View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2277_low_13 (Length: 341)
Name: NF2277_low_13
Description: NF2277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2277_low_13 |
 | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 7580979 - 7580668
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7580979 |
cttgcaacatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
7580880 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7580879 |
gaccgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
7580780 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7580779 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
7580680 |
T |
|
| Q |
320 |
caaacacctttg |
331 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7580679 |
caaacacctttg |
7580668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 20 - 331
Target Start/End: Original strand, 7100267 - 7100578
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7100267 |
cttgcatcatttcttgcacttttctttgtattacatctaactccattgaatcacacttttgttttgtcatggattctataatggaacacaaaatcccctt |
7100366 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||| |
|
|
| T |
7100367 |
gactgagaaaacctctgaaacacaaacccaaatttttgttttgaaattgtcactcaccctatcatcattgtaaaccaattgagaaagagttgtttttcca |
7100466 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7100467 |
acaccacctaaaccgacaatgggatagacggataggaagtcagagtcctttgcttgggtgagaagaaactcaacaatcttctctttatcatcttctcgtc |
7100566 |
T |
|
| Q |
320 |
caaacacctttg |
331 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
7100567 |
caaacatctttg |
7100578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 21 - 302
Target Start/End: Original strand, 17983745 - 17984026
Alignment:
| Q |
21 |
ttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttg |
120 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||| ||| ||||| | || |||| ||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
17983745 |
ttgcaacatttcttgcacctttctttgtattacctctaaacctatttcatcaaatttttgttctgtcatggattctataacggaacacaaaattcccttg |
17983844 |
T |
|
| Q |
121 |
actgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaa |
220 |
Q |
| |
|
|||||||| |||| |||||| |||||||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17983845 |
actgagaaaacctttgaaacccaaacccaaatttttgttttgaaaatttcactcacgttatcatcgttgtagaccaattgagcaagagttgtttttccaa |
17983944 |
T |
|
| Q |
221 |
caccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctc |
302 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17983945 |
caccacctaacccaacaatgggatagacggaaaggaagtcagagaacctcgcttgggtgagaagaaactcaacaatcttctc |
17984026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 30207368 - 30207671
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||||||||| | | ||| |||||| | |||| || |||||||||||||| |||||||||| ||| |
|
|
| T |
30207368 |
cttgcagcaattcctgcacctttctttgtattacatctaaattgaagccgtcatacttctctcttgtgatagattctataatggagcacaaaatcctctt |
30207467 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||| ||||| ||| |||||||||||||| |||||||| || |||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
30207468 |
gaccgagaaagtctcggaaacacaaacccatatttttgtattaaaattgctactcaccctagcatcattgtagaccaattgaacaagagttgtttttcca |
30207567 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| | |
|
|
| T |
30207568 |
acaccacctaaaccaacaatgggatagacggaaaggaagtcggagtccctcgcttgggtgagaagaaactcgataatcttctctttatcatcttctcgcc |
30207667 |
T |
|
| Q |
320 |
caaa |
323 |
Q |
| |
|
|||| |
|
|
| T |
30207668 |
caaa |
30207671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 29873020 - 29873323
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||||||||| | | || ||||||||| | |||| || ||||||||||||||||| |||||| ||| |
