View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2277_low_14 (Length: 335)

Name: NF2277_low_14
Description: NF2277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2277_low_14
NF2277_low_14
[»] chr7 (36 HSPs)
chr7 (19-323)||(41945749-41946053)
chr7 (75-220)||(11016866-11017011)
chr7 (75-220)||(4290542-4290687)
chr7 (74-220)||(38975802-38975948)
chr7 (75-191)||(42628321-42628437)
chr7 (103-220)||(34854719-34854836)
chr7 (111-215)||(27028825-27028929)
chr7 (105-220)||(41018254-41018369)
chr7 (74-185)||(48000769-48000880)
chr7 (98-220)||(15027539-15027661)
chr7 (136-220)||(45231907-45231991)
chr7 (119-190)||(10419485-10419556)
chr7 (76-154)||(48000691-48000769)
chr7 (76-141)||(34854771-34854836)
chr7 (103-191)||(4649346-4649436)
chr7 (76-135)||(45231932-45231991)
chr7 (150-224)||(27028721-27028795)
chr7 (103-191)||(29053338-29053426)
chr7 (76-127)||(4290542-4290593)
chr7 (157-224)||(4290623-4290690)
chr7 (117-191)||(7671949-7672023)
chr7 (162-224)||(11016952-11017014)
chr7 (83-141)||(27028732-27028790)
chr7 (76-141)||(11016866-11016931)
chr7 (76-141)||(38975802-38975867)
chr7 (97-141)||(22764776-22764820)
chr7 (132-199)||(22764753-22764820)
chr7 (157-224)||(42628373-42628440)
chr7 (83-141)||(27028869-27028927)
chr7 (157-227)||(41945933-41946003)
chr7 (75-139)||(41945851-41945915)
chr7 (76-127)||(41018318-41018369)
chr7 (157-220)||(48000691-48000754)
chr7 (97-130)||(43352871-43352904)
chr7 (76-109)||(48249556-48249589)
chr7 (157-221)||(38975883-38975947)
[»] chr4 (50 HSPs)
chr4 (75-220)||(6271699-6271844)
chr4 (69-224)||(44379923-44380078)
chr4 (85-218)||(23444275-23444408)
chr4 (83-224)||(35682159-35682300)
chr4 (75-220)||(51265442-51265587)
chr4 (75-191)||(42375036-42375152)
chr4 (78-199)||(47661860-47661981)
chr4 (103-193)||(40789203-40789293)
chr4 (105-191)||(47404611-47404697)
chr4 (105-224)||(26186042-26186159)
chr4 (83-191)||(53954636-53954744)
chr4 (106-190)||(55090023-55090107)
chr4 (130-220)||(30861825-30861915)
chr4 (102-218)||(47762607-47762723)
chr4 (157-224)||(6271780-6271847)
chr4 (76-191)||(38714849-38714964)
chr4 (97-168)||(25818391-25818462)
chr4 (157-224)||(42375088-42375155)
chr4 (105-191)||(52028575-52028661)
chr4 (163-226)||(5048884-5048947)
chr4 (74-133)||(5048884-5048943)
chr4 (105-168)||(50384131-50384194)
chr4 (157-224)||(51265523-51265590)
chr4 (76-141)||(51265442-51265507)
chr4 (75-135)||(44379926-44379986)
chr4 (74-141)||(3862622-3862689)
chr4 (74-141)||(3871379-3871446)
chr4 (78-141)||(23444345-23444408)
chr4 (157-224)||(47661920-47661987)
chr4 (157-231)||(23444255-23444329)
chr4 (66-128)||(30709989-30710051)
chr4 (152-221)||(3862619-3862688)
chr4 (152-221)||(3871376-3871445)
chr4 (76-141)||(6271699-6271764)
chr4 (165-222)||(30709986-30710043)
chr4 (158-227)||(44380009-44380078)
chr4 (157-198)||(47762686-47762727)
chr4 (78-138)||(47762607-47762667)
chr4 (105-155)||(24006096-24006146)
chr4 (75-141)||(26186090-26186156)
chr4 (117-155)||(28693961-28693999)
chr4 (174-227)||(19184493-19184546)
chr4 (76-141)||(30861850-30861915)
chr4 (106-191)||(31532716-31532801)
chr4 (75-128)||(35682162-35682215)
chr4 (115-168)||(45591446-45591499)
chr4 (65-125)||(50041892-50041952)
chr4 (65-125)||(50049114-50049174)
chr4 (75-107)||(55090001-55090033)
chr4 (75-107)||(55090097-55090129)
[»] chr3 (40 HSPs)
chr3 (74-213)||(50524706-50524845)
chr3 (74-220)||(41752961-41753107)
chr3 (78-220)||(51046072-51046214)
chr3 (74-213)||(30580751-30580890)
chr3 (83-224)||(30734406-30734547)
chr3 (105-227)||(33689166-33689288)
chr3 (74-191)||(1801441-1801558)
chr3 (97-218)||(47492065-47492186)
chr3 (106-227)||(55223222-55223343)
chr3 (111-227)||(18321641-18321757)
chr3 (105-190)||(30476500-30476585)
chr3 (105-218)||(43139735-43139848)
chr3 (75-150)||(45103105-45103180)
chr3 (105-191)||(29031740-29031826)
chr3 (105-191)||(49418717-49418803)
chr3 (66-141)||(33689163-33689238)
chr3 (105-199)||(50549993-50550087)
chr3 (119-191)||(47677295-47677367)
chr3 (76-221)||(41752961-41753106)
chr3 (157-224)||(21024088-21024154)
chr3 (157-224)||(45103102-45103169)
chr3 (78-141)||(47492123-47492186)
chr3 (162-224)||(51046066-51046128)
chr3 (157-221)||(1801442-1801506)
chr3 (85-141)||(18321657-18321713)
chr3 (161-221)||(30580752-30580812)
chr3 (83-126)||(55223236-55223279)
chr3 (168-226)||(50524791-50524849)
chr3 (80-141)||(30580832-30580893)
chr3 (75-128)||(30734491-30734544)
chr3 (74-109)||(35538962-35538997)
chr3 (136-191)||(39385745-39385800)
chr3 (78-141)||(43139785-43139848)
chr3 (74-141)||(50524697-50524764)
chr3 (76-127)||(51046163-51046214)
chr3 (189-228)||(55223333-55223372)
chr3 (102-150)||(21024117-21024165)
chr3 (105-141)||(29031790-29031826)
chr3 (116-172)||(30904289-30904345)
chr3 (89-129)||(34060203-34060243)
[»] chr5 (50 HSPs)
chr5 (83-224)||(12913796-12913937)
chr5 (74-220)||(19655155-19655301)
chr5 (75-220)||(291094-291239)
chr5 (78-191)||(28818943-28819056)
chr5 (105-227)||(16439128-16439250)
chr5 (75-199)||(29699385-29699509)
chr5 (78-218)||(30117827-30117967)
chr5 (75-191)||(16971170-16971286)
chr5 (75-191)||(3899865-3899981)
chr5 (105-228)||(3180086-3180208)
chr5 (75-168)||(2953239-2953332)
chr5 (157-218)||(28818995-28819056)
chr5 (162-224)||(11983249-11983310)
chr5 (75-160)||(2093933-2094018)
