaagttgtgaagagagaaat 29109276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 36040320 - 36040365
Alignment:
Q  175 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||  |||||||||||||||||||||||||    
T  36040320 acttagggtgtgtttggttaggaagagaagttgtgaagagagaaat 36040365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 27516368 - 27516325
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  27516368 ttagggtgtgtttggtttggaagagaagttgagaagagagaaat 27516325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 52253939 - 52253900
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52253939 ggtgtgtttggtttaaaagagaagttgtgaagagagaaat 52253900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 18371136 - 18371098
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  18371136 gggtgtgtttggtatagaagagaagttgtgaagagagaa 18371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 4987061 - 4987016
Alignment:
Q  173 tcacttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  4987061 tcactaagggtgtgtttggtttggaagagaagttgagaagagagaa 4987016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 20497441 - 20497405
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20497441 ggtgtgttttgtttagaagagaagttgtgaagagaga 20497405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 28686644 - 28686604
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  28686644 ttagggtgtgtttggtttggaagagaaattgtgaagagaga 28686604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 28255313 - 28255270
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||    
T  28255313 ttagggtgtgtttggctaagaagagaaattgtgaagagagaaat 28255270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 28874307 - 28874342
Alignment:
Q  185 tgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28874307 tgtttggtttagaggagaagttgtgaagagagaaat 28874342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 31880674 - 31880713
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  31880674 ggtgtgtttgatttaaaagagaagttgtgaagagagaaat 31880713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 44247763 - 44247728
Alignment:
Q  185 tgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44247763 tgtttggttgagaagagaagttgtgaagagagaaat 44247728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 50002004 - 50001961
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||    
T  50002004 ttagggtatgtttggtttggaagagaagttgtaaagagagaaat 50001961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 14093038 - 14093000
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  14093038 ggtgtgtttggtttggaaaagaagttgtgaagagagaaa 14093000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 43884900 - 43884938
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  43884900 gtgtgtttggttaagaagagaaattgtgaagagagaaat 43884938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 39128060 - 39128101
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  39128060 agggtgtgtttggtttagagaagaagttgagaagagagaaat 39128101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 1807997 - 1807965
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtg 209  Q
    |||||||||||||||||||||| ||||||||||    
T  1807997 ttagggtgtgtttggtttagaaaagaagttgtg 1807965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 7269217 - 7269173
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  7269217 cttaaggtgtgtttggtttataagagaaattgtgaagagaaaaat 7269173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 44385399 - 44385359
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  44385399 ttagggtttgtttggtttggaagagaagctgtgaagagaga 44385359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 45339727 - 45339683
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||  || ||||| ||||||||||||||||    
T  45339727 cttagggtgtgtttggttgtgaggagaaattgtgaagagagaaat 45339683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 33099738 - 33099697
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33099738 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 33099697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 43325448 - 43325489
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43325448 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 43325489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 2116653 - 2116610
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  2116653 ttagggtgtgtttggtttggaagagaagttgtgaagagagaaat 2116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 9579434 - 9579396
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9579434 gtgtgtttggtttagaagagaagttgtgaagagagaaat 9579396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 9200237 - 9200278
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  9200237 agggtgtgttaggtttagaagagaagttgtgaagagagaaat 9200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 3547236 - 3547275
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  3547236 ggtgtgtttggtttggaagagaagttgtgaagagagaaat 3547275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 8747879 - 8747921
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  8747879 ttagggtgtgtttggtttacaagagaaattgtgaagagagaaa 8747921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 44061187 - 44061225
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  44061187 ggtgtgtttggtttggaagagaagttgtgaagagagaaa 44061225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 25563092 - 25563129
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  25563092 tgtgttttgtttagaagagaagttgtgaagagagaaat 25563129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 30266141 - 30266097
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||    
T  30266141 cttatggtttgtttggttaagaagagaagttgtgaagagagaaat 30266097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 12845714 - 12845675