|
|
| T |
29873020 |
cttgcagcacttcttgcacctttctttccattacatctaattcgaagtcagcacacttctctcttgtgatagattctataatggaacaacaaatcctctt |
29873119 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||| ||||| ||| ||||||||||||||||| ||| | | |||||| |||||||||| |||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
29873120 |
gacagagaaagtctcagaaacacaaacccaaatatttttgtcaaaattgccactcaccctaacatcattgtagaccaattgaacgagagttgtttttcca |
29873219 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
29873220 |
ataccacctaaaccaacaatgggatagacggaaaggaagtcagagtccctcgcttgggtgagaagaaactcaacaatcttttctttatcatcttctcgtc |
29873319 |
T |
|
| Q |
320 |
caaa |
323 |
Q |
| |
|
|||| |
|
|
| T |
29873320 |
caaa |
29873323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 72 - 331
Target Start/End: Original strand, 30061270 - 30061529
Alignment:
| Q |
72 |
acacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtga |
171 |
Q |
| |
|
|||||||||| ||| || ||||||||||| ||||||||||||| ||| || ||||| ||| ||||||||||||||||||||| ||| |||||| | |
|
|
| T |
30061270 |
acacttctgtaatgtgatagattctataatagaacacaaaatcctctttaccgagaaagtctcagaaacacaaacccaaatttttttttcaaaattgcca |
30061369 |
T |
|
| Q |
172 |
ctcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcg |
271 |
Q |
| |
|
||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| | |
|
|
| T |
30061370 |
ctcaccctaacatcattgtagaccaattgaacaagagttgtttttccaacaccacctaaaccaactatgggatagacggaaaggaagtcagagtcccttg |
30061469 |
T |
|
| Q |
272 |
cttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| |||||||||||||||| |||| |
|
|
| T |
30061470 |
cttgggtgagaagaaactcaacaatcttttctttatcaacttctcgtccaaacacttttg |
30061529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 91 - 331
Target Start/End: Complemental strand, 30337714 - 30337474
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| ||||||||||||| ||| || ||||| ||| ||||||||||||||||||||| ||| |||||| |||||||||| |||| |||| |
|
|
| T |
30337714 |
gattctataatagaacacaaaatcctctttaccgagaaagtctcagaaacacaaacccaaatttttttttcaaaattgccactcaccctaacatcattgt |
30337615 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
30337614 |
agaccaattgaacaagagttgtttttccaacaccacctaaaccaactatgggatagacggaaaggaagtcagagtccttcgcttgggtgagaagaaactc |
30337515 |
T |
|
| Q |
291 |
aacaatcctctctttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
||||||| | ||||||||| |||||||||||||||| |||| |
|
|
| T |
30337514 |
aacaatcttttctttatcaacttctcgtccaaacacttttg |
30337474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 91 - 331
Target Start/End: Original strand, 30750563 - 30750803
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| ||||||||||||| ||| || ||||| ||| ||||||||||||||||||||| ||| ||||||| |||||||||| |||| |||| |
|
|
| T |
30750563 |
gattctataatagaacacaaaatcctctttaccgagaaagtctcagaaacacaaacccaaatttttttttcaaaattgtcactcaccctaacatcattgt |
30750662 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
30750663 |
agaccaattgaacaagagttgtttttccaacaccacctaaaccaactatgggatagacggaaaggaagtcagagtcccttgcttgggtgagaagaaactc |
30750762 |
T |
|
| Q |
291 |
aacaatcctctctttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
| ||||| | ||||||||| |||||||||||||||| |||| |
|
|
| T |
30750763 |
agcaatcttttctttatcaacttctcgtccaaacacttttg |
30750803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 20 - 331
Target Start/End: Original strand, 29854157 - 29854468
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| || |||||||||| |||||| | |||||||||| | | || || |||||| | |||| || ||||||| ||| ||||||||||| | ||| |
|
|
| T |
29854157 |
cttgcaacaattcttgcacccttctttccaatacatctaaatcaaagtcagcagacttctctcttgtgatagattctacaatagaacacaaaattctctt |