chr5 (132-220)||(19598329-19598417)
chr5 (157-224)||(29699445-29699512)
chr5 (68-191)||(26662425-26662549)
chr5 (68-191)||(26934020-26934144)
chr5 (157-224)||(2093930-2093997)
chr5 (157-224)||(2953268-2953335)
chr5 (76-221)||(19655155-19655300)
chr5 (157-229)||(16971222-16971294)
chr5 (157-227)||(26662477-26662548)
chr5 (157-227)||(26934072-26934143)
chr5 (78-141)||(30117904-30117967)
chr5 (110-185)||(38134404-38134479)
chr5 (162-224)||(291180-291242)
chr5 (75-141)||(16439134-16439200)
chr5 (117-191)||(16802470-16802544)
chr5 (78-150)||(19272265-19272337)
chr5 (69-168)||(228399-228498)
chr5 (157-224)||(3899917-3899984)
chr5 (83-134)||(12913807-12913858)
chr5 (87-141)||(1638465-1638519)
chr5 (98-144)||(7009401-7009447)
chr5 (76-126)||(19598329-19598379)
chr5 (83-140)||(291101-291158)
chr5 (162-227)||(1638447-1638512)
chr5 (75-152)||(11983252-11983328)
chr5 (83-150)||(2356339-2356405)
chr5 (157-224)||(14167146-14167212)
chr5 (162-224)||(13312257-13312319)
chr5 (83-125)||(31147141-31147183)
chr5 (69-135)||(32485631-32485697)
chr5 (157-214)||(12913881-12913938)
chr5 (162-227)||(32485632-32485697)
chr5 (85-141)||(3180136-3180191)
chr5 (83-135)||(13312268-13312320)
chr5 (164-220)||(37219700-37219756)
chr5 (78-126)||(39031242-39031290)
[»] scaffold0586 (2 HSPs)
scaffold0586 (83-230)||(7051-7197)
scaffold0586 (69-141)||(7123-7194)
[»] chr8 (42 HSPs)
chr8 (81-220)||(10086754-10086893)
chr8 (76-234)||(5667080-5667238)
chr8 (75-220)||(5033158-5033303)
chr8 (75-220)||(35440965-35441110)
chr8 (75-220)||(33841587-33841732)
chr8 (83-228)||(8796411-8796556)
chr8 (78-230)||(43844470-43844620)
chr8 (75-191)||(39850981-39851097)
chr8 (106-220)||(8243415-8243529)
chr8 (105-227)||(34229631-34229753)
chr8 (74-220)||(45191122-45191268)
chr8 (83-227)||(4958590-4958732)
chr8 (147-220)||(2581822-2581895)
chr8 (75-140)||(5667093-5667158)
chr8 (78-191)||(6296631-6296744)
chr8 (69-141)||(8796412-8796484)
chr8 (157-224)||(5033239-5033306)
chr8 (104-224)||(35031639-35031760)
chr8 (78-141)||(43844545-43844608)
chr8 (76-141)||(8243464-8243529)
chr8 (76-141)||(10086754-10086819)
chr8 (76-141)||(22649842-22649907)
chr8 (76-141)||(35441045-35441110)
chr8 (157-220)||(22649842-22649905)
chr8 (157-224)||(33841584-33841651)
chr8 (157-224)||(35440962-35441029)
chr8 (76-141)||(5033158-5033223)
chr8 (76-141)||(45191203-45191268)
chr8 (103-154)||(13470042-13470093)
chr8 (97-168)||(31159900-31159971)
chr8 (105-172)||(34541829-34541896)
chr8 (83-126)||(35031706-35031749)
chr8 (162-221)||(45191123-45191182)
chr8 (166-224)||(1880232-1880289)
chr8 (157-227)||(6296683-6296753)
chr8 (157-199)||(31159929-31159971)
chr8 (182-228)||(39851058-39851104)
chr8 (76-141)||(2581822-2581887)
chr8 (76-141)||(33841667-33841732)
chr8 (157-225)||(8796500-8796568)
chr8 (157-193)||(39139839-39139875)
chr8 (166-218)||(43844470-43844522)
[»] chr1 (52 HSPs)
chr1 (75-220)||(29179593-29179738)
chr1 (75-220)||(48993913-48994058)
chr1 (86-224)||(32540755-32540893)
chr1 (78-191)||(15220837-15220950)
chr1 (74-220)||(5995366-5995512)
chr1 (105-220)||(37155043-37155158)
chr1 (103-220)||(48498412-48498529)
chr1 (105-190)||(48604973-48605058)
chr1 (75-191)||(49444909-49445023)
chr1 (117-221)||(1091582-1091686)
chr1 (87-227)||(17127572-17127712)
chr1 (83-191)||(29371394-29371502)
chr1 (70-189)||(33219601-33219720)
chr1 (105-227)||(4608986-4609108)
chr1 (130-228)||(36290458-36290556)
chr1 (103-191)||(5694914-5695001)
chr1 (103-191)||(8337875-8337963)
chr1 (111-227)||(45728277-45728393)
chr1 (111-230)||(9157297-9157416)
chr1 (117-191)||(741540-741614)
chr1 (105-218)||(44706809-44706923)
chr1 (105-191)||(38674531-38674615)
chr1 (117-191)||(34062235-34062309)
chr1 (105-179)||(47303433-47303507)
chr1 (141-227)||(21630032-21630118)
chr1 (146-224)||(28395630-28395708)
chr1 (111-189)||(46333978-46334056)
chr1 (76-141)||(46931994-46932059)
chr1 (157-224)||(48993910-48993977)
chr1 (76-141)||(29179673-29179738)
chr1 (76-141)||(37155043-37155108)
chr1 (85-141)||(28395643-28395699)
chr1 (74-141)||(1091620-1091687)
chr1 (105-160)||(1819515-1819570)
chr1 (157-224)||(49444906-49444973)
chr1 (75-141)||(32540824-32540890)
chr1 (162-220)||(46931994-46932052)
chr1 (64-141)||(21630027-21630104)
chr1 (76-141)||(36290483-36290548)
chr1 (78-127)||(44706874-44706923)
chr1 (76-141)||(48498412-48498477)
chr1 (76-141)||(48993993-48994058)
chr1 (103-155)||(28928803-28928855)
chr1 (165-221)||(36381588-36381644)
chr1 (74-141)||(9157305-9157372)
chr1 (157-224)||(15220889-15220956)
chr1 (157-224)||(29179590-29179657)
chr1 (74-137)||(46932062-46932124)
chr1 (69-154)||(12441018-12441103)
chr1 (157-222)||(33219651-33219716)
chr1 (157-221)||(5995447-5995511)
chr1 (68-128)||(31342252-31342312)
[»] chr6 (17 HSPs)
chr6 (105-218)||(551191-551304)
chr6 (83-227)||(17750893-17751036)
chr6 (78-199)||(13043475-13043596)
chr6 (85-191)||(12343126-12343232)
chr6 (120-224)||(24587454-24587558)
chr6 (83-179)||(24618605-24618701)
chr6 (103-190)||(10521873-10521960)
chr6 (133-191)||(31654331-31654389)
chr6 (83-140)||(17750907-17750963)
chr6 (157-224)||(13043535-13043602)
chr6 (83-141)||(24587465-24587523)
chr6 (76-142)||(24975749-24975815)
chr6 (166-234)||(24618584-24618652)
chr6 (157-224)||(17750980-17751047)