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  12845714 ggtgtgtttggtgtggaagagaagttgtgaagagagaaat 12845675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 18753961 - 18753996
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18753961 tgtgtttggtttagaagagaagttgagaagagagaa 18753996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 31666158 - 31666201
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||    
T  31666158 ttagggtgtgtttggtttggaagagaagatgtcaagagagaaat 31666201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 33449445 - 33449492
Alignment:
Q  173 tcacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  33449445 tcacttagtgtgtgtttggtttggaagataagttatgaagagagaaat 33449492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 13884858 - 13884899
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| || |||||||| |||||||||||||    
T  13884858 agggtgtgtttggtttggaggagaagttatgaagagagaaat 13884899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 9636344 - 9636308
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  9636344 gtgtgtttggtatagaagagaagttgcgaagagagaa 9636308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 22914580 - 22914540
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| ||||||||||| ||| |||||||||||    
T  22914580 gggtgtgtttggtgtagaagagaagatgtaaagagagaaat 22914540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 41322106 - 41322065
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41322106 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 41322065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 39640449 - 39640493
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  39640449 cacttagggtgtgtttggtttaaaagagaagttgtgaagagagaa 39640493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 38376576 - 38376533
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  38376576 ttagggtgtgtttggtgtagaagagaagttgtgaagagagaaat 38376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 42578624 - 42578581
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  42578624 ttagggtatgtttggtttagaagagaagttgtgaagagagaaat 42578581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 4843508 - 4843468
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  4843508 gggtgtgtttggtttagaagagaaattgtgaagagagaaat 4843468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 9225238 - 9225199
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9225238 ggtgtgtttggtttagaagagaagttgggaagagagaaat 9225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 37472174 - 37472220
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  37472174 cactttgggtgtgtttggtttggaagacaagttgtgaagagagaaat 37472220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 3207207 - 3207248
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  3207207 agggtatgtttggtttggaagagaagttgtgaagagagaaat 3207248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 27337184 - 27337225
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  27337184 agggtatgtttggtttggaagagaagttgtgaagagagaaat 27337225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 31570504 - 31570463
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  31570504 agggtgtgtttggtttaggagagaagtcgtgaagagagaaat 31570463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 725218 - 725179
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  725218 ggtgtgtttggtttataggagaagttgtgaagagagaaat 725179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 2020135 - 2020174
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  2020135 ggtgtgcttggtttagaagagaagatgtgaagagagaaat 2020174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 2317619 - 2317654
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2317619 gtgtgtttggtttaggagagaagttgtgaagagaga 2317654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 3462599 - 3462634
Alignment:
Q  185 tgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||| ||||||||||||||||||||||||||    
T  3462599 tgtttggttaagaagagaagttgtgaagagagaaat 3462634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 9273106 - 9273067
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  9273106 ggtgtgtttgatttagaagagaagttgggaagagagaaat 9273067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 10913453 - 10913492
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  10913453 ggtgtgtttggtgtggaagagaagttgtgaagagagaaat 10913492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 39676226 - 39676269
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  39676226 ttagggtgtgtttggttcagaagagaagttggaaagagagaaat 39676269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 13070456 - 13070497
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||  |||||||| ||||||||||||||||    
T  13070456 agggtgtgtttggttgtgaagagaaattgtgaagagagaaat 13070497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 3711422 - 3711466
Alignment:
Q  175 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  3711422 acttagggtgtgtttggtttggaagagaagttgtgaagagagaaa 3711466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 251795 - 251838
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  251795 ttagggtgtgtttggtttggaagagaagttgtgaagagagaaat 251838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 7341355 - 7341317
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  7341355 gtgtgtttggtttggaagagaaattgtgaagagagaaat 7341317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 28470629 - 28470591
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  28470629 ggtgtgtttagtttataagagaagttgtgaagagagaaa 28470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 11577722 - 11577686
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagaga 215  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  11577722 agggtgtgtttgatttaggagagaagttgtgaagaga 11577686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 1157119 - 1157079
