View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2272_high_52 (Length: 334)
Name: NF2272_high_52
Description: NF2272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2272_high_52 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 320
Target Start/End: Complemental strand, 9438491 - 9438187
Alignment:
| Q |
16 |
atcattagtacaatccatcttgatcatgtatcataattaatagtaatttagctgagttagggttgagaacaattatatagtactagtacaattatacatg |
115 |
Q |
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| T |
9438491 |
atcattagtacaatccatcttgatcatgtatcgtaattaatagtaatttagctgagttagggttgagaacaattatatagtactagtacaattatacatg |
9438392 |
T |
|
| Q |
116 |
catatcttttagttatttttctgattcactgtcctaatgaaatttcattcacctacgtattaatatacagctgcaaagtacataaataaacgctgtatta |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
9438391 |
catatcttttagttatttttctgattcactgtcctaatgaaatttcattcacctacgtattaatatacagctgcaaagtacataaataaacgctgcatta |
9438292 |
T |
|
| Q |
216 |
ttattgttgaactaccataataccaagtttcattagtacaactcaaatgataaaagactgcatgaacatttgatattttagaacgcaaatttcaacgcac |
315 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
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| T |
9438291 |
ttattgttgaactaccataataccaagtttcaatagtacaactcagatgataaaagactgcatgaacatttgatatgttagaacgcaggtttcaacgcac |
9438192 |
T |
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| Q |
316 |
aattt |
320 |
Q |
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||||| |
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| T |
9438191 |
aattt |
9438187 |
T |
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