chr6 (157-220)||(24975749-24975812)
chr6 (105-155)||(2315330-2315380)
chr6 (157-211)||(12343178-12343232)
[»] chr2 (38 HSPs)
chr2 (75-220)||(16514421-16514566)
chr2 (75-194)||(6721974-6722093)
chr2 (74-220)||(29508685-29508832)
chr2 (83-189)||(14229357-14229462)
chr2 (83-228)||(14470596-14470740)
chr2 (83-227)||(24115910-24116054)
chr2 (77-191)||(6217222-6217336)
chr2 (75-191)||(38933613-38933729)
chr2 (162-228)||(32545871-32545937)
chr2 (76-142)||(33018620-33018686)
chr2 (75-221)||(32545782-32545930)
chr2 (117-200)||(37762039-37762122)
chr2 (105-191)||(2828610-2828696)
chr2 (61-155)||(37961768-37961862)
chr2 (106-199)||(15011298-15011391)
chr2 (111-191)||(2893989-2894069)
chr2 (78-154)||(14892323-14892399)
chr2 (157-224)||(38933665-38933732)
chr2 (89-191)||(29925580-29925682)
chr2 (107-203)||(8534160-8534256)
chr2 (75-205)||(1945408-1945532)
chr2 (157-224)||(16514502-16514569)
chr2 (83-140)||(9173058-9173115)
chr2 (157-221)||(37961784-37961848)
chr2 (158-229)||(14892339-14892410)
chr2 (157-224)||(35204145-35204212)
chr2 (157-219)||(6217222-6217284)
chr2 (157-215)||(14229355-14229413)
chr2 (97-141)||(15011298-15011342)
chr2 (87-135)||(24115928-24115976)
chr2 (164-220)||(30610261-30610316)
chr2 (157-213)||(33018623-33018679)
chr2 (168-227)||(14470582-14470641)
chr2 (76-123)||(16514421-16514468)
chr2 (76-127)||(29508781-29508832)
chr2 (162-224)||(6722034-6722096)
chr2 (142-215)||(9173044-9173117)
chr2 (157-190)||(14464582-14464615)
[»] scaffold0161 (2 HSPs)
scaffold0161 (76-220)||(27217-27361)
scaffold0161 (76-127)||(27310-27361)
[»] scaffold0016 (2 HSPs)
scaffold0016 (75-191)||(49699-49815)
scaffold0016 (157-224)||(49696-49763)
[»] scaffold0047 (1 HSPs)
scaffold0047 (105-191)||(63783-63869)
[»] scaffold0180 (2 HSPs)
scaffold0180 (83-155)||(19126-19198)
scaffold0180 (157-226)||(19113-19182)
[»] scaffold0481 (1 HSPs)
scaffold0481 (105-155)||(2913-2963)
[»] scaffold0536 (1 HSPs)
scaffold0536 (97-199)||(4910-5009)
[»] scaffold1033 (1 HSPs)
scaffold1033 (111-165)||(2265-2319)
[»] scaffold1029 (1 HSPs)
scaffold1029 (111-165)||(2265-2319)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 41946053 - 41945749
Alignment:
Q  19 gggtatcatattcattccattgcatacctccctcggggaatgaataatagggatgacacttggatgacatagagttgagtgacattggtgatattggtca 118  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||    
T  41946053 gggtatcatattcattctattgcatacctcccttggggaatgaataatagggataacacttgggtgacataaagttgagtgacattggtaatattggtca 41945954  T
Q  119 atcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaa 218  Q
    ||||||||||||||||| |||||||||||| | ||||||||  ||| |||||||||||||||| ||||||| |||| |||||||||||||||||| | ||    
T  41945953 atcacaatgttacaatgcttgtgaaagagaaaaaaacgcaaacattatgacattatgattgactaatgtcatcaatgtcactcaattctatgtcatctaa 41945854  T
Q  219 gtgctatccgaataatagaaggagattgcggaatgggatggaatcataccttccatcatatttcataccattccattcactttctaaaaatccaaaaata 318  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41945853 gtgctacccgaataatagaaggagattgcggaatgggatggaatcataccttccatcatatttcgtaccattccattcactttctaaaaatccaaaaata 41945754  T
Q  319 atatt 323  Q
    |||||    
T  41945753 atatt 41945749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 11017011 - 11016866
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||| |||| |||||| |||| |    
T  11017011 cacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgt 11016912  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  11016911 gattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 11016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 4290687 - 4290542
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | || |||||| |||| |    
T  4290687 cacttgggtgacatacagttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgt 4290588  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  4290587 gattgaccaatatcaccaatatcacccaactctatgtcacccaagt 4290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 38975948 - 38975802
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||| | ||||||||||||  ||||||||||||| |||| ||||| | ||||  |||||| ||||||||||||||||||| |||| |||||| ||||     
T  38975948 acacttaggtgacatagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattg 38975849  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||||||||||| |||||| |||| ||| ||||||||||||||||    
T  38975848 tgattgaccaatgttaccaatgtcacccaactctatgtcacccaagt 38975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 42628437 - 42628321
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||  ||| |||||| |||| |    
T  42628437 cacttgggtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgt 42628338  T
Q  175 gattgaccaatgtcacc 191  Q
    |||||  ||||||||||    
T  42628337 gattggtcaatgtcacc 42628321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 34854719 - 34854836
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactca 202  Q
    ||||||| ||||| |||||||||||  |||||| |||||||||||| |||||| |||  |||||| |||| ||||||||||||||||||||| |||| ||    
T  34854719 ttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcaccca 34854818  T
Q  203 attctatgtcacccaagt 220  Q
    | ||||||||||||||||    
T  34854819 actctatgtcacccaagt 34854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 27028825 - 27028929
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatg 210  Q
