View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2272_high_18 (Length: 530)

Name: NF2272_high_18
Description: NF2272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2272_high_18
NF2272_high_18
[»] chr2 (41 HSPs)
chr2 (3-516)||(6883420-6883933)
chr2 (329-438)||(38422421-38422530)
chr2 (390-516)||(25415782-25415916)
chr2 (337-420)||(14904265-14904348)
chr2 (106-209)||(31548771-31548874)
chr2 (101-181)||(7444042-7444122)
chr2 (332-394)||(90196-90258)
chr2 (106-210)||(14904500-14904604)
chr2 (360-439)||(43672827-43672906)
chr2 (335-412)||(25621687-25621764)
chr2 (263-328)||(90073-90138)
chr2 (101-209)||(6221478-6221587)
chr2 (263-328)||(6271348-6271413)
chr2 (263-328)||(19678324-19678389)
chr2 (101-209)||(33015096-33015205)
chr2 (106-189)||(41302198-41302278)
chr2 (101-209)||(44313946-44314055)
chr2 (263-328)||(45277244-45277309)
chr2 (101-209)||(2554148-2554256)
chr2 (267-331)||(2565887-2565951)
chr2 (267-331)||(18780921-18780985)
chr2 (267-331)||(25621821-25621885)
chr2 (113-177)||(25621946-25622010)
chr2 (106-209)||(22575893-22575996)
chr2 (106-165)||(38565976-38566035)
chr2 (107-169)||(19090882-19090944)
chr2 (263-321)||(29303471-29303529)
chr2 (263-328)||(7880101-7880166)
chr2 (101-210)||(19678443-19678552)
chr2 (101-209)||(44322125-44322234)
chr2 (101-177)||(11198901-11198977)
chr2 (114-180)||(24484757-24484820)
chr2 (101-181)||(41825868-41825948)
chr2 (464-516)||(43672943-43672995)
chr2 (154-209)||(27861778-27861833)
chr2 (332-394)||(29303342-29303405)
chr2 (398-448)||(10023368-10023418)
chr2 (101-210)||(45277081-45277190)
chr2 (114-210)||(7879951-7880047)
chr2 (461-516)||(10023294-10023347)
chr2 (114-188)||(25415328-25415399)
[»] chr5 (36 HSPs)
chr5 (333-516)||(5120688-5120882)
chr5 (101-209)||(13820515-13820623)
chr5 (109-180)||(37135206-37135277)
chr5 (113-237)||(5120416-5120540)
chr5 (101-209)||(13490482-13490590)
chr5 (360-448)||(23318189-23318277)
chr5 (106-210)||(43170930-43171034)
chr5 (106-181)||(16686645-16686720)
chr5 (106-209)||(29150689-29150792)
chr5 (332-394)||(14651604-14651666)
chr5 (106-179)||(29789919-29789992)
chr5 (106-209)||(39537308-39537411)
chr5 (263-330)||(43171059-43171126)
chr5 (335-420)||(43171184-43171267)
chr5 (101-209)||(5578512-5578620)
chr5 (263-325)||(5120567-5120629)
chr5 (263-328)||(7850602-7850667)
chr5 (263-328)||(14651482-14651547)
chr5 (101-209)||(23962942-23963051)
chr5 (263-328)||(38491334-38491399)
chr5 (136-208)||(26402367-26402439)
chr5 (101-207)||(13825862-13825966)
chr5 (461-516)||(33922293-33922348)
chr5 (113-183)||(8805935-8806004)
chr5 (111-209)||(20891041-20891139)
chr5 (101-209)||(2677056-2677165)
chr5 (101-181)||(13382503-13382584)
chr5 (106-175)||(16039915-16039983)
chr5 (101-209)||(18889160-18889269)
chr5 (282-331)||(26402247-26402296)
chr5 (336-388)||(26402140-26402192)
chr5 (332-394)||(7850480-7850543)
chr5 (462-516)||(37135131-37135183)
chr5 (111-181)||(42879715-42879785)
chr5 (460-516)||(23318297-23318353)
chr5 (114-210)||(38491453-38491549)
[»] chr7 (36 HSPs)
chr7 (342-515)||(39038433-39038614)
chr7 (335-516)||(43178761-43178950)
chr7 (106-210)||(21863950-21864054)
chr7 (106-209)||(35477886-35477989)
chr7 (332-444)||(23305442-23305548)
chr7 (264-331)||(43178641-43178708)
chr7 (101-207)||(20394689-20394795)
chr7 (263-331)||(8113542-8113610)
chr7 (106-209)||(9420771-9420874)
chr7 (106-209)||(13754207-13754310)
chr7 (107-209)||(18667460-18667562)
chr7 (101-209)||(4539953-4540062)
chr7 (263-328)||(6195661-6195726)
chr7 (106-210)||(8113414-8113517)
chr7 (101-181)||(24441565-24441645)
chr7 (106-211)||(39038156-39038258)
chr7 (332-394)||(19311807-19311869)
chr7 (263-328)||(6189145-6189210)
chr7 (263-328)||(8069870-8069935)
chr7 (263-328)||(19311684-19311749)
chr7 (263-328)||(48636990-48637055)
chr7 (114-210)||(48238865-48238961)
chr7 (263-333)||(24441699-24441770)
chr7 (111-210)||(43178516-43178615)
chr7 (263-326)||(48238748-48238811)
chr7 (115-181)||(3123684-3123750)
chr7 (334-420)||(8113692-8113778)
chr7 (101-209)||(8389202-8389311)
chr7 (106-211)||(14574175-14574280)
chr7 (114-210)||(8069989-8070085)
chr7 (465-517)||(14554617-14554669)
chr7 (332-394)||(6189269-6189332)
chr7 (332-394)||(48238625-48238688)
chr7 (332-394)||(48636868-48636931)
chr7 (106-210)||(31072432-31072537)
chr7 (267-331)||(39038308-39038369)
[»] chr1 (29 HSPs)
chr1 (349-448)||(12783780-12783879)
chr1 (101-181)||(44310768-44310848)
chr1 (335-448)||(47397293-47397401)
chr1 (106-177)||(42055724-42055795)
chr1 (106-177)||(9023548-9023619)
chr1 (263-321)||(47397163-47397221)
chr1 (101-209)||(21906471-21906580)
chr1 (263-331)||(12028128-12028196)
chr1 (106-210)||(12028221-12028325)
chr1 (106-177)||(48646424-48646495)
chr1 (106-176)||(5208352-5208422)
chr1 (101-209)||(22070595-22070704)
chr1 (263-328)||(28945553-28945618)
chr1 (101-181)||(34307349-34307430)
chr1 (263-328)||(36296990-36297055)
chr1 (263-328)||(42722525-42722590)
chr1 (101-210)||(12783460-12783573)
chr1 (101-169)||(23664011-23664079)
chr1 (267-331)||(26221975-26222039)
chr1 (101-208)||(48596255-48596363)
chr1 (263-331)||(49228383-49228451)
chr1 (101-209)||(17967227-17967336)
chr1 (101-209)||(26465169-26465278)
chr1 (333-385)||(5208553-5208605)
chr1 (263-331)||(48646294-48646362)
chr1 (332-394)||(36296868-36296931)
chr1 (332-394)||(42722403-42722466)
chr1 (114-208)||(26222104-26222198)
chr1 (101-209)||(5049547-5049656)
[»] chr4 (33 HSPs)
chr4 (333-420)||(13957478-13957565)
chr4 (337-412)||(42511503-42511578)
chr4 (106-211)||(10142607-10142712)
chr4 (338-494)||(25201460-25201621)
chr4 (332-438)||(51758687-51758793)
chr4 (101-177)||(3665052-3665128)
chr4 (101-209)||(52460633-52460742)
chr4 (101-181)||(31915588-31915668)
chr4 (106-177)||(25201790-25201861)
chr4 (263-331)||(13957620-13957688)
chr4 (263-329)||(10142517-10142583)
chr4 (101-211)||(51758941-51759046)
chr4 (101-209)||(10094925-10095034)
chr4 (106-210)||(13957713-13957815)
chr4 (106-175)||(21320327-21320395)
chr4 (263-328)||(51337939-51338004)
chr4 (267-331)||(14192062-14192126)
chr4 (106-181)||(36213852-36213927)
chr4 (106-164)||(9921605-9921663)
chr4 (360-446)||(20152094-20152180)
chr4 (101-209)||(7413647-7413756)
chr4 (101-209)||(7459728-7459837)
chr4 (263-328)||(28143189-28143254)
chr4 (101-209)||(28803797-28803906)
chr4 (333-411)||(10142389-10142460)
chr4 (263-331)||(25201681-25201749)
chr4 (106-181)||(39480160-39480235)
chr4 (332-394)||(51337817-51337880)
chr4 (108-174)||(24611000-24611065)
chr4 (140-210)||(42511284-42511354)
chr4 (107-152)||(1842912-1842957)
chr4 (464-516)||(20152206-20152258)
chr4 (263-331)||(42511379-42511446)
[»] scaffold0178 (1 HSPs)
scaffold0178 (333-420)||(1017-1104)
[»] chr8 (29 HSPs)
chr8 (333-517)||(11648271-11648463)
chr8 (113-210)||(9381756-9381853)
chr8 (333-516)||(960845-961034)
chr8 (106-209)||(7263541-7263644)
chr8 (101-185)||(602034-602118)
chr8 (332-446)||(24683101-24683209)
chr8 (263-331)||(11648150-11648218)
chr8 (106-205)||(16729826-16729925)
chr8 (263-331)||(602168-602236)
chr8 (333-420)||(9381977-9382062)
chr8 (114-210)||(23231913-23232009)
chr8 (332-394)||(11994579-11994641)
chr8 (106-152)||(28374283-28374329)
chr8 (101-209)||(1981688-1981797)
chr8 (263-328)||(6927299-6927364)
chr8 (263-328)||(11994456-11994521)
chr8 (263-328)||(28509548-28509613)
chr8 (263-328)||(28516755-28516820)
chr8 (106-210)||(11648021-11648125)
chr8 (333-401)||(32073432-32073499)
chr8 (101-181)||(31597642-31597723)
chr8 (101-209)||(45117558-45117667)
chr8 (267-331)||(960725-960789)
chr8 (267-331)||(2878954-2879018)
chr8 (106-181)||(7972890-7972965)
chr8 (101-147)||(35824271-35824317)
chr8 (107-148)||(24190099-24190140)
chr8 (114-210)||(6927149-6927245)
chr8 (114-210)||(28516874-28516970)
[»] chr3 (20 HSPs)
chr3 (106-210)||(44879910-44880014)
chr3 (333-420)||(47185206-47185293)
chr3 (101-209)||(3917607-3917715)
chr3 (106-209)||(52448235-52448338)
chr3 (106-206)||(33100339-33100439)
chr3 (106-180)||(47185471-47185545)
chr3 (101-209)||(19157185-19157294)
chr3 (263-328)||(23044638-23044703)
chr3 (263-328)||(31884698-31884763)
chr3 (267-331)||(6024502-6024566)
chr3 (263-331)||(47185348-47185416)
chr3 (101-209)||(10994052-10994161)
chr3 (101-181)||(25071763-25071844)
chr3 (101-209)||(27941419-27941528)
chr3 (101-209)||(53076871-53076980)
chr3 (332-394)||(23044762-23044825)
chr3 (111-165)||(29714097-29714151)
chr3 (108-183)||(10992836-10992908)
chr3 (106-174)||(12893428-12893496)
chr3 (114-210)||(31884548-31884644)
[»] chr6 (29 HSPs)
chr6 (335-516)||(1830818-1831007)
chr6 (106-208)||(13758494-13758596)
chr6 (352-420)||(11680652-11680720)
chr6 (101-181)||(15060263-15060343)
chr6 (101-183)||(15603681-15603763)
chr6 (79-181)||(26817739-26817841)
chr6 (106-209)||(20990531-20990634)
chr6 (332-394)||(14677904-14677966)
chr6 (101-209)||(18675445-18675553)
chr6 (279-333)||(1831135-1831189)
chr6 (101-177)||(1423079-1423155)
chr6 (106-178)||(30359770-30359842)
chr6 (264-330)||(11680511-11680577)
chr6 (263-328)||(33516368-33516433)
chr6 (101-209)||(34043636-34043745)
chr6 (264-328)||(14678024-14678088)
chr6 (106-178)||(30358953-30359025)
chr6 (136-207)||(1831233-1831304)
chr6 (106-181)||(11680382-11680456)
chr6 (136-178)||(1131897-1131939)
chr6 (101-209)||(1603461-1603570)
chr6 (330-391)||(4065096-4065157)
chr6 (359-420)||(14679197-14679258)
chr6 (101-209)||(21442729-21442838)
chr6 (101-209)||(22012019-22012128)
chr6 (106-180)||(22524995-22525066)
chr6 (290-329)||(1831063-1831102)
chr6 (104-158)||(1213124-1213178)
chr6 (114-210)||(33516218-33516314)
[»] scaffold1266 (1 HSPs)
scaffold1266 (106-210)||(1664-1768)
[»] scaffold0385 (1 HSPs)
scaffold0385 (106-204)||(1065-1163)
[»] scaffold0743 (1 HSPs)
scaffold0743 (263-328)||(2550-2615)
[»] scaffold1364 (1 HSPs)
scaffold1364 (106-210)||(1198-1302)
[»] scaffold0137 (1 HSPs)
scaffold0137 (101-209)||(21083-21190)
[»] scaffold0116 (1 HSPs)
scaffold0116 (114-180)||(41096-41159)
[»] scaffold0263 (1 HSPs)
scaffold0263 (132-210)||(18276-18354)
[»] scaffold0229 (1 HSPs)
scaffold0229 (104-158)||(14287-14341)


Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-175; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 3 - 516
Target Start/End: Complemental strand, 6883933 - 6883420
Alignment:
Q  3 ggcttcttacataatacatcatcnnnnnnntcagctcattattgtatttttattagttcttcatttcannnnnnncactatcaaataaatgnnnnnnnag 102  Q
    |||||||||||||||||||||||       | |||||||  |||||||||||||||||||||||||||        |||| ||||||||||       ||    
T  6883933 ggcttcttacataatacatcatcaaaaaaattagctcatcgttgtatttttattagttcttcatttcatttttttgactaccaaataaatgttcttttag 6883834  T
Q  103 actacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattt 202  Q
     | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  6883833 gcaacatctgaaaataaatcaaatactccatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagtacctatgaaacagactaaaattt 6883734  T
Q  203 tagcacctggagattagaaactcgaattttagcacctnnnnnnnnnnnnnnnnnnnnngtaaagtatatcaacacataattaattacattttaaattttt 302  Q
    |||||||||||||||||||||||||||||||||||||                     |||||||||||||||||||||||||||| |||||||||||||    
T  6883733 tagcacctggagattagaaactcgaattttagcacctaaaaataaaaacacaaaacaagtaaagtatatcaacacataattaattaaattttaaattttt 6883634  T
Q  303 ggatagaaaattctccaatgttaaactcaaagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaac 402  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6883633 ggatagaaaattctccaatgttaaactcatagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaac 6883534  T
Q  403 aagttcattacgatgatataaaatcaacgttagactgttgttaaaaacgtatctttgatttagcacacttaataatttatatcaataattttaccacact 502  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6883533 aagttcattatgatgatataaaatcaatgttcgaccgttgttaaaagcgtatctttgatttagcacacttaataatttatatcaataattttaccacact 6883434  T
Q  503 tatggtaagaaatt 516  Q
    |||| |||||||||    
T  6883433 tatgataagaaatt 6883420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 38422421 - 38422530
Alignment:
Q  329 tcaaagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatca 428  Q
    |||||||||| ||||||| ||| |||  || ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| || ||||    
T  38422421 tcaaagatactagaactcctttatatgttacaagtacatcattcctctttttatatgctacaagtatctctatcaagttcattgtgatgatacaatatca 38422520  T
Q  429 acgttagact 438  Q
      ||||||||    
T  38422521 gtgttagact 38422530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 390 - 516