29854256 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||||||||| || ||||| ||||||||||||||| | | |||||| |||||||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
29854257 |
gactgagaaagtttcagaaacgcaaacccaaatttttttatcaaaattgccactcaccctaacatcattgtagaccaattgaagaagagttgtttttcca |
29854356 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
29854357 |
acaccacctaaaccaaaaatgggatagacggaaaggaagtctgagtccctcgtttgggtgagaagaaactcaacaatcttttctttatcatcttctcgtc |
29854456 |
T |
|
| Q |
320 |
caaacacctttg |
331 |
Q |
| |
|
||||||| |||| |
|
|
| T |
29854457 |
caaacacttttg |
29854468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 20 - 326
Target Start/End: Original strand, 30400920 - 30401226
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| || ||| |||||||| ||| | ||| || |||||||||| ||||||||||||| ||| |
|
|
| T |
30400920 |
cttgcaacaattcttgcacctttctttgtattacatctgaatccaaggcatcacatatctctcctgtaatatattctataatagaacacaaaatcctctt |
30401019 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||| ||||| ||| ||||||||||||||| | || | | |||| || ||||||||| |||| ||||||||||||||| ||||||||||||| ||| |
|
|
| T |
30401020 |
gacagagaaagtctcggaaacacaaacccaagatcttatgtcaaaatagtccctcaccctaacatcattgtagaccaattgaacaagagttgttttacca |
30401119 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
| |||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||| ||||| |
|
|
| T |
30401120 |
ataccacctaaaccaacaatggggtagacggaaaggaagtcagagtccctcgcatgggtgagaagaaactcaaaaatcttttctttatcatcttttcgtc |
30401219 |
T |
|
| Q |
320 |
caaacac |
326 |
Q |
| |
|
||||||| |
|
|
| T |
30401220 |
caaacac |
30401226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 40 - 326
Target Start/End: Original strand, 30476241 - 30476527
Alignment:
| Q |
40 |
tttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaatacctctgaaa |
139 |
Q |
| |
|
||||||||||||||||||||| ||| |||||| |||| | |||||| || ||||||||||||||||||||||||| ||||| ||||| ||| |||| |
|
|
| T |
30476241 |
tttctttgtattacatctaaatccaaggcatcaaacttgtcttttgtgatagattctataatggaacacaaaatccttttgacagagaaagtctccgaaa |
30476340 |
T |
|
| Q |
140 |
cacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaat |
239 |
Q |
| |
|
|||||| ||||| |||||| || |||||| ||| ||||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
30476341 |
cacaaatccaaacttttgtattaaaattgctacttaccctatgatcattgtagaccatttgagcaagtgttgttttaccaacaccacctaggccaacaat |
30476440 |
T |
|
| Q |
240 |
tggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtccaaacac |
326 |
Q |
| |
|
||||||| ||| |||||||| || | ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| |
|
|
| T |
30476441 |
aggatagatggataggaagtcagatacttgcgcttgggtgagaagaaactcgacaatcctctctctatcatctactcgtccaaacac |
30476527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 30 - 331
Target Start/End: Complemental strand, 17417843 - 17417542
Alignment:
| Q |
30 |
ttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaat |
129 |
Q |
| |
|
||||| |||||||||| ||| |||||||||| ||| ||||||||||| | | || |||||||| |||||||||||||||| ||||| |||||| |
|
|
| T |
17417843 |
ttctttcacctttcttagtaatacatctaaatccaaggcatcacactttccacctattatagattctatgatggaacacaaaatcctcttgattgagaaa |
17417744 |
T |
|
| Q |
130 |
acctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccaccta |
229 |
Q |
| |
|
| || |||||||||| |||||||||||| || |||||| |||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
17417743 |
gcatcagaaacacaaatccaaatttttgtattaaaattgctactcaccctaacatcattgtagaccaattgagctagagttgttttaccaataccaccta |
17417644 |
T |
|
| Q |
230 |
aaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtccaaacacctt |
329 |
Q |
| |
|