    ||||| |||||||||||| |||||| || |||||||||||||||| |||  ||||||||||| |||||||||||||||||||| ||||| ||| ||||||    
T  27028825 attggacaatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcaccaacatcacccaagtctatg 27028924  T
Q  211 tcacc 215  Q
    |||||    
T  27028925 tcacc 27028929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 41018254 - 41018369
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| ||||| ||||||||||||  ||||| |||||||||||||||||||  ||| |||||| |||| ||||||  ||||||||||||| |||| |||     
T  41018254 ggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaac 41018353  T
Q  205 tctatgtcacccaagt 220  Q
    ||||||||||||||||    
T  41018354 tctatgtcacccaagt 41018369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 48000880 - 48000769
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| | ||||||||||| ||||||||||||| ||||  |||||||||||  ||||||| |||||||||||||||||| |||  |||||| ||||     
T  48000880 acacttgggtcacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattg 48000781  T
Q  174 tgattgaccaat 185  Q
    |||||| |||||    
T  48000780 tgattggccaat 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 15027661 - 15027539
Alignment:
Q  98 tgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatc 197  Q
    |||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||  ||||||  ||| ||||||  ||||||||||||| ||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcaccaatgtc 15027562  T
Q  198 actcaattctatgtcacccaagt 220  Q
    |  ||| ||||||| ||||||||    
T  15027561 aaacaactctatgttacccaagt 15027539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 45231907 - 45231991
Alignment:
Q  136 tttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||||||||||||||||||  ||| ||||| ||||| |||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  45231907 tttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 45231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 10419556 - 10419485
Alignment:
Q  119 atcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcac 190  Q
    |||||||||| ||||   ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  10419556 atcacaatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtcac 10419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 48000691 - 48000769
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaa 154  Q
    |||||| |||||| |||||| ||||||||||||| |||| ||||||||||||  |||||| ||||||||||||||||||    
T  48000691 acttgggtgacattgagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 34854836 - 34854771
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  34854836 acttgggtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtg 34854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 4649436 - 4649346
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagaga--gagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||| |||||||||||||||||| || ||| ||||||||||||  ||||||| |||| |||||  |||| ||||||||||||||||||    
T  4649436 ttggtgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtcacc 4649346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 45231991 - 45231932
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatg 135  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  45231991 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatg 45231932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 27028795 - 27028721
Alignment:
Q  150 agaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||| |||| ||||||||||| |||||| |||||||||||||| |||||||| | ||||||||| ||||||||    
T  27028795 agaaacacaagcattgtgacattgtgattgtccaatgtcaccaatgtcactcaactatatgtcaccaaagtgcta 27028721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 29053338 - 29053426
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||| ||||| |||||||||||   ||||| ||||||||||||||||||| |||  |||||| |||| |||||| |||||||||||    
T  29053338 ttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 29053426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 4290542 - 4290593
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  4290542 acttgggtgacatagagttgggtgatattggtgatattggtcaatcacaatg 4290593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 4290623 - 4290690
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||||| |||||||||||||| |||| ||| | ||||||||||||||||||    
T  4290623 caagaattgtgacattgtgattggccaatgtcaccaatgtcacccaactgtatgtcacccaagtgcta 4290690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 7671949 - 7672023
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||  |||||| ||||||||||||||||||| |||  |||||| |||| |||||| |||||||||||    
T  7671949 caatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 7672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 11016952 - 11017014
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||| ||||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  11016952 attgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 11017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 27028732 - 27028790
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||||| |||||| |||||    
T  27028732 tgacatatagttgagtgacattggtgacattggacaatcacaatgtcacaatgcttgtg 27028790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 11016866 - 11016931
