View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2272_low_67 (Length: 295)
Name: NF2272_low_67
Description: NF2272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2272_low_67 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 29231251 - 29230988
Alignment:
| Q |
16 |
atgcgtaaaattagtgtttatcagaactatgtaatgaaaaagttaaaaggaaagaaaatacagttatatcgatatatagaacctccattaagccaacaaa |
115 |
Q |
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| T |
29231251 |
atgcgtaaaattagtgtttatcagaactatgtaatgaaaaagttaaaaggaaagaaaatgcagttatatcgatatatagaacctctattaagccaacaaa |
29231152 |
T |
|
| Q |
116 |
taaaaagatgaaaaatatgagaagtatttagaaacatgtgatattaataatatgaagatctttactttgatcaataattatggttctcagtcgatagata |
215 |
Q |
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| T |
29231151 |
taaaaagatgaaaaatatgagaagtatttagaaacatgtgatattaataatatgaagatctttactttgatcaataattatggttctcagtcgatagata |
29231052 |
T |
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| Q |
216 |
tgcaacttacccaacatgcttacagttgg-aagatcgtaagggtaaaccctaaatatttgcata |
278 |
Q |
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||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
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| T |
29231051 |
tgcaacttacccaacatgcttacagttggaaagatcataagggtaaaccctaaatatttgcata |
29230988 |
T |
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