View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2272_low_79 (Length: 255)
Name: NF2272_low_79
Description: NF2272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2272_low_79 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 22362826 - 22362583
Alignment:
| Q |
1 |
aattttatgtagcctttctatattggtggaggagataatcaacaatctgtgctcgctggattcggaccgacaattcttgaaactgcatttaatgtaagct |
100 |
Q |
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| T |
22362826 |
aattttatgtagcctttctatattggtggaggagataatcaacaatctgtgcttgctggattcggaccgacaattcttgaaactgcatttaatgtaagct |
22362727 |
T |
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| Q |
101 |
attgcctaatgcagcaatattacaatatatcaagtggatctaaattgtgtattattattaattatcacttataggaatcaagagcaatgatagagagaat |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||||| |
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| T |
22362726 |
attgcctaatgtagcaatattacaatatatcaagtgggtctaaattgtgtattattgttaattaccacttataggaatcaagaacaaagatagagagaat |
22362627 |
T |
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| Q |
201 |
tttcaccaagaaacaagatggtccaattgtgttcattgatgatg |
244 |
Q |
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| T |
22362626 |
cttcaccaagaaacaagatggtccaattgtgttcattgatgatg |
22362583 |
T |
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