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  11016866 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 38975802 - 38975867
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||| | |||||||||||||||||  |||||| |||||    
T  38975802 acttgggtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 22764820 - 22764776
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtg 22764776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22764753 - 22764820
Alignment:
Q  132 aatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcac 199  Q
    |||| ||||||||||||||||||| |||  ||||||||||| |||||| ||||| |||||||| ||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcaccaatgtcac 22764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 42628373 - 42628440
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| |||| |||||| |||||| ||||| |||||||| |||| ||| ||||||||||||||||||||    
T  42628373 caagcattgggacattgtgattggccaatatcaccaatgtcacccaactctatgtcacccaagtgcta 42628440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 27028927 - 27028869
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||| ||| ||||  ||||||| |||||||||||||||||| ||||||||||||    
T  27028927 tgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtg 27028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 41945933 - 41946003
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||| ||||| ||||| |||||||||||| | |||||| |||||||| | ||||||||||||||| |||||    
T  41945933 caagcattgtaacattgtgattgaccaatattaccaatgtcactcaactttatgtcacccaagtgttatcc 41946003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 41945851 - 41945915
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttg 139  Q
    ||||| ||||||||||| ||||||||||||| ||| ||| |||||||| ||||| | ||||||||    
T  41945851 cacttagatgacatagaattgagtgacattgatgacattagtcaatcataatgtcataatgtttg 41945915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 41018369 - 41018318
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||||| ||||||||||||| ||||||||||||| ||||  |||||||||||    
T  41018369 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatg 41018318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 48000754 - 48000691
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||| |||||| |||| ||||||| ||||||||||||| |||| ||| || |||||||||||||    
T  48000754 caagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactcaatgtcacccaagt 48000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 43352904 - 43352871
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgtta 130  Q
    |||| |||||||||||||||||||||||||||||    
T  43352904 gtgatattggtgatattggtcaatcacaatgtta 43352871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 48249589 - 48249556
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtga 109  Q
    |||||||| |||||||||||||||||||||||||    
T  48249589 acttggataacatagagttgagtgacattggtga 48249556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 38975883 - 38975947
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||||| |||||| ||||| ||||||||||||| ||||  || ||||||||||| |||||    
T  38975883 caagcattgtggcattataattgatcaatgtcaccaatgtcacctaactctatgtcacctaagtg 38975947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 6271844 - 6271699
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| |||||||||||||||||| |||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  6271844 cacttgggtgacatagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 6271745  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  6271744 gattggccaatgtcaccaatatcacccaactctatgtcacccaagt 6271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 44380078 - 44379923
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||  || | ||| ||||||||||||||| |||||||    
T  44380078 ggataacatttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtga 44379979  T
Q  169 cattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||| |||| |||||||| ||||| |||||||| ||||||||| ||||||||||    
T  44379978 cattataattggccaatgtcgccaatgtcactcaactctatgtcatccaagtgcta 44379923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 23444275 - 23444408
Alignment:
Q  85 acatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaa 184  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |||||| ||||    
T  23444275 acatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaa 23444374  T
Q  185 tgtcaccaatatcactcaattctatgtcacccaa 218  Q
    |||||||||| |||| ||| ||||||||||||||    
T  23444375 tgtcaccaatgtcacccaactctatgtcacccaa 23444408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 35682300 - 35682159
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||  ||||||||||||| ||||  | |||||||||| |||||| |||||||||| |||||||| |||||||| ||||||| |||||| ||    
T  35682300 tgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggcc 35682201  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||||||||||||||  || ||||||||||||||||||||    
T  35682200 aatgtcaccaatatcacctaactctatgtcacccaagtgcta 35682159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 51265587 - 51265442
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| |||| |||||||| ||||||||||||| ||||  |||||| ||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  51265587 cacttgggtgacttagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 51265488  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  51265487 gattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 51265442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 42375152 - 42375036
