View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2274_low_40 (Length: 236)
Name: NF2274_low_40
Description: NF2274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2274_low_40 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28094770 - 28094989
Alignment:
| Q |
1 |
ttatgatttcggatacggtttctgataagaacttttttatgtcttttatgacaacgtctacgctgtacgtgaggagaattccgtgacatactcttcgatc |
100 |
Q |
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| T |
28094770 |
ttatgatttcggatacggtttctgataagaacttttttatgtcttttatgacaacgtctacgctgtacgtgaggagaattccgtgacatactcttcgatc |
28094869 |
T |
|
| Q |
101 |
ctcttgcacgcgaatgtcgaacactcgtgttcctcttacaagctgattatagatggatatggtttggcattgtgcgaaaggacgagagattcctggtatg |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
28094870 |
ctcttgcacgcgaatgtcgaacacccgtgttcctcttacaagctgattatagatggataaggtttggcattgtgcgaaaggacgagagattcctggtatg |
28094969 |
T |
|
| Q |
201 |
ccgattttgtccgttgcaga |
220 |
Q |
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|||||||||||||||||||| |
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| T |
28094970 |
ccgattttgtccgttgcaga |
28094989 |
T |
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