Target Start/End: Original strand, 25415782 - 25415916
Alignment:
Q  390 aagtatctctaacaagttcattacgatgatataaaatcaacgttagactgttgttaaaaacgtatctt------tga--tttagcacacttaataattta 481  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||||  ||| |||      |||  ||||| |||||||| ||||||    
T  25415782 aagtatctctaacaagttcattatgatgatacaaaatcaatgttagattgttgttaaaagtgtaccttcaaagatgaattttagtacacttaaaaattta 25415881  T
Q  482 tatcaataattttaccacacttatggtaagaaatt 516  Q
    ||||||||| |||| |||||||||| |||||||||    
T  25415882 tatcaataactttatcacacttatgataagaaatt 25415916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 14904348 - 14904265
Alignment:
Q  337 acaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||| ||||||||| ||||||| ||||| |||| ||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  14904348 acaataactcatttatatactataagtatatcactcctctttttatatgttataagtatctctaacaagttcattatgatgata 14904265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 31548771 - 31548874
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||||||||||   ||| ||||||||||||||||| ||||| |||||||||||||||||||||| | ||||  ||||| ||||||||     
T  31548771 acatatgaaaataaatcaaatactttataaacaccaaaacaaaataaaatatcatagaagtagagaacaatagcacttgcgaagtagactgaaattttac 31548870  T
Q  206 cacc 209  Q
    ||||    
T  31548871 cacc 31548874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 7444122 - 7444042
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| ||||||   ||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  7444122 agacaacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcac 7444042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 90196 - 90258
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  90196 aagatacaataactcatttgtatactacaaataaatcattcctctttttatatgctacaagta 90258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 14904604 - 14904500
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||| ||||||||||||||  | |||||||||||||||| ||||| ||||| |||||||| |||| |||||||| ||| ||| |  ||||||| ||||    
T  14904604 acatctcaaaataaatcaaatgtctcatagacaccaaaacataataaaatatcatagaagtatagaataatagcacatacaaaataagctaaaatattag 14904505  T
Q  206 cacct 210  Q
    |||||    
T  14904504 cacct 14904500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 43672827 - 43672906
Alignment:
Q  360 aagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagactg 439  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||| ||||||  ||||||| || ||||| |||||||||    
T  43672827 aagtacatcattcctctttttatatgctgcaagtatttctatcaaattcattgtgatgatacaatatcaatgttagactg 43672906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 25621764 - 25621687
Alignment:
Q  335 atacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcatta 412  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||| |||| || |  |||||||||||| |||||||    
T  25621764 atacaataactcatttgtatactggaagtacatcattcctctttttctatgatatacatatctctaacaacttcatta 25621687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 90073 - 90138
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| ||||||||||||| ||||||    
T  90073 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaattttaaac 90138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 6221587 - 6221478
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  6221587 agacaacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 6221488  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  6221487 ttttagcacc 6221478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 6271348 - 6271413
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  6271348 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 6271413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 19678389 - 19678324
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  19678389 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 19678324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 33015096 - 33015205
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  33015096 agacaacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 33015195  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  33015196 ttttagcacc 33015205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 41302198 - 41302278
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaa 189  Q
    |||||||||||||||||||| ||   ||||||||||||||||| ||| ||| ||||||   ||||||||||||||||| |||||    
T  41302198 acatctgaaaataaatcaaaaactttatagacaccaaaacaaattaaaataccgtaga---agagaacaatagcacctgcgaaa 41302278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 44313946 - 44314055
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaat-aagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||  | ||| ||||||||||||||| || ||| ||||||||||||||| |||||||  |  |||  ||||| |||    
T  44313946 agacaacatctgaaaataaattaaatattatatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcaaatgtgaagtagactgaaa 44314045  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  44314046 ttttagcacc 44314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 45277244 - 45277309
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  45277244 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 45277309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 2554256 - 2554148
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||| | ||||| || |||||||||| |||||||| |  |||  ||||| ||||    
T  2554256 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaatgaaatatcctacaagtagagaaaaatagcacatgtgaagtagactgaaat 2554157  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  2554156 tttagcacc 2554148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 2565951 - 2565887
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| |||||||||||||||||||||||    
T  2565951 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatgttaaactca 2565887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 18780921 - 18780985
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| |||||||||||||||||||||||    
T  18780921 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatgttaaactca 18780985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 25621885 - 25621821
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| |||||| ||| |||||||| |||||||   |||||||||||||||||||||||    
T  25621885 tatatcaacacgtaattagttaaattttaaacttttggaagcaaaattctccaatgttaaactca 25621821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 25622010 - 25621946
Alignment:
Q  113 aaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    ||||||||||| ||||  |||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  25622010 aaaataaatcagatacttcataaacaccaaaacaaaataaaatatcgtaaaagtatagaacaata 25621946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 22575893 - 22575996
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||| ||||||   ||| ||| ||||||||||||| ||| |||||| |||||||| |||||||| | | ||  | |||||||||||||    
T  22575893 acatatgaaaataaattaaatactctatatacaacaaaacaaaataaaataccgtagatgtagagaaaaatagcacattcaaagtaaactaaaattttag 22575992  T
Q  206 cacc 209  Q
    ||||    
T  22575993 cacc 22575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 38565976 - 38566035
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaag 165  Q
    |||||||||||||||||||||||   |||||||||||||||||| || ||| ||||||||    
T  38565976 acatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 38566035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 19090882 - 19090944
Alignment:
Q  107 catctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtaga 169  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||| ||  ||||||||||||    
T  19090882 catctgaaaataaatcaaatactttatagacaccgaaacaaaataaaatgccgtagaagtaga 19090944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 29303529 - 29303471
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaat 321  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||    
T  29303529 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaat 29303471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 7880101 - 7880166
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||| ||| |||||| |  |||||||| |||||||||||||| |||||    
T  7880101 aaagtatatcaacacgtaattagttaaattttagacatttggatacaaaattctccaatgctaaac 7880166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 19678552 - 19678443
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| ||||||  |||||||||||||||  |||||| |||||||| ||| || ||| | ||| | ||||||||||||||  || |||| || ||| ||||    
T  19678552 agacaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaataccataggattagagaacaatagcttctccgaagcaaactgaaat 19678453  T
Q  201 tttagcacct 210  Q
    ||||||||||    
T  19678452 tttagcacct 19678443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 44322125 - 44322234
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaat-aagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||| || ||| ||||||||||||||| |||||||  |  |||  ||||| |||    
T  44322125 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcatatgtgaagtagactgaaa 44322224  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  44322225 ttttagcacc 44322234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 11198901 - 11198977
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    |||| |||||| ||||||||||||||||   ||| ||||||||  ||||||| ||| |||| |||||||||||||||    
T  11198901 agacaacatctaaaaataaatcaaatactctatatacaccaaagtaaaataaaatagcgtaaaagtagagaacaata 11198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 24484820 - 24484757
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagca 180  Q
    |||||||||||||||   ||||||||||||||||||||| ||| ||||||   ||||||||||||||    
T  24484820 aaataaatcaaatactttatagacaccaaaacaaaataaaataccgtaga---agagaacaatagca 24484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 41825868 - 41825948
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||| | ||||| || |||||||||| ||||||||    
T  41825868 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaatgaaatatcctacaagtagagaaaaatagcac 41825948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 43672943 - 43672995
Alignment:
Q  464 agcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    |||||||||||| |||||||||||||||||||  ||||||||| |||| ||||    
T  43672943 agcacacttaatcatttatatcaataattttatgacacttatgataagtaatt 43672995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 27861778 - 27861833
Alignment:
Q  154 atatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacc 209  Q
    ||||||||||||||||||| |||||||| | ||||  ||||| |||||||||||||    
T  27861778 atatcgtagaagtagagaaaaatagcacatgcgaagtagactgaaattttagcacc 27861833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 29303405 - 29303342
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  29303405 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 29303342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 10023418 - 10023368
Alignment:
Q  398 ctaacaagttcattacgatgatataaaatcaacgttagactgttgttaaaa 448  Q
    ||||||||||||||| ||||||| |||||||| |||||| || ||||||||    
T  10023418 ctaacaagttcattatgatgatacaaaatcaatgttagattgatgttaaaa 10023368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 45277081 - 45277190
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| ||||||  |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||    
T  45277081 agacaacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttctccgaagtagactgaaat 45277180  T
Q  201 tttagcacct 210  Q
    ||||||||||    
T  45277181 tttagcacct 45277190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 7879951 - 7880047
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  7879951 aaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttctccgaagtagactgaaattttagcacct 7880047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 516
Target Start/End: Complemental strand, 10023347 - 10023294
Alignment:
Q  461 tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    |||||||||||| |||| ||||  ||||||||||| |||||||||| |||||||||    
T  10023347 tttagcacacttcataacttat--caataattttatcacacttatgataagaaatt 10023294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 25415328 - 25415399
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaa 188  Q
    ||||||||||||| |  |||||||||   |||||||||| ||| |||| ||||| |||||||||||| |||||||    
T  25415328 aaataaatcaaatgcttcatagacac---aacaaaataaaataccgtaaaagtatagaacaatagcatctacgaa 25415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 333 - 516
