View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2270_low_36 (Length: 210)
Name: NF2270_low_36
Description: NF2270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2270_low_36 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 5940876 - 5941060
Alignment:
| Q |
26 |
gcctcccattctcacccttaaatctcgacatcgccaccatcaccctcatatttaacatcaccatcgcccaccatcctcctcctcaccgttctcctactac |
125 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5940876 |
gcctcccattctcacccttaaatctcgacatcaccaccatcaccctcatatttaacatcaccatcgcccaccatcctcctcctcaccgttctcctactac |
5940975 |
T |
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| Q |
126 |
caccattaccattgtcctcctcaccaccatccatcctcatcagacaccaccctcttctattacgaacccctcttctcccttatac |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
5940976 |
caccattaccattgtcctcctcaccaccatccatcctcatcagacaccaccctcttctataacgaacccctcttctcccttatac |
5941060 |
T |
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