| ||||| || |||||||| ||||||| || | ||||| ||||||||||| ||||||||||||||| ||| | |||||||||| |||||||||||||| |
|
|
| T |
17417643 |
acccaactatgggatagactgaaaggatttcacaatcccttgcttgggtgagcagaaactcaacaatcttctttgtatcatcttcccgtccaaacacctt |
17417544 |
T |
|
| Q |
330 |
tg |
331 |
Q |
| |
|
|| |
|
|
| T |
17417543 |
tg |
17417542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 331
Target Start/End: Original strand, 30436671 - 30436970
Alignment:
| Q |
32 |
cttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaatac |
131 |
Q |
| |
|
||||||||||||||| |||||||||||| | | || ||||||||| | |||| || ||||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
30436671 |
cttgcacctttctttccattacatctaaatcaaagtcagcacacttctctcttgtgatagattctataatagaacacaaaatccttttgaccgagaaagt |
30436770 |
T |
|
| Q |
132 |
ctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaa |
231 |
Q |
| |
|
||| ||||||||||||||||||||| | | |||||| ||||||||||| |||| ||||||| ||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
30436771 |
ctcagaaacacaaacccaaatttttttatcaaaattgcgactcaccctaacatcattgtagatcaattgaacaagagttgtttttccaataccacctaaa |
30436870 |
T |
|
| Q |
232 |
ccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
||||||| |||||||| |||| ||||| |||||| |||| |||| |||||||||| |||||| | ||||||||||| |||| ||| ||||| |||| |
|
|
| T |
30436871 |
ccaacaacgggatagacagaaataaagtcagagtccttcgcaagggtaagaagaaactggacaatcttttctttatcatcgtctcttcctaacacttttg |
30436970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 30712617 - 30712398
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||||| ||| |||||||||||||||| |||| | | |||||| ||||||||||| |||| |||| |
|
|
| T |
30712617 |
gattctataatacaacacaaaatcctcttgaccgagaaagtctcagaaacacaaacccaaaattttttatcaaaattgcgactcaccctaacatcattgt |
30712518 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
||| ||||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
30712517 |
agatcaattgaacaagagttgtttttccaataccacctaaaccaacaatgggatagacagaaatgaagtcagagtccttcgcatgggtgagaagaaactc |
30712418 |
T |
|
| Q |
291 |
aacaatcctctctttatcat |
310 |
Q |
| |
|
|||||| | |||||||||| |
|
|
| T |
30712417 |
gacaatcttttctttatcat |
30712398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 91 - 316
Target Start/End: Original strand, 30484318 - 30484543
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||||| ||| ||||||||||||||||||||| | | |||||| ||||||||||| |||| |||| |
|
|
| T |
30484318 |
gattctataatacaacacaaaatcctcttgaccgagaaagtctcagaaacacaaacccaaatttttttatcaaaattgcgactcaccctaacatcattgt |
30484417 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
||| ||||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||| |||||| |||| | ||||||||||||||| |
|
|
| T |
30484418 |
agatcaattgaacaagagttgtttttccaataccacctaaaccaacaatgggatagacagaaatgaagttagagtccttcgcataggtgagaagaaactc |
30484517 |
T |
|
| Q |
291 |
aacaatcctctctttatcatcttctc |
316 |
Q |
| |
|
|||||| | ||||||||||| |||| |
|
|
| T |
30484518 |
gacaatcttttctttatcatcgtctc |
30484543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 103 - 331
Target Start/End: Complemental strand, 30676465 - 30676237
Alignment:
| Q |
103 |
gaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgag |
202 |
Q |
| |
|
||||||||||||| |||||| ||||| ||| |||||||||||||||| |||| | | |||| | |||||||||| |||| ||| ||| ||||||| |
|
|
| T |
30676465 |
gaacacaaaatcctcttgaccgagaaagtctcagaaacacaaacccaaacttttttatcaaaatggccactcaccctaacatcattgaagatcaattgaa |
30676366 |
T |
|
| Q |
203 |
caagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctc |
302 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||| |||||||| |||| |||||| |||||| |||| ||||||||||||||||| |||||| | || |
|
|
| T |
30676365 |