Target Start/End: Original strand, 5120688 - 5120882
Alignment:
Q  333 agatacaagaact---catttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaa 429  Q
    |||||||||||||   ||||||||| ||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||  |||||| || |||||    
T  5120688 agatacaagaactgatcatttgtatgctagaagtacaccattcctctttttatatgatataagtatctctaacaagttcattataatgatagaatatcaa 5120787  T
Q  430 cgttagactgttgttaaaaacgtatctt------tga--tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
     |||| |||||||||||||  ||| |||      |||  |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  5120788 tgttaaactgttgttaaaagtgtaccttcaaatgtgaattttagcacacttgataatttatatcaataattttatcacacttatgataagaaatt 5120882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 13820515 - 13820623
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| | ||| |  |||  ||||| ||||    
T  13820515 agacaacatctgaaaacaaatcaaatacctcatagacaccaaaacaaaataaaataccgtagaagtagagaacaacaacacatgtgaagtagactgaaat 13820614  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  13820615 tttagcacc 13820623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 37135277 - 37135206
Alignment:
Q  109 tctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagca 180  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  37135277 tctgaaaataaatcaaatactccatagacaccaaaacaacataaaatatcttagaagtagagaacaatagca 37135206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 5120416 - 5120540
Alignment:
Q  113 aaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacctgg 212  Q
    |||||||||| |||||  |||| ||||||||||||||||| ||| |||||||||| ||||||||||||  ||| ||  ||||| |||||||| ||||||     
T  5120416 aaaataaatccaatactccataaacaccaaaacaaaataaaataccgtagaagtatagaacaatagcatatacaaagtagactgaaattttaacacctga 5120515  T
Q  213 agattagaaactcgaattttagcac 237  Q
    | | ||||||||  |||||||||||    
T  5120516 aaaatagaaactgaaattttagcac 5120540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 13490590 - 13490482
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||| ||||||   ||| ||||||||||||||||| || ||||||||||| |||| |||||||| | ||||  ||||| ||||    
T  13490590 agacaacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatgtcgtagaagtatagaaaaatagcacatgcgaagtagactgaaat 13490491  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  13490490 tttagcacc 13490482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 448
Target Start/End: Original strand, 23318189 - 23318277
Alignment:
Q  360 aagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagactgttgttaaaa 448  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||| ||| |||||||| ||||   |||||||||||    
T  23318189 aagtacatcattcctctttttatatactataagtatctttaacaagttcattatgattatacaaaatcaatgttatgttgttgttaaaa 23318277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 43170930 - 43171034
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||||||||||    |||||||||||||||||||| |||||||||||| |  |||||||||||| | ||||  |||||  ||||||||    
T  43170930 acatctgaaaataaatcaaatactctttagacaccaaaacaaaataaaatatcgtagaagcatggaacaatagcacatgcgaagtagactgtaattttag 43171029  T
Q  206 cacct 210  Q
    |||||    
T  43171030 cacct 43171034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 16686645 - 16686720
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  16686645 acatctgaaaataaatcagatacttcatagacaccaaaacaaaataaaataccgtataagtatagaacaatagcac 16686720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 29150792 - 29150689
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||| ||||||||||||||||  |||||| ||||||||||||||| ||| |||| ||||||||| ||||| ||| | ||||  ||||| |||||||||    
T  29150792 acatctaaaaataaatcaaatacttcatagataccaaaacaaaataaaataccgtaaaagtagagagcaataacacttgcgaagtagactgaaattttag 29150693  T
Q  206 cacc 209  Q
    ||||    
T  29150692 cacc 29150689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 14651604 - 14651666
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  14651604 aagatacaataactcatttgtatactacaaataaatcattcctctttttatatgctacaagta 14651666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 29789992 - 29789919
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagc 179  Q
    ||||||||||||||||||||||    ||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  29789992 acatctgaaaataaatcaaatattctatagataccaaaacaaaataaaatatcgtagaagtatagaacaatagc 29789919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 39537308 - 39537411
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| |||||    ||| ||||||||||||||||| ||||| ||||||||||||| |||||||| | ||||  | ||| |||||||||    
T  39537308 acatctgaaaataaattaaatattctatatacaccaaaacaaaataaaatatcttagaagtagagaaaaatagcacatgcgaagtaaactgaaattttag 39537407  T
Q  206 cacc 209  Q
    ||||    
T  39537408 cacc 39537411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 263 - 330
Target Start/End: Original strand, 43171059 - 43171126
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactc 330  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||  ||||||||||||||||||||||    
T  43171059 aaagtatatcaacacgtaattaactaaattttaaacttttggatgcaaaattctccaatgttaaactc 43171126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 420
Target Start/End: Original strand, 43171184 - 43171267
Alignment:
Q  335 atacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||||||||||| |||||| |||| ||||||||||||||| |||||||||| || | |||||||||  |||||||||| |||||||    
T  43171184 atacaagaactcctttgtacactagaagtacatcattcctttttttatatgttataggtatctcta--aagttcattatgatgata 43171267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 5578512 - 5578620
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||| ||||||   ||  ||||||||||||||||| |||||||| |||||||||| |||||||  | | ||  ||||| ||||    
T  5578512 agacaacatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgtaaaagtagagaaaaatagcatatgcaaagtagactgaaat 5578611  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  5578612 tttagcacc 5578620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 5120567 - 5120629
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgtta 325  Q
    |||||||||||| || |||||||||| |||||||| ||||||||  |||||||||||||||||    
T  5120567 aaagtatatcaatacgtaattaattaaattttaaacttttggatgaaaaattctccaatgtta 5120629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 7850667 - 7850602
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  7850667 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 7850602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 14651482 - 14651547
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| ||||||||||||| ||||||    
T  14651482 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaattttaaac 14651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 23963051 - 23962942
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  23963051 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 23962952  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  23962951 ttttagcacc 23962942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 38491399 - 38491334
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  38491399 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 38491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 26402439 - 26402367
Alignment:
Q  136 acaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcac 208  Q
    ||||||||||||||||| ||| ||||||||||| |||||||| ||||| |  || ||||| ||||||||||||    
T  26402439 acaccaaaacaaaataaaataccgtagaagtagcgaacaataacacctgcataatagactgaaattttagcac 26402367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 13825862 - 13825966
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||| |||||||||||||||| |||  ||||| ||||||||| || ||| |||| ||||||||||||||| ||| | | ||  ||||| ||||    
T  13825862 agacaacatctaaaaataaatcaaatactaca--gacacaaaaacaaaacaaaataccgtaaaagtagagaacaataacacatgcaaagtagactgaaat 13825959  T
Q  201 tttagca 207  Q
    |||||||    
T  13825960 tttagca 13825966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 516
Target Start/End: Original strand, 33922293 - 33922348
Alignment:
Q  461 tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    ||||||||||||||| | |||| |||||||||||| |||||||||| |||||||||    
T  33922293 tttagcacacttaatcacttatgtcaataattttatcacacttatgataagaaatt 33922348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 8805935 - 8806004
Alignment:
Q  113 aaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacct 183  Q
    ||||||||| ||||||  |||| | ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  8805935 aaaataaattaaatacttcata-ataccaaaacaaaataaaataccgtagaagtagataacaatagcacct 8806004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 20891041 - 20891139
Alignment:
Q  111 tgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacc 209  Q
    ||||||||||||||||||   | | ||||||||||||||||| |||| ||||||||| |||| | || ||| | ||||  ||||| |||||||||||||    
T  20891041 tgaaaataaatcaaatactctacacacaccaaaacaaaataaaatattgtagaagtaaagaatattatcacatgcgaagtagactgaaattttagcacc 20891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 2677165 - 2677056
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| |||||||| |||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  2677165 agacaacatctgaaaataaattaaatattttatacacaccaaaccaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 2677066  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  2677065 ttttagcacc 2677056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 13382503 - 13382584
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| ||||||||    
T  13382503 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcac 13382584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 16039915 - 16039983
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaa 175  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||| | | |||||||| |||||||||    
T  16039915 acatctaaaaataaatcaaatactctatagacaccaaaacaaaataa-aaaccgtagaagcagagaacaa 16039983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 18889269 - 18889160
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||| | | | ||||  ||||| |||    
T  18889269 agacaacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaataactcatgcgaagtagactgaaa 18889170  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  18889169 ttttagcacc 18889160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 26402296 - 26402247
Alignment:
Q  282 ttaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  26402296 ttaattaaattttaaacttttggatggaaaattctccaattttaaactca 26402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 26402192 - 26402140
Alignment:
Q  336 tacaagaactcatttgtatactaaaagtacatcattcctctttttatatgcta 388  Q
    ||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||||    
T  26402192 tacaagaactcctttgtattctagaagtatatcattcttctttttatatgcta 26402140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 7850543 - 7850480
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  7850543 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 7850480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 37135183 - 37135131
Alignment:
Q  462 ttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    ||||||||||||||||   ||||||||||||||| |||||||||| |||||||||    
T  37135183 ttagcacacttaataac--atatcaataattttatcacacttatgataagaaatt 37135131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 42879785 - 42879715
Alignment:
Q  111 tgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    ||||||||||| ||||||   ||| ||||||||||||||||| ||| | |||| |||||||| ||||||||    
T  42879785 tgaaaataaattaaatactctatatacaccaaaacaaaataaaataccatagatgtagagaaaaatagcac 42879715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 23318297 - 23318353
Alignment:
Q  460 atttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    ||||| |||||||||||| |||||||||||||| || || |||||||  ||||||||    
T  23318297 atttatcacacttaataacttatatcaataattgtatcatacttatgagaagaaatt 23318353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 38491549 - 38491453
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  38491549 aaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttcttcgaagtagactgaaattttagcacct 38491453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 342 - 515
Target Start/End: Original strand, 39038433 - 39038614
Alignment:
Q  342 aactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagactgtt 441  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||| |||||||| ||| || ||||    
