View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2274_low_13 (Length: 441)
Name: NF2274_low_13
Description: NF2274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2274_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 14 - 432
Target Start/End: Complemental strand, 572251 - 571833
Alignment:
| Q |
14 |
cgagcaaccttgtttcgacgagaattacgttgaacaagagttaaccccttttgatcagagctataaaagcactgaatacattggatttcctcagattcca |
113 |
Q |
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| T |
572251 |
cgagcaaccttgtttcgacgagaattacgttgaacaagagttaaccccttttgatcagagctataaaagcactgaatacattggatttcctcagattcca |
572152 |
T |
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| Q |
114 |
gaactcgatactgattttacttttccaatggaaagagttgatgaacacaatttatttgatgtgtttggtcccttggaaacatctgagtttggaatggttc |
213 |
Q |
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| T |
572151 |
gaactcgatactgattttacttttccaatggaaagagttgatgaacacaatttatttgatgtgtttggtcccttggaaacatctgagtttggaatggttc |
572052 |
T |
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| Q |
214 |
cnnnnnnngagccatcagggagttgcaaaattgataggttctttgatgattttccagaggacatgtttgataacattgagccaccttcaaatctctctaa |
313 |
Q |
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| T |
572051 |
ctttttttgagccatcagagagttgcaaaattgataggttctttgatgattttccagaggacatgtttgataacattgagccaccttcaaatttctctaa |
571952 |
T |
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| Q |
314 |
gctctgaattatgatagtttgtttgttgtagttgtgtttacattttgcaattaggggctgaaaagcatttgtaacacataggatctggttagtcattgta |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
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| T |
571951 |
gctctgaattatgatagtttgtttgttgtagttgtgtttacattttgcaattaggggcagaaaagtatttgtaacacataggatctggttagtcattgta |
571852 |
T |
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| Q |
414 |
atttgggattattgatgat |
432 |
Q |
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| T |
571851 |
atttgggattattgatgat |
571833 |
T |
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