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  42375152 cacttgggtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 42375053  T
Q  175 gattgaccaatgtcacc 191  Q
    |||||||||||||||||    
T  42375052 gattgaccaatgtcacc 42375036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 47661981 - 47661860
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| ||||||||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| ||||    
T  47661981 ttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgat 47661882  T
Q  178 tgaccaatgtcaccaatatcac 199  Q
    || |||||||||||||| ||||    
T  47661881 tggccaatgtcaccaatgtcac 47661860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 40789293 - 40789203
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaa 193  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| |||||| |||||||||||||    
T  40789293 ttggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcaccaa 40789203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 47404611 - 47404697
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||    
T  47404611 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcacc 47404697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 26186042 - 26186159
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||  ||| |||| ||||||| ||| |||||| ||||||||| |||| | || |||     
T  26186042 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagaga--aacacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaac 26186139  T
Q  205 tctatgtcacccaagtgcta 224  Q
    ||||||||||||||||||||    
T  26186140 tctatgtcacccaagtgcta 26186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 53954744 - 53954636
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| ||||||||||||| ||||  |||| ||||||| |||||| ||||||||||| ||||||| | || ||||||||||| |||||| ||    
T  53954744 tgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggcc 53954645  T
Q  183 aatgtcacc 191  Q
    |||||||||    
T  53954644 aatgtcacc 53954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 55090023 - 55090107
Alignment:
Q  106 gtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcac 190  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  55090023 gtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcac 55090107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 30861825 - 30861915
Alignment:
Q  130 acaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||| ||||||||||||||||||| |||| |||||| |||| |||||| ||||||||||||||||||  ||| ||||||||||||||||    
T  30861825 acaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaactctatgtcacccaagt 30861915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 47762723 - 47762607
Alignment:
Q  102 attggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactc 201  Q
    |||||||| ||||||||| || ||||| |||||| |||||||||||||||||||  ||  ||||| ||||| ||||||  ||||||||| ||||||||||    
T  47762723 attggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcacaaatatcactc 47762624  T
Q  202 aattctatgtcacccaa 218  Q
    |  ||||||||||||||    
T  47762623 agctctatgtcacccaa 47762607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 6271780 - 6271847
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  6271780 caagcattgtgacattgtgattggccaatgtcaccaatatcactcaactctatgtcacccaagtgcta 6271847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 38714964 - 38714849
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatg 175  Q
    |||||||||||||| || || |||||||||||||||||   ||||| |||||| ||||||||||||||||| | ||||||  || |||| ||||||| ||    
T  38714964 acttggatgacatatagatgggtgacattggtgatattacccaatctcaatgtcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtg 38714865  T
Q  176 attgaccaatgtcacc 191  Q
    |||| ||||| |||||    
T  38714864 attggccaatatcacc 38714849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 25818391 - 25818462
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    ||||||||| ||| |||||||||||||||||| |||||| ||||||||||||||||||| |||  |||||||    
T  25818391 gtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattgtga 25818462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 42375088 - 42375155
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||| ||| ||||||||||||||||||||    
T  42375088 caagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 42375155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 52028661 - 52028575
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||  |||||| ||||| |||||    
T  52028661 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcacc 52028575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 5048884 - 5048947
Alignment:
Q  163 ttgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatc 226  Q
    ||||||||||||||||||||||||||| |||| |||| ||| ||||||||| ||||||| ||||    
T  5048884 ttgtgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatccaagtgttatc 5048947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 5048943 - 5048884
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaa 133  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||    