T  39038433 aactcctttgtatgctagaagtacatcattcctctttttatatgttataagtatctctaacaagtttattatgatgatacaaaatcaatgttggattgtt 39038532  T
Q  442 gttaaaaacgtatctt---tga-----tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaat 515  Q
    |||||||  ||| |||   |||     ||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||    
T  39038533 gttaaaagtgtaccttcaatgatgaattttagcacacttaataatttatatcaataattttatcacccttatgataaaaaat 39038614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 335 - 516
Target Start/End: Original strand, 43178761 - 43178950
Alignment:
Q  335 atacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgtta 434  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||||||||||| || ||||||||||| ||| ||||||| ||||||| |||||||| ||||    
T  43178761 atacaagaactcctttgtatgctagaagtacatcatttctctttttatatgatataagtatctctaccaaattcattatgatgatacaaaatcaatgtta 43178860  T
Q  435 gactgttgttaaaaacgtatctttga--------tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    |||| ||||||||   ||| |||  |        |||| |||||||||||| ||||||||||| ||||| |||||||||| |||||||||    
T  43178861 gactattgttaaatgtgtaccttcaatggttaattttaacacacttaataacttatatcaatacttttatcacacttatgataagaaatt 43178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 21864054 - 21863950
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||| ||||||||| ||||||  |||| ||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||  ||| | |||||||||    
T  21864054 acatctcaaaataaattaaatactccataaacaacaaaacaaaataaaataccgtagaagtagagaacaatagcacctgcgaagtagagtgaaattttag 21863955  T
Q  206 cacct 210  Q
    |||||    
T  21863954 cacct 21863950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 35477886 - 35477989
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| |||||| | ||| ||||||||||||||| | |||||||| |||||||||| |||||||| | ||||  ||||| |||||||||    
T  35477886 acatctgaaaataaattaaatactatatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatccgaagtagactgaaattttag 35477985  T
Q  206 cacc 209  Q
    ||||    
T  35477986 cacc 35477989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 444
Target Start/End: Complemental strand, 23305548 - 23305442
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacg 431  Q
    ||||||| ||||||||||||||| ||| ||||| || ||||||||||| ||||||||||||      || |||||||||||||||| || |||||||| |    
T  23305548 aagatacgagaactcatttgtatgctagaagtagattattcctcttttaatatgctacaag------taccaagttcattacgatgttacaaaatcaatg 23305455  T
Q  432 ttagactgttgtt 444  Q
    |||||||||||||    
T  23305454 ttagactgttgtt 23305442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 43178641 - 43178708
Alignment:
Q  264 aagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  43178641 aagtatatcaacacgtaattaattaaattttaaacttttggataaaaaaatctccaatgttaaactca 43178708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 20394689 - 20394795
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||| ||||||   ||  ||||||||||||||||| ||||||||||||||||||| |||||||| | ||||  | ||| ||||    
T  20394689 agacaacatctgaaaataaattaaatactttatgtacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcacatgcgaagtatactgaaat 20394788  T
Q  201 tttagca 207  Q
    |||||||    
T  20394789 tttagca 20394795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 8113542 - 8113610
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||||||||||| |||||||| || |||||||| ||||||||  |||||||||||||||||||||||    
T  8113542 aaagtatatcaacatataattaactaaattttaaacttttggatgcaaaattctccaatgttaaactca 8113610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 9420874 - 9420771
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| ||||||    | |||||||| ||| ||||| |||||||||||||||||||||||||||| |   ||| ||||| |||||||||    
T  9420874 acatctgaaaataaattaaatactctgttgacaccaacacataataaaatatcgtagaagtagagaacaatagcacgtggaaaatagactgaaattttag 9420775  T
Q  206 cacc 209  Q
    ||||    
T  9420774 cacc 9420771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13754310 - 13754207
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||| ||||||||| ||||||   ||| ||||||||||||||| | |||||||| |||||||||| |||||||| | ||||  ||||| |||||||||    
T  13754310 acatctaaaaataaattaaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaagtagactgaaattttag 13754211  T
Q  206 cacc 209  Q
    ||||    
T  13754210 cacc 13754207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 18667562 - 18667460
Alignment:
Q  107 catctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagc 206  Q
    ||||||||||||||| ||||||   ||| ||| ||||||||||| | |||||||| |||||||||| |||||||| | ||||  ||||| ||||||||||    
T  18667562 catctgaaaataaattaaatactctatatacatcaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaagtagactgaaattttagc 18667463  T
Q  207 acc 209  Q
    |||    
T  18667462 acc 18667460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 4540062 - 4539953
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| | ||||  ||||| |||    
T  4540062 agacaacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgcgaagtagactgaaa 4539963  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  4539962 ttttagcacc 4539953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 6195661 - 6195726
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||| |||||||||||||| |||||    
T  6195661 aaagtatatcaacacgtaattaattaaattttaaacatttggatacaaaattctccaatgctaaac 6195726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 8113414 - 8113517
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| || |||   ||||||||||||||||||||| |||| ||||||||| ||||||||| ||| | ||||  | ||| |||||||||    
T  8113414 acatctgaaaataaattaa-tactctatagacaccaaaacaaaataaaatattgtagaagtatagaacaataacacatgcgaagtacactgaaattttag 8113512  T
Q  206 cacct 210  Q
    |||||    
T  8113513 cacct 8113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 24441565 - 24441645
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||| ||||||||||||||||||  |||||| ||||||| | ||||| ||||| |||||||| |||||||||||||    
T  24441565 agacaacatttgaaaataaatcaaatacttcatagaaaccaaaatagaataaaatatcatagaagtatagaacaatagcac 24441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 39038156 - 39038258
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| |||||||| |||||||||  || ||||| ||||||||||||| ||| |||||   |||||||||||||||| ||||||   |||| |||||||||    
T  39038156 acatatgaaaatacatcaaatacttcacagacatcaaaacaaaataaaataccgtag---tagagaacaatagcacttacgaagttgactgaaattttag 39038252  T
Q  206 cacctg 211  Q
    ||||||    
T  39038253 cacctg 39038258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 19311807 - 19311869
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| |||||||||||| |||| || || |||||||||||| ||||||||||||||||    
T  19311807 aagatacaataactcatttgtagactacaaataaatcattcctcttcttatatgctacaagta 19311869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 6189145 - 6189210
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  6189145 aaagtatatcaacacgtaattaattaaattttatacatttggatacaaaattctccaatgctaaac 6189210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 8069935 - 8069870
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  8069935 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 8069870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 19311684 - 19311749
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  ||| |||| ||||||||||||||||||||    
T  19311684 aaagtatatcaacacgtaattaattaaattttagacattttgatacaaaattctccaatgttaaac 19311749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 48637055 - 48636990
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  48637055 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 48636990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 48238961 - 48238865
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || ||||| ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  48238961 aaataaatcaaatactccatagaaaccaaaactaaacaaaatatcataggattagagaacaatagcttctccgaagtagactgaaattttagcacct 48238865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 24441699 - 24441770
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatg-ttaaactcaaa 333  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||  |||||||| ||||| |||||||||||    
T  24441699 aaagtatatcaacacgtaattaaataaattttaaacttttggatgcaaaattcttcaatgtttaaactcaaa 24441770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 43178516 - 43178615
Alignment:
Q  111 tgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    ||||||||||| ||||||  |||| ||| ||  ||||||||| ||||||||| |||| |||||||||||||||| |||  | |||| ||||||| |||||    
T  43178516 tgaaaataaattaaatacttcataaacatcaggacaaaataaaatatcgtaggagtaaagaacaatagcacctatgaagtaaactacaattttaacacct 43178615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 48238811 - 48238748
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaa 326  Q
    ||||||||||||||| |||||||||| |||||| |  |||| ||| ||||||||||||||||||    
T  48238811 aaagtatatcaacacgtaattaattaaattttagacatttgaatacaaaattctccaatgttaa 48238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 3123684 - 3123750
Alignment:
Q  115 aataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    ||||| ||||||||   ||||||||||||||||||||| ||| ||||||| |||| |||||||||||    
T  3123684 aataattcaaatactctatagacaccaaaacaaaataaaataccgtagaaatagataacaatagcac 3123750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 8113692 - 8113778
Alignment:
Q  334 gatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||||||||  || |||||||| || ||||||||||||| |  ||||||||| || |  |||||||||||||||||||| |||||||    
T  8113692 gatacaagagttcctttgtatagtagaagtacatcattcttacttttatatgttatagatatctctaacaagttcattatgatgata 8113778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 8389202 - 8389311
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||| ||| |  |||  ||||| |||    
T  8389202 agacaacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaataacacatgtgaagtagactgaaa 8389301  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  8389302 ttttagcacc 8389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 14574280 - 14574175
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||| ||||||||||||||||   ||||| | |||||||||| || | |||| ||||| | |||||||||| || | ||||  ||||| |||||||||    
T  14574280 acatcttaaaataaatcaaatactcaatagaaatcaaaacaaaacaaaaaatcgcagaagcatagaacaatagaacatgcgaagtagactgaaattttag 14574181  T
Q  206 cacctg 211  Q
    ||||||    
T  14574180 cacctg 14574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 8070085 - 8069989
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| |||||| ||| | ||| | ||||||||||||||  || ||||  | ||| ||||||||||||||    
T  8070085 aaataaatcaaatactccatagaaaccaaaactaaataaaataccataggattagagaacaatagcttctccgaagtaaactgaaattttagcacct 8069989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 14554669 - 14554617
Alignment:
Q  465 gcacacttaataatttatatcaataattttaccacacttatggtaagaaattg 517  Q
    ||||||||||| | ||||||||||||||||| |||| ||||| ||||||||||    
T  14554669 gcacacttaatcacttatatcaataattttatcacatttatgataagaaattg 14554617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 6189269 - 6189332
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  6189269 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 6189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 48238688 - 48238625
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  48238688 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 48238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 48636931 - 48636868
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  48636931 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 48636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 31072432 - 31072537
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaatttta 204  Q
    |||||||||||||||| |||||    ||| ||||| ||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| ||||||||    
T  31072432 acatctgaaaataaattaaatattctatatacaccgaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaatttta 31072531  T
Q  205 gcacct 210  Q
     |||||    
T  31072532 acacct 31072537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 39038308 - 39038369
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||||  || |||||||||||||||    
T  39038308 tatatcaacacgtaattaattaaattttaaacttttggatggaaa--tc-ccaatgttaaactca 39038369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 7e-35; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 349 - 448