caagagttgtttttccaataccacctaaaccaaaaatgggatagacagaaatgaagtcagagtccttcgcatgggtgagaagaaactcgacaatcttttc |
30676266 |
T |
|
| Q |
303 |
tttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
|| |||| |||||||||||||||| |||| |
|
|
| T |
30676265 |
ttgatcaacttctcgtccaaacacttttg |
30676237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 317
Target Start/End: Complemental strand, 30520875 - 30520588
Alignment:
| Q |
30 |
ttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaat |
129 |
Q |
| |
|
||||||||| | || |||||| ||||||||| | | ||||||||||| | | ||| | ||||||||||| | ||||||||| || || ||||| |
|
|
| T |
30520875 |
ttcttgcacttgtcgttgtataacatctaaatctaaggcatcacacttttctcttgaaaaagattctataatagtacacaaaattttgttaacagagaaa |
30520776 |
T |
|
| Q |
130 |
acctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccaccta |
229 |
Q |
| |
|
|||| ||||||||||||||||||||||| | ||||||| |||||||| | ||| || || || |||||||||||||||||||| |||| |||||||| |
|
|
| T |
30520775 |
gcctcagaaacacaaacccaaatttttgtatcaaaattgtcactcacccggtgatcattataaactaattgagcaagagttgttttcccaataccaccta |
30520676 |
T |
|
| Q |
230 |
aaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcg |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| ||| ||| || | |||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
30520675 |
agccaacaattggatagatggaaaggaggtcagagccctttgcttgggtgagaagaaactcgacaatcttctctttatcatcttctcg |
30520588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 317
Target Start/End: Complemental strand, 30561215 - 30560928
Alignment:
| Q |
30 |
ttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaat |
129 |
Q |
| |
|
||||||||| | || |||||| ||||||||| | | ||||||||||| | | ||| | ||||||||||| | ||||||||| || || ||||| |
|
|
| T |
30561215 |
ttcttgcacttgtcgttgtataacatctaaatctaaggcatcacacttttctcttgaaaaagattctataatagtacacaaaattttgttaacagagaaa |
30561116 |
T |
|
| Q |
130 |
acctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccaccta |
229 |
Q |
| |
|
|||| ||||||||||||||||||||||| | ||||||| |||||||| | ||| || || || |||||||||||||||||||| |||| |||||||| |
|
|
| T |
30561115 |
gcctcagaaacacaaacccaaatttttgtatcaaaattgtcactcacccggtgatcattataaactaattgagcaagagttgttttcccaataccaccta |
30561016 |
T |
|
| Q |
230 |
aaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcg |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| ||| ||| || | |||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
30561015 |
agccaacaattggatagatggaaaggaggtcagagccctttgcttgggtgagaagaaactcgacaatcttctctttatcatcttctcg |
30560928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 96 - 331
Target Start/End: Complemental strand, 30241565 - 30241330
Alignment:
| Q |
96 |
tataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagacc |
195 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| ||| |||||||||||||||| ||| || || |||||| |||||| || |||| ||||||||| |
|
|
| T |
30241565 |
tataatggaacacaaaatcctgttgacagagaaattctcagaaacacaaacccaaactttagtattaaaattgctactcacggtaacatcattgtagacc |
30241466 |
T |
|
| Q |
196 |
aattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaa |
295 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||| |||| || ||||||| |||||||||||| |||||| | ||||||||||||||||||| | || |
|
|
| T |
30241465 |
gattgaagaagagtggtttttccaagaccacctaacccaaaaacgggatagatggaaaggaagtcggagtcctttgcttgggtgagaagaaactggataa |
30241366 |
T |
|
| Q |
296 |
tcctctctttatcatcttctcgtccaaacacctttg |
331 |
Q |
| |
|
|| ||| |||||| ||||||||||||||||| |||| |
|
|
| T |
30241365 |
tcttctttttatcgtcttctcgtccaaacacttttg |
30241330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 30330350 - 30330200
Alignment:
| Q |
139 |
acacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaa |
238 |
Q |
| |
|
||||||||||||||| || | || ||||| |||||||||| ||| | || || |||| || ||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
30330350 |
acacaaacccaaattattatattaaaatttccactcaccctaatatcatcgtggatcaatcgaacaatagttgtttttccaatacctcctaaaccaacta |
30330251 |
T |
|
| Q |
239 |
ttggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaact |
289 |
Q |
| |
|
| ||||||| |||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
30330250 |
tgggatagatggaaaggaagtcagtgtccctcgcttgggtgagaagaaact |
30330200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 166; Significance: 8e-89; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 30 - 323
Target Start/End: Complemental strand, 25293197 - 25292904
Alignment:
| Q |
30 |
ttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatccccttgactgagaat |
129 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | | ||||||||||||| | | || || ||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
25293197 |
ttcttacacctttctttgtattacatctaaatcaaaggcatcacacttctctctagtgatagattctataatggaacacaaaatcctcttgaccgagaaa |
25293098 |
T |
|
| Q |
130 |
acctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttccaacaccaccta |
229 |
Q |
| |
|
||| ||||||||||||||||||||||| || ||| || |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25293097 |
gtctcagaaacacaaacccaaatttttgtattaaaagtgctactcaccctaacatcattgtagaccaattgaacaagagttgtttttccaacaccaccta |
25292998 |
T |
|
| Q |
230 |
aaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtccaaa |
323 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| |||||||| |||||||| ||||||||||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
25292997 |
aaccaacaatgggatggacggaaaggaagtcagagtcccttgcttgggtaagaagaaactcgacagtcttctctttatcatcttctcgtccaaa |
25292904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 38939140 - 38939073
Alignment:
| Q |
181 |
tcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagac |
248 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||| | |||||| |
|
|
| T |
38939140 |
tcattgttgtagaccaattgagcaagtgttgtttttccatatccacctagaccaacaatggaatagac |
38939073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 7053047 - 7053009
Alignment:
| Q |
181 |
tcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
7053047 |
tcatcgttatagaccaattgagcaagtgttgtttttcca |
7053009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 151; Significance: 7e-80; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 20 - 331
Target Start/End: Original strand, 13617443 - 13617756
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | || |
|
|
| T |
13617443 |
cttgcagcatttcttgcacctttctttgtattacatctaaatatgttgcatcacacttctgttttgtcatggattctataatggaaagcaaaattctcta |
13617542 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagag--ttgtttttc |
217 |
Q |
| |
|
|| |||||| |||||| ||| ||| ||||||||||||||||||||||||| || |||| ||||||| || ||||| | ||||||| ||| || ||||| |
|
|
| T |
13617543 |
gattgagaaaacctctaaaatacatacccaaatttttgttttgaaattgtcacccaccttatcatcattttagacaatttgagcaggagttttttttttg |
13617642 |
T |
|
| Q |
218 |
caacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcg |
317 |
Q |
| |
|
|||||||||||||||||||||| |||||| | ||||| ||||| ||| ||||| ||||||||||| ||||| ||||||| ||||||||| ||||| ||| |
|
|
| T |
13617643 |
caacaccacctaaaccaacaatgggatagtcagaaagaaagtcagaggccctcacttgggtgagatgaaacctaacaatcttctctttattatcttatcg |
13617742 |
T |
|
| Q |
318 |
tccaaacacctttg |
331 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
13617743 |
tccaaacacctttg |
13617756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 52352805 - 52353108
Alignment:
| Q |
20 |