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1157119 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 1157079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 17888422 - 17888379
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  17888422 ttagggtgtgtttggtttagaagagaaattgtgaagagagaaat 17888379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 39039803 - 39039846
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaattg 222  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  39039803 agggtgtgtttggtttagaagagaagatgtgaagagagaaattg 39039846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 233412 - 233458
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  233412 cactaagggtatgtttggtttagaagagaagttgtgaagagagaaat 233458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 11447367 - 11447326
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  11447367 agggtgtgtttggtttggaagagaagttgtgaagagagaaat 11447326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 19962475 - 19962516
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  19962475 agggtgtgtttggtttagaagagaagttctgaagagagaaat 19962516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 27878590 - 27878635
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  27878590 cacttagggtgtgtttggtttggaagagaaattgtgaagagagaaa 27878635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 8223814 - 8223853
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8223814 ggtgtgtttggttaagaagagaagttgtgaagagagaaat 8223853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 2683685 - 2683727
Alignment:
Q  178 tagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  2683685 tagggtgtgtttggtttagaagagaagttatgaagagataaat 2683727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 9780160 - 9780202
Alignment:
Q  178 tagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  9780160 tagggtgtgtttggtttataagagaagttgtgaagatagaaat 9780202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 26078250 - 26078213
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26078250 tgtgtttggtttagaagagaagtcgtgaagagagaaat 26078213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 38503509 - 38503550
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  38503509 ttagggtgtgtttggtttggaagagaagttgagaagagagaa 38503550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 28905678 - 28905635
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  28905678 ttagggtgtgtttggtttataagagaagttaagaagagagaaat 28905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 28942073 - 28942030
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  28942073 ttagggtgtgtttggtttataagagaagttaagaagagagaaat 28942030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 37226168 - 37226126
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    |||||||||||||||||| |||||||| ||| |||||||||||    
T  37226168 ttagggtgtgtttggtttggaagagaatttgcgaagagagaaa 37226126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 39164417 - 39164459
Alignment:
Q  179 agggtgtgtttggtttagaa-gagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  39164417 agggtgtgtttggttaagaaagagaagttgtgaagagagaaat 39164459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 8205962 - 8205921
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| | ||| |||||||||||||||||||    
T  8205962 agggtgtgtttggtttgggagaaaagttgtgaagagagaaat 8205921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26647879 - 26647842
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagag 216  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  26647879 agggtgtgtttggtttggaagagaagttgtgaaaagag 26647842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26919464 - 26919427
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagag 216  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  26919464 agggtgtgtttggtttggaagagaagttgtgaaaagag 26919427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 29801653 - 29801694
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||||||||||||||||| ||||| |||||| ||||||||||    
T  29801653 ttagggtgtgtttggtttggaagaaaagttgagaagagagaa 29801694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 11240779 - 11240735
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  11240779 cttagggtgtgtttggtttagaggagaagttgtgaagagagaaat 11240735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 29232684 - 29232641
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaa 219  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  29232684 cttagggtgtgtttggtttaggagagaagttgtgaagagagaaa 29232641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 50372771 - 50372814
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  50372771 ttagggtgtgtttggtttagaagagaatttgtgaagagagaaat 50372814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 2167846 - 2167805
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  2167846 agggtgtgtttggtttggaagagaagttgtgaagagagaaat 2167805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 10617380 - 10617335
Alignment:
Q  175 acttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  10617380 acttagggtgtgtttggtatggaagagaagttgtgaagagagaaat 10617335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 46085521 - 46085562
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  46085521 agggtgtgtttggtttagaagagaagttatgaagagagaaat 46085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 36184815 - 36184775
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  36184815 gggtgtgtttggtttagaagagaagttgtgaagagaaaaat 36184775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 45707960 - 45708000
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  45707960 gggtgtgtttggtttggaagagaagttgtgaagagagaaat 45708000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 11386386 - 11386425
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  11386386 ggtgtgtttggtttagaagagacgttgtgaagagagaaat 11386425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 34918505 - 34918462