Target Start/End: Original strand, 12783780 - 12783879
Alignment:
Q  349 ttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagactgttgttaaaa 448  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  12783780 ttgtatcctagaagtacatcattcctctttttatatgctataagtatctctaacaagttcattatgatgatacaaaatcaatgttagactgttgttaaaa 12783879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 44310848 - 44310768
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||||||||||   ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44310848 agacaacatctgaaaataaatcaaatactctatacacaccaaaacaaaataaaatatcgtagaagtagagaacaatagcac 44310768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 448
Target Start/End: Original strand, 47397293 - 47397401
Alignment:
Q  335 atacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgtta 434  Q
    |||||| ||||| ||| ||| ||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||     |||||| |||||||| ||||    
T  47397293 atacaataactcctttatatgctagaaggacatcattcctctctttatatgctataagtatctctaacaagttca-----atgatacaaaatcaatgtta 47397387  T
Q  435 gactgttgttaaaa 448  Q
    ||| ||||||||||    
T  47397388 gacggttgttaaaa 47397401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 42055724 - 42055795
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42055724 acatatgaaaataaatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 42055795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 9023619 - 9023548
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    ||||||||| |||||| ||||||   ||||||||||||||||||||| |||||||| |||||||||||||||    
T  9023619 acatctgaatataaattaaatactctatagacaccaaaacaaaataaaatatcgtaaaagtagagaacaata 9023548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 47397163 - 47397221
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaat 321  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||    
T  47397163 aaagtatatcaacatataattaattaaattttaaatttttggatggtaaattctccaat 47397221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 21906580 - 21906471
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaat-aagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| ||||| |  ||| ||||||||||||||| || ||| ||||||||||||||| |||||||| |  |||  ||||| |||    
T  21906580 agacaacatctgaaaataaattaaatatcctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 21906481  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  21906480 ttttagcacc 21906471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 12028196 - 12028128
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||||||||| || ||||||| || |||||||| ||||||||  |||||||||||||||||||||||    
T  12028196 aaagtatatcaaaacgtaattaactaaattttaaacttttggatgcaaaattctccaatgttaaactca 12028128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 12028325 - 12028221
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    ||||||||||| ||||||||||   ||||||||| |||||||||||| ||||| |||||||| ||||||| | ||| |  |||  ||||| |||||||||    
T  12028325 acatctgaaaacaaatcaaatatttcatagacacaaaaacaaaataaaatatcctagaagtatagaacaacaacacatgtgaagtagactgaaattttag 12028226  T
Q  206 cacct 210  Q
    |||||    
T  12028225 cacct 12028221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 48646495 - 48646424
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    ||||||||||||||||||||||    ||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  48646495 acatctgaaaataaatcaaataatctatatacaccaacacaaaataaaatatcgtagaagtatagaacaata 48646424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 5208352 - 5208422
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaat 176  Q
    |||||| ||| ||||||||||||  |||| ||||||||| ||||||| |||||||||||||| ||||||||    
T  5208352 acatctaaaagtaaatcaaatactccataaacaccaaaataaaataaaatatcgtagaagtatagaacaat 5208422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 22070704 - 22070595
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| | ||||  ||||| |||    
T  22070704 agacaacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgcgaagtagactgaaa 22070605  T
Q  200 ttttagcacc 209  Q
    || |||||||    
T  22070604 ttctagcacc 22070595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 28945553 - 28945618
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  28945553 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 28945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 34307349 - 34307430
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | |||||||||||||||||| ||||||||    
T  34307349 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaatatcgtagaagtagagaaaaatagcac 34307430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 36297055 - 36296990
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  36297055 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 36296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 42722590 - 42722525
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  42722590 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 42722525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 12783460 - 12783573
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtaga----gaacaatagcacctacgaaacagacta 196  Q
    |||| |||||| ||||||||||||||||  |||| |||||||||||| |||| |||| |||||||||||    ||||| |||||| | | ||  |||||     
T  12783460 agacaacatcttaaaataaatcaaatacttcataaacaccaaaacaatataaaatattgtagaagtagatcgagaacactagcacttgctaagtagactg 12783559  T
Q  197 aaattttagcacct 210  Q
    ||||||||||||||    
T  12783560 aaattttagcacct 12783573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23664011 - 23664079
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtaga 169  Q
    |||| |||||||||||||||| ||||||   ||  ||||||||||||||||| ||||||||||||||||    
T  23664011 agacaacatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgtagaagtaga 23664079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 26222039 - 26221975
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| |||||||||||||||||||||||    
T  26222039 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatgttaaactca 26221975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 48596255 - 48596363
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  48596255 agacaacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 48596354  T
Q  200 ttttagcac 208  Q
    |||||||||    
T  48596355 ttttagcac 48596363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 49228383 - 49228451
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||| |||||  |||||||||||||||||| |||||  |  |||||||||||||||||||||||    
T  49228383 aaagtatataaacacgcaattaattacattttaaacttttgattgaaaaattctccaatgttaaactca 49228451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 17967227 - 17967336
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||| ||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  17967227 agacaacatctgaaaataaattaaatattctatatacatcaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 17967326  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  17967327 ttttagcacc 17967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 26465278 - 26465169
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | ||  |||||||||||||| |||||||| |  |||  ||||| |||    
T  26465278 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaatactgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 26465179  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  26465178 ttttagcacc 26465169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 5208553 - 5208605
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatg 385  Q
    ||||||||||||||||| |||||||| |||| ||||||||  |||||||||||    
T  5208553 agatacaagaactcattcgtatactagaagtgcatcattctgctttttatatg 5208605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 48646362 - 48646294
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||||||||||||  ||||||||| ||||||||  ||| |||  |||||||| ||||||||||||||    
T  48646362 aaagtatatcaacacgcaattaattaaattttaaacatttagatgcaaaattcttcaatgttaaactca 48646294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 36296931 - 36296868
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  36296931 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 36296868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 42722466 - 42722403
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  42722466 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 42722403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 26222198 - 26222104
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcac 208  Q
    |||||||||||||||  |||||| |||||||| ||| || ||| | ||| | ||||||||||| ||  || ||||| | ||||||||||||||||    
T  26222198 aaataaatcaaatactccatagaaaccaaaactaaacaacataccataggattagagaacaattgcttctgcgaaataaactaaaattttagcac 26222104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 5049656 - 5049547
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||| ||||||||| |||||    ||| ||||||||| ||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  5049656 agacaacatctaaaaataaattaaatattctatatacaccaaaataaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 5049557  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  5049556 ttttagcacc 5049547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 13957565 - 13957478
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  13957565 agatacaagaagtcatttgtatactagaagtacatcattcctctttttatatgctataagtatctctaacaagttcattatgatgata 13957478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 42511503 - 42511578
Alignment:
Q  337 acaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcatta 412  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  42511503 acaagaactcttttgtatactagaagtacatcattcctctttttatatgttagaagtatctctaacaagttcatta 42511578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 10142712 - 10142607
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||| || ||||||||||| ||||||||||||| |  |||  ||||| |||||||||    
T  10142712 acatttgaaaataaatcaaatactgcatagacaccaaaacaaaataaaatgtcgtagaagtatagaacaatagcacatgtgaagtagactgaaattttag 10142613  T
Q  206 cacctg 211  Q
    ||||||    
T  10142612 cacctg 10142607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 494
Target Start/End: Complemental strand, 25201621 - 25201460
Alignment:
Q  338 caagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagac 437  Q
    ||||||||| |||||||   | ||||||||||||||||| ||||||| | | |||||| |||||||||| ||||| ||||||| ||||||||  ||||||    
T  25201621 caagaactcctttgtatgtaagaagtacatcattcctctctttatataccataagtatttctaacaagtccattatgatgataaaaaatcaatattagac 25201522  T
Q  438 tgttgttaaaaacgta---tctttga--tttagcacacttaataatttatatcaataatttt 494  Q
    |||||||||||  |||   ||| |||  |||||||||||| |||| ||||||||||||||||    
T  25201521 tgttgttaaaagtgtactttctatgaattttagcacacttgataacttatatcaataatttt 25201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 51758793 - 51758687
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacg 431  Q
    ||||||||||||||| ||||| | ||  |||||||||||||| ||||||||||| || |||||||| ||||||||| |||||||||||| ||||| || |    
T  51758793 aagatacaagaactcctttgtttgcttgaagtacatcattccgctttttatatgatataagtatctttaacaagtttattacgatgatacaaaattaatg 51758694  T
Q  432 ttagact 438  Q
    |||||||    
T  51758693 ttagact 51758687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 3665052 - 3665128
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  3665052 agacaacatctgaaaataaatcaaatactatatagacaccaaaacaaaataaaataccatagaagtagagaacaata 3665128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 52460742 - 52460633
Alignment:
Q  101 agactacatctgaaaa-taaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| ||||||||||| ||||||||||||    |||||||| ||||||||||| ||| |||||||||||||||||||| ||| | ||||  ||||| |||    
T  52460742 agacaacatctgaaaaataaatcaaatacattgtagacaccgaaacaaaataaaataccgtagaagtagagaacaataacacatgcgaagtagactgaaa 52460643  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  52460642 ttttagcacc 52460633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 31915668 - 31915588
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||||||||||   ||| ||||||||||||||||| ||| | |||||||||| |||||||||||    
T  31915668 agacaacatctgaaaataaatcaaatacactataaacaccaaaacaaaataaaataccatagaagtagacaacaatagcac 31915588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 25201861 - 25201790
