View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2272_low_95 (Length: 235)
Name: NF2272_low_95
Description: NF2272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2272_low_95 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 37763114 - 37762895
Alignment:
| Q |
1 |
cctcacgaaaaagcttagccttaccatacacactaatcatcgtattataagcaataagatcaggtacaatattaccggaacctttcaacgtattaaaaat |
100 |
Q |
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| T |
37763114 |
cctcacgaaaaagcttagccttaccatacacactaatcatcatattacaagcaataagatcaggtacaatattaccggaacctttcaacgcattaaaaat |
37763015 |
T |
|
| Q |
101 |
ggaaattgccttggaataatcacacaacttccgagaaagctcaatcaaattactatacaaaacaaggtcaccggaaacattacgacgttccatttgttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
37763014 |
ggaaattgccttggaataatcacacaacttccgagaaagctcaatcaaattactatacaaaacaaggtcaccggaaacattatcacgttccatttgttgc |
37762915 |
T |
|
| Q |
201 |
agccaaaagaaagaagaatc |
220 |
Q |
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|||||||||||||||||||| |
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| T |
37762914 |
agccaaaagaaagaagaatc |
37762895 |
T |
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