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  34918505 ttagggtgtgtttggtttaggagagaagttgtgaatagagaaat 34918462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 43360268 - 43360311
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  43360268 ttagggtatgtttggtttggaagagaagttgtgaagagagaaat 43360311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 45337545 - 45337584
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  45337545 ggtgtgtttggtttagaagagatgttgtgaagagagaaat 45337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 27803282 - 27803244
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27803282 gtgtgtttggtttagaagagaagttgtaaagagagaaat 27803244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 29733348 - 29733302
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||    
T  29733348 cactaagggtgtgtttggtatggaagagaagttgtgaagagagaaat 29733302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 30720902 - 30720948
Alignment:
Q  174 cacttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||    
T  30720902 cacttagggtgtgtttggtgtataagaaaagttgtgaagagagaaat 30720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 46600185 - 46600223
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  46600185 agggtgtgtttggtttagaagagaagttatgaagagaga 46600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 13703315 - 13703278
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13703315 tgtgtttggtttggaagagaagttgtgaagagagaaat 13703278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 23202051 - 23202010
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  23202051 agggtatgtttggtttggaagagaagttgtgaagagagaaat 23202010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 30724587 - 30724628
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  30724587 agggtgtgtttggtttggaagagaagttgtaaagagagaaat 30724628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 26940479 - 26940435
Alignment:
Q  176 cttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||    
T  26940479 cttagggtatgtttggtttggaagagaagttgtgaagatagaaat 26940435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 16660125 - 16660082
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  16660125 ttagggtgtgtttggtttataagagaagttaagaagagagaaat 16660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 38674172 - 38674210
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  38674172 gtgtgtttgatgtagaagagaagttgtgaagagagaaat 38674210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 5510343 - 5510384
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||    
T  5510343 agggtgtgtttggttgagaagagaaattgtgaagagataaat 5510384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 19727771 - 19727812
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  19727771 agggtgtgtttggttctcaagagaagttgtgaagagagaaat 19727812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 32454677 - 32454636
Alignment:
Q  179 agggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||| |||||||| ||||||||| ||||||    
T  32454677 agggtgtgtttggtttggaagagaaattgtgaagaaagaaat 32454636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 51048239 - 51048198
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaa 218  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  51048239 ttagggtgtgtttggtatagaagagaaattgtaaagagagaa 51048198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 46510 - 46553
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  46510 ttagggtgtgtttggtttggaagagaagttgtgaagagagaaat 46553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 44388 - 44428
Alignment:
Q  180 gggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44388 gggtgtgtttggtttagaagtgaagttgtgaagagagaaat 44428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 1486 - 1525
Alignment:
Q  181 ggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1486 ggtgtgtttggtttagaagagaagttgtgaagagataaat 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 105521 - 105565
Alignment:
Q  173 tcacttagggtgtgtttggtttagaagagaagttgtgaagagaga 217  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||    
T  105521 tcactaagggtgtgtttcgtttagaagagaaattgtgaagagaga 105565  T

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Target: scaffold0069 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 35962 - 36000
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35962 gtgtgtttggtttggaagagaagttgtgaagagagaaat 36000  T

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Target: scaffold0287 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 13032 - 13069
Alignment:
Q  183 tgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13032 tgtgtttggtgtagaagagaagttgtgaagagagaaat 13069  T

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Target: scaffold0385 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 11950 - 11908
Alignment:
Q  177 ttagggtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  11950 ttagggtgtgtttggttg-gaagagaagttgtgaagagagaaat 11908  T

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Target: scaffold0459 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 12341 - 12379
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  12341 gtgtgtttggtttggaagagaaattgtgaagagagaaat 12379  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 9982 - 10020
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  9982 gtgtgtttggtttggaagagaaattgtgaagagagaaat 10020  T

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Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 13648 - 13686
Alignment:
Q  182 gtgtgtttggtttagaagagaagttgtgaagagagaaat 220  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  13648 gtgtgtttggtttggaagagaaattgtgaagagagaaat 13686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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