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    |||||| ||||||||||||||||  |||||||||||| |||| |||| ||| ||||||||||||||||||||    
T  25201861 acatctaaaaataaatcaaatactccatagacaccaacacaagataaaataccgtagaagtagagaacaata 25201790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 13957688 - 13957620
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||  |||||||| ||||||||||||||    
T  13957688 aaagtatatcaacacgtaattaactaaattttaaacttttggatgcaaaattcttcaatgttaaactca 13957620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 10142583 - 10142517
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaact 329  Q
    ||||||||||||||| ||||||| || |||||||| ||||| ||  |||||||||||||||||||||    
T  10142583 aaagtatatcaacacgtaattaactaaattttaaacttttgaatgcaaaattctccaatgttaaact 10142517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 51759046 - 51758941
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||||||||||  | ||||||     ||||||||| |||| ||||||||  ||||||||||||| | ||||  ||| ||||||    
T  51759046 agacaacatctgaaaataaatcaaatactccttagaca-----acaaaataaaatattgtagaagtccagaacaatagcacatgcgaagtagattaaaat 51758952  T
Q  201 tttagcacctg 211  Q
    |||||||||||    
T  51758951 tttagcacctg 51758941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 10094925 - 10095034
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  10094925 agacaacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 10095024  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  10095025 ttttagcacc 10095034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 13957815 - 13957713
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||||||||||   | ||||  ||||||||||||| |||||||||||||| ||||||||||||| | | ||  ||||| |||||| ||    
T  13957815 acatatgaaaataaatcaaatactctaaagac--caaaacaaaataaaatatcgtagaagtatagaacaatagcacgtgcaaagtagactgaaatttgag 13957718  T
Q  206 cacct 210  Q
    |||||    
T  13957717 cacct 13957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 21320395 - 21320327
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaa 175  Q
    |||||||||||||||||||||||  |||| ||||||||| ||||||| |||||  |||||||||||||||    
T  21320395 acatctgaaaataaatcaaatacttcata-acaccaaaataaaataaaatatcaaagaagtagagaacaa 21320327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 51338004 - 51337939
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  51338004 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 51337939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 14192062 - 14192126
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| |||||||||||||||||||||||    
T  14192062 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatgttaaactca 14192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 36213927 - 36213852
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||||||||||||||| ||||||   ||| ||||||||||||||||| ||| |||||| | |||||| ||||||||    
T  36213927 acatctgaaaataaattaaatactctataaacaccaaaacaaaataaaataccgtagatgcagagaaaaatagcac 36213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 9921605 - 9921663
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaa 164  Q
    |||||||||||||||||||||||   ||||||||||||| ||||||| |||| ||||||    
T  9921605 acatctgaaaataaatcaaatacttgatagacaccaaaataaaataaaatattgtagaa 9921663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 20152094 - 20152180
Alignment:
Q  360 aagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgttagactgttgttaa 446  Q
    ||||| ||||||| |||||||||||| |||||||||||||| |||||| |||  ||| |||||| || |  |||||| |||||||||    
T  20152094 aagtatatcattcatctttttatatgttacaagtatctctatcaagtttattttgattatataatatgagtgttagaatgttgttaa 20152180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 7413647 - 7413756
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||| ||||||| |||||||| |  |||  ||||| |||    
T  7413647 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaaatagagaaaaatagcacatgtgaagtagactgaaa 7413746  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  7413747 ttttagcacc 7413756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 7459728 - 7459837
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||| ||||||| |||||||| |  |||  ||||| |||    
T  7459728 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaaatagagaaaaatagcacatgtgaagtagactgaaa 7459827  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  7459828 ttttagcacc 7459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 28143189 - 28143254
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||| ||||| |||||| |  |||||||| |||||||||||||| |||||    
T  28143189 aaagtatatcaacacgtaatcaattaaattttagacatttggatacaaaattctccaatgctaaac 28143254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 28803797 - 28803906
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || |||||||||||| || |||||||  | ||||  ||||| |||    
T  28803797 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaagtagactgaaa 28803896  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  28803897 ttttagcacc 28803906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 10142460 - 10142389
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcatt 411  Q
    ||||||| |||||| ||||||||||| | |||||| ||||||||||||||       ||||||||||||||||||||||    
T  10142460 agatacatgaactcctttgtatactagatgtacatgattcctctttttat-------aagtatctctaacaagttcatt 10142389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 25201749 - 25201681
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||| |||| ||| ||| |||||| |||||||| |||| |||| |||||||| ||||||||||||||    
T  25201749 aaagtacatcatcacgtaagtaattaaattttaaacttttagatacaaaattcttcaatgttaaactca 25201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 39480160 - 39480235
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||||||||||||||| ||||||   ||| |||| |||||||||||| |||  ||||| |||||||| ||||||||    
T  39480160 acatctgaaaataaattaaatactctatatacacaaaaacaaaataaaatactgtagatgtagagaaaaatagcac 39480235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 51337880 - 51337817
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  51337880 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 51337817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 24611000 - 24611065
Alignment:
Q  108 atctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaaca 174  Q
    ||||||||||||||||||||    ||| | ||||||||||||||| ||| |||||||||||||||||    
T  24611000 atctgaaaataaatcaaatattctataaa-accaaaacaaaataaaataccgtagaagtagagaaca 24611065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 42511284 - 42511354
Alignment:
Q  140 caaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    ||||||| ||||| |||||||||||||| |||||||||||||   | ||  ||||| ||||||||||||||    
T  42511284 caaaacataataaaatatcgtagaagtatagaacaatagcacacgcaaagtagactgaaattttagcacct 42511354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 1842912 - 1842957
Alignment:
Q  107 catctgaaaataaatcaaataccacatagacaccaaaacaaaataa 152  Q
    ||||| ||||||||||||||||   |||||||||||||||||||||    
T  1842912 catctaaaaataaatcaaatactttatagacaccaaaacaaaataa 1842957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 20152206 - 20152258
Alignment:
Q  464 agcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    |||||||||| | | ||||||||||| ||||| |||||||||| |||||||||    
T  20152206 agcacacttactcacttatatcaatacttttatcacacttatgctaagaaatt 20152258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 42511379 - 42511446
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| ||| ||||||| || |||||||| | || ||| | ||||||||||||||||||||||    
T  42511379 aaagtatatcagcacgtaattaactaaattttaaactcttagat-gcaaattctccaatgttaaactca 42511446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 1017 - 1104
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  1017 agatacaagaactcttttgtatactagaagtacatcgttcctctttttatatgctataattatctctaacaagttcattatgatgata 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 517
Target Start/End: Original strand, 11648271 - 11648463
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgt 432  Q
    |||||||| ||||| ||||||| ||| || |||||||||||||||||||||  ||| |||||||||||||||||||||||  |||||| ||||| || ||    
T  11648271 agatacaataactcctttgtatgctagaaatacatcattcctctttttataaactataagtatctctaacaagttcattataatgatacaaaattaatgt 11648370  T
Q  433 tagactgttgttaaaaacgtatctt---tg----attt-agcacacttaataatttatatcaataattttaccacacttatggtaagaaattg 517  Q
    |||||| ||||||||   ||| |||   ||    |||| |||||||||||||| |||||| |||| ||||| |||||||||| ||||||||||    
T  11648371 tagactattgttaaatgtgtaacttcaatggtgtatttaagcacacttaataacttatattaatagttttatcacacttatgataagaaattg 11648463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 9381756 - 9381853
Alignment:
Q  113 aaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    ||||||||||||||||  ||||||||||||||||||||||  ||||||||||||| ||||||||||||| | ||||  ||||| ||||||||||||||    
T  9381756 aaaataaatcaaatactccatagacaccaaaacaaaataaagtatcgtagaagtatagaacaatagcacatgcgaagtagactgaaattttagcacct 9381853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 333 - 516
Target Start/End: Original strand, 960845 - 961034
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgt 432  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||| || ||  ||  ||||||||||||||| ||||||| ||||| || ||    
T  960845 agatacaagaactcatttgtatgctataagta--tcattcctctttttatatgttataaacatagctaacaagttcattatgatgatacaaaattaatgt 960942  T
Q  433 tagactgttgttaaaaacgtatctttga--------tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
    | || |||||||||||  ||  |||  |        ||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||    
T  960943 tggattgttgttaaaagtgtgccttcaatggtcaattttagcacacttaataacttatatcaataattttatcacacttatgagaagaaatt 961034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 7263541 - 7263644
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| |||||| | ||| ||||||||||||||| | |||||||| |||||||||| |||||||| | |||| |||||| |||||||||    
T  7263541 acatctgaaaataaattaaatactatatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatccgaagcagactgaaattttag 7263640  T
Q  206 cacc 209  Q
    ||||    
T  7263641 cacc 7263644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 602034 - 602118
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctac 185  Q
    |||| |||||||||||||||||||||||  |||||||| ||||||||||||| |||| || ||||||||||||||||||| ||||    
T  602034 agacgacatctgaaaataaatcaaatacttcatagacaacaaaacaaaataaaatattgttgaagtagagaacaatagcatctac 602118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 446
Target Start/End: Complemental strand, 24683209 - 24683101
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacg 431  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||       || |||||| |||| ||| ||| |||||||| |    
T  24683209 aagatacaagaactcatttgtatgctacaagtaaatcattcctctttttatatgctacaa------ataccaagtttattatgataatacaaaatcaatg 24683116  T
Q  432 ttagactgttgttaa 446  Q
    |||||||||||||||    
T  24683115 ttagactgttgttaa 24683101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 11648150 - 11648218
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    |||||||||||||||||||||||||| |||||||| ||||||||  ||||| |||||||||||||||||    
T  11648150 aaagtatatcaacacataattaattaaattttaaacttttggatgaaaaatactccaatgttaaactca 11648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 16729925 - 16729826
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| ||||||   ||  ||||||||||||||||| ||||||||||||||||||| |||||||| | ||||  ||||| |||||||||    
T  16729925 acatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcacatgcgaagtagactgaaattttag 16729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 602168 - 602236
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| |||||||||  |||||||||||||    
T  602168 aaagtatatcaacacgtaattaattaaattttaaacttttggatggaaaattctaaaatgttaaactca 602236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 9381977 - 9382062
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||||||||||||| |||||||| || ||||||||||||| | ||||||||||||||| |||   ||||||||||||||| |||||||    
T  9381977 agatacaagaactcttttgtatattagaagtacatcattcttatttttatatgctacaggta--gctaacaagttcattatgatgata 9382062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 23231913 - 23232009
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    ||||||||||||||   ||| |||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||  | ||| ||||||||| ||||    