cttgcatcatttcttgcacctttctttgtattacatctaaacccattgcatcacacttctgttttgtcatggattctataatggaacacaaaatcccctt |
119 |
Q |
| |
|
|||||| || ||||||| | |||||||||| ||||||||| | | |||||||||| | | |||| || ||||||||||||||||||||||||| || |
|
|
| T |
52352805 |
cttgcaacaattcttgcgctcttctttgtatcacatctaaatctaagccatcacacttttctcttgtaatagattctataatggaacacaaaatcctatt |
52352904 |
T |
|
| Q |
120 |
gactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgtagaccaattgagcaagagttgtttttcca |
219 |
Q |
| |
|
||| ||||| |||| ||||||||||||||||||||| | | || || | |||||| ||| |||| ||||||||||||||| ||||||||||||| ||| |
|
|
| T |
52352905 |
gacagagaaatcctcagaaacacaaacccaaatttttctatgaaattttttactcactctaacatcattgtagaccaattgaacaagagttgttttacca |
52353004 |
T |
|
| Q |
220 |
acaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactcaacaatcctctctttatcatcttctcgtc |
319 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||||||| | | ||||||||||||||||||||||| ||||| |||||||||| |||| |||| |
|
|
| T |
52353005 |
acaccacctaaaccaacaataggatacacaacaaggaagtcaaacttactcgcttgggtgagaagaaactcggcaatcttctctttatcttctttccgtc |
52353104 |
T |
|
| Q |
320 |
caaa |
323 |
Q |
| |
|
|||| |
|
|
| T |
52353105 |
caaa |
52353108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 316
Target Start/End: Complemental strand, 20295771 - 20295546
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| |||| |||||||| || || ||||| ||| |||||||||||||||||| || | | |||||| |||||| | |||||| |||| |
|
|
| T |
20295771 |
gattctataatagaacgcaaaatcctctcgaaggagaaagtctcagaaacacaaacccaaattcttttatcaaaattgccactcacgcgatcatcattgt |
20295672 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
20295671 |
agactaattgaacaagagttgtttttccaataccacctaaaccaacaatgggatagacagaaatgaagtcagagtccttcgcatgggtgagaagaaactc |
20295572 |
T |
|
| Q |
291 |
aacaatcctctctttatcatcttctc |
316 |
Q |
| |
|
|||||| | | ||||||||| |||| |
|
|
| T |
20295571 |
gacaatcttttttttatcatcgtctc |
20295546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 91 - 316
Target Start/End: Original strand, 26708249 - 26708474
Alignment:
| Q |
91 |
gattctataatggaacacaaaatccccttgactgagaatacctctgaaacacaaacccaaatttttgttttgaaattgtgactcaccctatcatcgttgt |
190 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||| | | ||||||| |||||||||| ||||||||| |
|
|
| T |
26708249 |
gattctataatagaacacaaaatcctcttgactgagaaagtctcagaaacacaaacccaaatttttttatcaaaattgtcactcaccctaacatcgttgt |
26708348 |
T |
|
| Q |
191 |
agaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagacggaaaggaagtccgagtccctcgcttgggtgagaagaaactc |
290 |
Q |
| |
|
||| ||| ||| |||||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
26708349 |
agatcaactgaacaagagttgtttttccaataccacctaagccaacaatgggatagacagaaatgaagtcagagtccttcgcatgggtgagaagaaactc |
26708448 |
T |
|
| Q |
291 |
aacaatcctctctttatcatcttctc |
316 |
Q |
| |
|
|||||| | ||||||||||| |||| |
|
|
| T |
26708449 |
gacaatcttttctttatcatcgtctc |
26708474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 13378471 - 13378538
Alignment:
| Q |
181 |
tcatcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagac |
248 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||| | |||||| |
|
|
| T |
13378471 |
tcatcgttgtacaccaattgagcaagtgttgtttttccatatccacctaggccaacaatggaatagac |
13378538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 9527 - 9591
Alignment:
| Q |
184 |
tcgttgtagaccaattgagcaagagttgtttttccaacaccacctaaaccaacaattggatagac |
248 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||| ||||||| |||||||| | |||||| |
|
|
| T |
9527 |
tcgttgtaaaccaattgagcaagtgttgtttttccatatccacctaggccaacaatggaatagac |
9591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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