T  23231913 aaataaatcaaatatttcattgacaccaaaataaaataaaataccgtagaagtagagaacaataacacctacgaagtatactgaaattttagtacct 23232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 11994579 - 11994641
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||||||||| || || |||||||||||| ||||||||||||||||    
T  11994579 aagatacaataactcatttgtatactacaaataaatcattcctcttcttatatgctacaagta 11994641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 28374283 - 28374329
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataa 152  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  28374283 acatctgaaaataaatcaaatacttcatagacaccaaaacaaaataa 28374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 1981797 - 1981688
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | |||||||||||||||||| |||||||  |  |||  ||||| |||    
T  1981797 agacaacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaaatatcgtagaagtagagaaaaatagcatatgtgaagtagactgaaa 1981698  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  1981697 ttttagcacc 1981688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 6927299 - 6927364
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  6927299 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 6927364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 11994456 - 11994521
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  ||| |||| ||||||||||||||||||||    
T  11994456 aaagtatatcaacacgtaattaattaaattttagacattttgatacaaaattctccaatgttaaac 11994521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 28509613 - 28509548
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  28509613 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 28509548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 28516820 - 28516755
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  28516820 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 28516755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 11648021 - 11648125
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    ||||||| |||| ||||||||||  ||||||||| |||||||||||| |||   || |||||| |||||||| ||| | ||||  ||||| |||||||||    
T  11648021 acatctgtaaatcaatcaaatacttcatagacacaaaaacaaaataaaatactataaaagtagtgaacaataacacatgcgaagtagactgaaattttag 11648120  T
Q  206 cacct 210  Q
    |||||    
T  11648121 cacct 11648125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 32073499 - 32073432
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaa 401  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||| ||||||||||||  ||||||||||||    
T  32073499 agatacaaaaactcatttgtatgctagaagtacatcatccct-tttttatatgctttaagtatctctaa 32073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 31597723 - 31597642
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| ||||||||    
T  31597723 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcac 31597642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 45117667 - 45117558
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || |||||||||||| || |||||||  | ||||  ||||| |||    
T  45117667 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaagtagactgaaa 45117568  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  45117567 ttttagcacc 45117558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 960725 - 960789
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| |||||||||| | |||||| |||| |||  ||||||||| |||||||||||||    
T  960725 tatatcaacacgtaattaattaaaatttaaactttttgatgcaaaattctctaatgttaaactca 960789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 2878954 - 2879018
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| ||||||||||||| |||||||||    
T  2878954 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatattaaactca 2879018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 7972890 - 7972965
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||||||||||||||| ||||||   ||| |||| |||||||||||| |||  ||||| |||||||| ||||||||    
T  7972890 acatctgaaaataaattaaatactcaatatacacaaaaacaaaataaaatactgtagatgtagagaaaaatagcac 7972965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 35824317 - 35824271
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaa 147  Q
    |||| |||||||||||||||||||||||  |||||||||| ||||||    
T  35824317 agacaacatctgaaaataaatcaaatactccatagacacctaaacaa 35824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 24190099 - 24190140
Alignment:
Q  107 catctgaaaataaatcaaataccacatagacaccaaaacaaa 148  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  24190099 catctgaaaataaatcaaatactttatagacaccaaaacaaa 24190140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 6927149 - 6927245
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  6927149 aaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttctccgaagtagactgaaattttagcacct 6927245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 28516970 - 28516874
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  28516970 aaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttctccgaagtagactgaaattttagcacct 28516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 44880014 - 44879910
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    ||||||||| |||||||||||||  | |||||||||||||||||||| |||| ||||||||| ||||||||| ||| | ||||  |||||||||||||||    
T  44880014 acatctgaatataaatcaaatacttcttagacaccaaaacaaaataaaatattgtagaagtatagaacaataacacatgcgaagtagactaaaattttag 44879915  T
Q  206 cacct 210  Q
    |||||    
T  44879914 cacct 44879910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 47185293 - 47185206
Alignment:
Q  333 agatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    |||||||||||||| |||||| | || |||||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||    
T  47185293 agatacaagaactcttttgtacattataagtacatcatttctctttttatatgctataagtatctctaacaagttcattgtgatgata 47185206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 3917607 - 3917715
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||| ||||||||||||||||||   || |||||||||||||||||| ||| || | |||| |||||||||||||||||||||  ||||  ||||    
T  3917607 agacaacatttgaaaataaatcaaatactctattgacaccaaaacaaaataaaataccgcaaaagttgagaacaatagcacctacgaagtagaccgaaat 3917706  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  3917707 tttagcacc 3917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 52448338 - 52448235
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| ||||||   ||| ||||||||||||||| | |||||||| |||||||||| |||||||| | ||||  ||||| |||||||||    
T  52448338 acatctgaaaataaattaaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaagtagactgaaattttag 52448239  T
Q  206 cacc 209  Q
    ||||    
T  52448238 cacc 52448235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 33100339 - 33100439
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||| ||  | ||||| |||||||||||| ||| | ||||  ||||| |||||||||    
T  33100339 acatttgaaaataaatcaaatactctatagacaccaaaacaaaataaaatgccttagaaatagagaacaataacacatgcgaagtagactgaaattttag 33100438  T
Q  206 c 206  Q
    |    
T  33100439 c 33100439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 47185545 - 47185471
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagca 180  Q
    |||||| ||||||||||||||||   ||||||| |||||||| |||| ||||||||||| || ||||||||||||    
T  47185545 acatctaaaaataaatcaaatactctatagacatcaaaacaacataaaatatcgtagaaatatagaacaatagca 47185471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 19157294 - 19157185
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  19157294 agacaacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 19157195  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  19157194 ttttagcacc 19157185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 23044638 - 23044703
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  23044638 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 23044703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 31884698 - 31884763
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  31884698 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 31884763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 6024502 - 6024566
Alignment:
Q  267 tatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||| | |||||||| |||||| |  |||||||| |||||||||||||||||||||||    
T  6024502 tatatcaacacgtcattaattaaattttagacatttggatacaaaattctccaatgttaaactca 6024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 47185416 - 47185348
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactca 331  Q
    ||||||||||||||  ||||||| || ||||||||  |||||||  |||||||||||||||||||||||    
T  47185416 aaagtatatcaacaagtaattaactaaattttaaacatttggatgcaaaattctccaatgttaaactca 47185348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 10994052 - 10994161
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || |||||||||||| || |||||||  | ||||  ||||| |||    
T  10994052 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaagtagactgaaa 10994151  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  10994152 ttttagcacc 10994161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 25071844 - 25071763
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| ||||||||    
T  25071844 agacaacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcac 25071763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 27941419 - 27941528
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| ||||||||| |||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  27941419 agacaacatctgaatataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 27941518  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  27941519 ttttagcacc 27941528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 53076871 - 53076980
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || || |||||||||||| |||||||| |  |||  ||||| |||    
T  53076871 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgaagaagtagagaaaaatagcacatgtgaagtagactgaaa 53076970  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  53076971 ttttagcacc 53076980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 23044762 - 23044825
Alignment:
Q  332 aagatacaagaactcatttgt-atactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||| |||||| || || ||||||| ||||||||||||||| |||||    
T  23044762 aagatacaataactcatttgttatactacaaataaatcattcatctttttatatgctataagta 23044825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 29714151 - 29714097
Alignment:
Q  111 tgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaag 165  Q
    ||||||||||||||||||   ||||||||||||||||| ||| ||| ||||||||    
T  29714151 tgaaaataaatcaaatactttatagacaccaaaacaaactaaaataccgtagaag 29714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 10992836 - 10992908
Alignment:
Q  108 atctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacct 183  Q
    ||||||||||||||||||||    |||||||||||||||||||||  || |||| |   |||||||||||||||||    
T  10992836 atctgaaaataaatcaaatattttatagacaccaaaacaaaataaagtaccgtaaa---agagaacaatagcacct 10992908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 12893496 - 12893428
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaaca 174  Q
    |||| ||||||||||||||||||   ||| ||||||||| || |||| ||| || ||||||||||||||    
T  12893496 acatatgaaaataaatcaaatactctatatacaccaaaataatataaaataccgcagaagtagagaaca 12893428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 31884548 - 31884644
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || ||| | ||| | ||||||||||||||  || ||||  | ||| ||||||||||||||    
T  31884548 aaataaatcaaatactccatagaaaccaaaactaaacaaaataccataggattagagaacaatagcttctccgaagtaaactgaaattttagcacct 31884644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 335 - 516
Target Start/End: Complemental strand, 1831007 - 1830818
Alignment:
Q  335 atacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgatataaaatcaacgtta 434  Q
    |||||||| ||| ||||||| ||| |||| |||||||| |||||||||||| || |||||| |||| ||||||||||| ||||||| |||||||| ||||    
T  1831007 atacaagagctcctttgtatgctagaagtgcatcattcatctttttatatgttataagtatttctagcaagttcattatgatgatacaaaatcaatgtta 1830908  T
Q  435 gactgttgttaaaaacgtatctttga---------tttagcacacttaataatttatatcaataattttaccacacttatggtaagaaatt 516  Q
     ||| ||||||||   ||| |||| |         ||||| ||||||||||| ||||||||||||||||| |||||||||  |||||||||    
T  1830907 tactattgttaaatgtgta-ctttcaatggttaattttaggacacttaataacttatatcaataattttatcacacttataataagaaatt 1830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 13758494 - 13758596
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||| ||||||||||||||||||   ||||||||||||||| ||||| ||| |||||||||||||||||||||||| |  |||  |||||||||||||||    
T  13758494 acatatgaaaataaatcaaatactctatagacaccaaaacagaataaaataccgtagaagtagagaacaatagcacatgtgaagtagactaaaattttag 13758593  T
Q  206 cac 208  Q
    |||    
T  13758594 cac 13758596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 11680652 - 11680720
Alignment:
Q  352 tatactaaaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  11680652 tatactagaagtacatcattactctttttatatgctataagtatctctaacaagttcattatgatgata 11680720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 15060343 - 15060263
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  15060343 agacaacatctgaaaataaatcaaatactctatagacaccaaaacaaaataaaataccatagaagtagagaacaatagcac 15060263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 15603681 - 15603763
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacct 183  Q
    |||| |||||||||||||||||||||||  |||| |||  |||||||||||| ||||| ||||||||||||||||||||||||    
T  15603681 agacaacatctgaaaataaatcaaatacttcataaacattaaaacaaaataaaatatcatagaagtagagaacaatagcacct 15603763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 26817841 - 26817739
Alignment:
Q  79 actatcaaataaatgnnnnnnnagactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatag 178  Q
    |||||||||||||||       |||| |||||| ||||||||||||||||   ||||||||  ||||||||||| |||||||||||||||||||||||||    
T  26817841 actatcaaataaatggttttttagacgacatctaaaaataaatcaaatactgtatagacactcaaacaaaataaaatatcgtagaagtagagaacaatag 26817742  T
Q  179 cac 181  Q
    |||    
T  26817741 cac 26817739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 20990634 - 20990531
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||| ||||||   ||| ||||||||||||||| | |||||||| |||||||||| |||||||| | ||||  ||||| |||||||||    
T  20990634 acatctgaaaataaattaaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaagtagactgaaattttag 20990535  T
Q  206 cacc 209  Q
    ||||    
T  20990534 cacc 20990531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 14677966 - 14677904
Alignment:
Q  332 aagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaagta 394  Q
    ||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  14677966 aagatacaataactcatttgtatactacaaataaatcattcctctttttatatgctacaagta 14677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 18675553 - 18675445
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||||||||||||||| ||||||   ||| ||||||||||||||||| |||||| || ||||||||| |||| ||| | ||||  ||||| ||||    
T  18675553 agacaacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatatcgcaggagtagagaaaaataacacatgcgaagtagactgaaat 18675454  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  18675453 tttagcacc 18675445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 1831189 - 1831135
Alignment:
Q  279 taattaattacattttaaatttttggatagaaaattctccaatgttaaactcaaa 333  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  1831189 taattaattatattttaaacttttggatcgaaaattctccaatgttaaactcaaa 1831135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 1423155 - 1423079
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaata 177  Q
    |||| |||||||||||||||| ||||||   ||| ||||||||||||||||| ||||||||| ||||||||| ||||    
T  1423155 agacaacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatatcgtaggagtagagaaaaata 1423079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 30359842 - 30359770
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatag 178  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||| ||||||| ||| ||| ||||||||||    
T  30359842 acatctgaaaataaataaaatactccatagacactaaaacaaaatatgatatcggagacgtatagaacaatag 30359770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 11680511 - 11680577
Alignment:
Q  264 aagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaactc 330  Q
    |||||||||||||| ||||||| || |||||||| |||| |||  ||||||||||||||||||||||    
T  11680511 aagtatatcaacacgtaattaactaaattttaaagttttagatgcaaaattctccaatgttaaactc 11680577  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 33516368 - 33516433
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||||||| |||||||||| |||||| |  |||||||| |||||||||||||| |||||    
T  33516368 aaagtatatcaacacgtaattaattaaattttagacatttggatacaaaattctccaatgctaaac 33516433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 34043745 - 34043636
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  34043745 agacaacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 34043646  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  34043645 ttttagcacc 34043636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 14678088 - 14678024
Alignment:
Q  264 aagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    ||||||||||| || |||||||||| |||||| |  |||||||| ||||||||||||||||||||    
T  14678088 aagtatatcaatacgtaattaattaaattttagacatttggatacaaaattctccaatgttaaac 14678024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 30359025 - 30358953
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatag 178  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||  |||||| ||| ||| |||| |||||    
T  30359025 acatctgaaaataaatcaaatactccatagacactaaaacaaaatataatatcggagacgtacagaataatag 30358953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 1831304 - 1831233
Alignment:
Q  136 acaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagca 207  Q
    ||||||||||||||||| ||| || ||||||||||||||||| || || ||||  ||||| |||||||||||    
T  1831304 acaccaaaacaaaataaaataccgcagaagtagagaacaataacatctgcgaagtagactgaaattttagca 1831233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 11680382 - 11680456
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcac 181  Q
    ||||||||||||||||| | |||   |||||||| ||| |||||||| |||||||||||||| |||||||||||||    
T  11680382 acatctgaaaataaatctattactttatagacactaaa-caaaataaaatatcgtagaagtatagaacaatagcac 11680456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 1131939 - 1131897
Alignment:
Q  136 acaccaaaacaaaataagatatcgtagaagtagagaacaatag 178  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  1131939 acaccaaaacaaaataaaatatcgtagaagtagagaaaaatag 1131897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 1603570 - 1603461
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| |||||||| |||||||| | || ||||||||||||||| |||||||| |  |||  ||||| |||    
T  1603570 agacaacatctgaaaataaattaaatattttatacacaccaaaccaaaataaaaataccgtagaagtagagaaaaatagcacatgtgaagtagactgaaa 1603471  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  1603470 ttttagcacc 1603461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 4065096 - 4065157
Alignment:
Q  330 caaagatacaagaactcatttgtatactaaaagtacatcattcctctttttatatgctacaa 391  Q
    ||||||||||||||||| ||| |||  || ||| |||||||||||| |||||||||||||||    
T  4065096 caaagatacaagaactcctttatatgttacaagaacatcattcctcattttatatgctacaa 4065157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 14679197 - 14679258
Alignment:
Q  359 aaagtacatcattcctctttttatatgctacaagtatctctaacaagttcattacgatgata 420  Q
    ||||| || |||||||||||||||||| |||||||||||||| ||| ||||||  |||||||    
T  14679197 aaagtgcaacattcctctttttatatgttacaagtatctctatcaaattcattgtgatgata 14679258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 21442838 - 21442729
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataaga-tatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||||| | || |||||||||||| || |||||||| |  |||  |||||| ||    
T  21442838 agacaacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcacatgtgaagtagactagaa 21442739  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  21442738 ttttagcacc 21442729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 22012019 - 22012128
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaat-aagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaa 199  Q
    |||| |||||||||||||||| |||||    ||| ||||||||||||||| || ||| ||||||||||||||| |||||||  |  |||  ||||| |||    
T  22012019 agacaacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcatatgtgaagtagactgaaa 22012118  T
Q  200 ttttagcacc 209  Q
    ||||||||||    
T  22012119 ttttagcacc 22012128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 22525066 - 22524995
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagca 180  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||| ||| | ||||   ||||||||||||||    
T  22525066 acatctgaaaataaatcaaatactttatagacatcaaaacaaaataaaataccataga---agagaacaatagca 22524995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 1831102 - 1831063
Alignment:
Q  290 attttaaatttttggatagaaaattctccaatgttaaact 329  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  1831102 attttaaacttttggatggaaaattctccaatgttaaact 1831063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 1213178 - 1213124
Alignment:
Q  104 ctacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatc 158  Q
    |||||||||||||||||| |||||   |||||||| ||||||||||||| |||||    
T  1213178 ctacatctgaaaataaattaaatattccatagacatcaaaacaaaataaaatatc 1213124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 33516218 - 33516314
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    |||||||||||||||  |||||| |||||||| ||| || |||   ||| | ||||||||||||||  || ||||  ||||| ||||||||||||||    
T  33516218 aaataaatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagcttctccgaagtagactgaaattttagcacct 33516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 1768 - 1664
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||||||| ||  |||||||| |||| |||||||| ||| |||||||||||||||||||| ||| || |||  ||||| |||||||||    
T  1768 acatctgaaaataaatcaaacacttcatagacagcaaaccaaaataaaataccgtagaagtagagaacaataacacttatgaagtagactgaaattttag 1669  T
Q  206 cacct 210  Q
    |||||    
T  1668 cacct 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 1163 - 1065
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaatttta 204  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||| ||||| ||||| || ||||||||||||| | | ||  ||||||||||||||    
T  1163 acatatgaaaataaatcaaatactccatagacaccaaaacaaaataaaatatcatagaaatatagaacaatagcacatgcaaagtagactaaaatttta 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 2550 - 2615
Alignment:
Q  263 aaagtatatcaacacataattaattacattttaaatttttggatagaaaattctccaatgttaaac 328  Q
    |||||||||||||||||||||||||| |||||| |  |||||||| |||||| |||||||||||||    
T  2550 aaagtatatcaacacataattaattaaattttagacatttggatacaaaattatccaatgttaaac 2615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 1302 - 1198
Alignment:
Q  106 acatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttag 205  Q
    |||||||||||||||||||| ||  |||||||| |||| |||||||| ||| |||||||||||| ||||||| ||| | ||||   |||| |||||| ||    
T  1302 acatctgaaaataaatcaaacacttcatagacatcaaaccaaaataaaataccgtagaagtagaaaacaataacacttgcgaagttgactgaaatttcag 1203  T
Q  206 cacct 210  Q
    |||||    
T  1202 cacct 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 21083 - 21190
Alignment:
Q  101 agactacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaat 200  Q
    |||| |||| ||||||||||||||||||   || |||||||||||||| ||| ||| || | |||| |||||||||||||||||||||  ||||  ||||    
T  21083 agacaacatttgaaaataaatcaaatactctattgacaccaaaacaaa-taaaataccgcaaaagttgagaacaatagcacctacgaagtagaccgaaat 21181  T
Q  201 tttagcacc 209  Q
    |||||||||    
T  21182 tttagcacc 21190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 41159 - 41096
Alignment:
Q  114 aaataaatcaaataccacatagacaccaaaacaaaataagatatcgtagaagtagagaacaatagca 180  Q
    |||||||||||||||   ||||||||||||||||||||| ||||||||||   ||||||||||||||    
T  41159 aaataaatcaaatactttatagacaccaaaacaaaataaaatatcgtaga---agagaacaatagca 41096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 18276 - 18354
Alignment:
Q  132 atagacaccaaaacaaaataagatatcgtagaagtagagaacaatagcacctacgaaacagactaaaattttagcacct 210  Q
    ||||||| |||| |||||||| ||| | |||||||||||||||||| ||| || |||  ||||| ||||||||||||||    
T  18276 atagacagcaaaccaaaataaaataccatagaagtagagaacaataacacttatgaagtagactgaaattttagcacct 18354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 14341 - 14287
Alignment:
Q  104 ctacatctgaaaataaatcaaataccacatagacaccaaaacaaaataagatatc 158  Q
    |||||||||||||||||| |||||   |||||||| ||||||||||||| |||||    
T  14341 ctacatctgaaaataaattaaatattccatagacatcaaaacaaaataaaatatc 14287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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