T  5048943 acacttggatgacatagagttgggtgacattgatgacattggtcaatcataatgtcacaa 5048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 50384131 - 50384194
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||||    
T  50384131 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtga 50384194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 51265523 - 51265590
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||||||||||  ||||||||||||| |||| ||| |||| |||||||||||||||    
T  51265523 caagcattgtgacattatgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 51265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 51265442 - 51265507
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  51265442 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 44379926 - 44379986
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatg 135  Q
    |||||||||||||||||||||||||||||||| || ||||| |||| | ||||| ||||||    
T  44379926 cacttggatgacatagagttgagtgacattggcgacattggccaattataatgtcacaatg 44379986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 3862689 - 3862622
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| | ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  3862689 acacttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 3871446 - 3871379
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| | ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  3871446 acacttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 23444408 - 23444345
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  23444408 ttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 47661920 - 47661987
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| |||||||||||||| |||||    
T  47661920 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaaatgcta 47661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 23444329 - 23444255
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccgaat 231  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| ||||||| |||||| ||||| ||||||    
T  23444329 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgttacccaaatgctacccgaat 23444255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 30710051 - 30709989
Alignment:
Q  66 tagggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgt 128  Q
    ||||| || ||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||||    
T  30710051 taggggtggcacttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 3862619 - 3862688
Alignment:
Q  152 aaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||| |||||| |||| |||||| |||||||||||||| |||| ||| ||||||||||| |||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtg 3862688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 3871376 - 3871445
Alignment:
Q  152 aaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||| |||||| |||| |||||| |||||||||||||| |||| ||| ||||||||||| |||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacctaagtg 3871445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 6271699 - 6271764
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| |||| |||||||| ||||| |||||||||||  |||||| |||||    
T  6271699 acttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtg 6271764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 30709986 - 30710043
Alignment:
Q  165 gtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgc 222  Q
    |||||||| |||||| |||||||||||||| ||||  || ||||||||||||||||||    
T  30709986 gtgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcacccaagtgc 30710043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 44380009 - 44380078
Alignment:
Q  158 aagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||||||| ||||| ||||||  |||| |||||||| |||||||| |||||||||||||| || |||||    
T  44380009 aagtattgtaacattgtgattggtcaatatcaccaatgtcactcaactctatgtcacccaaatgttatcc 44380078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 47762686 - 47762727
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatca 198  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  47762686 caagcattgtgacattatggttgaccaatgtcaccaatatca 47762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 47762607 - 47762667
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgttt 138  Q
    |||| |||||||||| ||||||| ||| |||| ||||  ||||||||||||||||||||||    
T  47762607 ttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgttt 47762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 24006096 - 24006146
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    ||||| ||||| |||||||||||  |||||| |||||||||||||||||||    
T  24006096 ggtgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaac 24006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 26186156 - 26186090
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||| ||||||||||||| || |||||| ||| ||||| |||||||||| | |||||| |||||    
T  26186156 cacttgggtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtg 26186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 28693961 - 28693999
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  28693961 caatcacaatatcacaatgtttgtgaaagagagagaaac 28693999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 19184546 - 19184493
Alignment:
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||||||||||||||| |||| ||||| || ||||| |||||||| ||||||||    
T  19184546 tgattgaccaatgtcatcaatgtcacttaactctatctcacccaaatgctatcc 19184493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 30861915 - 30861850
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| |||||||||||||  ||| |||||||| ||||| |||||||||||  |||||| |||||    
T  30861915 acttgggtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 30861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 31532716 - 31532801
Alignment:
Q  106 gtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||| |||| ||||||||||||| ||||| | ||| |||||||||||||  |||  |||||||| || ||||||  ||||||||||    
T  31532716 gtgacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaatacaaacattgtgacgttgtgattggtcaatgtcacc 31532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 35682162 - 35682215
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgt 128  Q
    ||||||| ||||||||||||  |||| |||||||| ||||| ||||||||||||    
T  35682162 cacttgggtgacatagagttaggtgatattggtgacattggccaatcacaatgt 35682215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 45591446 - 45591499
Alignment:
Q  115 gtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    |||||||| ||||| |||||| ||||||||||||||||||| |||  |||||||    
T  45591446 gtcaatcataatgtcacaatgcttgtgaaagagagagaaacacaaacattgtga 45591499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 50041892 - 50041952
Alignment:
Q  65 atagggatgacacttggatgacata-gagttgagtgacattggtgatattggtcaatcacaa 125  Q
    |||||||| ||||||| |||||||| ||||||| |||||||||||| |||| ||||||||||    
T  50041892 atagggataacacttgcatgacataagagttga-tgacattggtgacattgatcaatcacaa 50041952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 50049114 - 50049174
Alignment:
Q  65 atagggatgacacttggatgacata-gagttgagtgacattggtgatattggtcaatcacaa 125  Q
    |||||||| ||||||| |||||||| ||||||| |||||||||||| |||| ||||||||||    
T  50049114 atagggataacacttgcatgacataagagttga-tgacattggtgacattgatcaatcacaa 50049174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 55090001 - 55090033
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggt 107  Q
    ||||||| |||||||||||||||||||||||||    
T  55090001 cacttgggtgacatagagttgagtgacattggt 55090033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 55090129 - 55090097
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggt 107  Q
    ||||||| |||||||||||||||||||||||||    
T  55090129 cacttgggtgacatagagttgagtgacattggt 55090097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 50524845 - 50524706
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||  ||||||||||||    
T  50524845 acacttgggtgacatagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacatta 50524746  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtca 213  Q
    ||||||  |||||||| || |||||||||| |||||||||    
T  50524745 tgattggtcaatgtcatcattatcactcaactctatgtca 50524706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 41753107 - 41752961
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||  |||||| |||||||||||| |||||| |||  |||||| ||||     
T  41753107 acacttgggtgacatagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattg 41753008  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  41753007 tgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 41752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 51046072 - 51046214
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    ||||||||||||||||||  ||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| ||| || |||| ||||    
T  51046072 ttggatgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgat 51046171  T
Q  178 tgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    || |||||||||||||| |||  ||| ||||||||||||||||    
T  51046172 tggccaatgtcaccaatgtcatccaactctatgtcacccaagt 51046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 30580751 - 30580890
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||  ||||||||| ||| ||||||||||||||||||  |||||| ||||| ||||| ||||||||||||| |||||| |||| | |||||||||     
T  30580751 acacttgagtgacatagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattg 30580850  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtca 213  Q
    ||||||||||||||||| ||| |||| |||||||||||||    
T  30580851 tgattgaccaatgtcacaaatgtcacccaattctatgtca 30580890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 30734406 - 30734547
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||  ||||||||| ||| ||||  | |||||||||| |||||| |||||||||| |||||||| |||||||| ||||||| |||||| ||    
T  30734406 tgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggcc 30734505  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||||||||| ||||  || ||||||||||||||||||||    
T  30734506 aatgtcaccaatgtcacctaactctatgtcacccaagtgcta 30734547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 33689288 - 33689166
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||| ||| |||| |||| |||     
T  33689288 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaac 33689189  T
Q  205 tctatgtcacccaagtgctatcc 227  Q
    |||||||||| |||||| |||||    
T  33689188 tctatgtcacacaagtgttatcc 33689166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 1801441 - 1801558
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| ||||||||||||||||||| |||  |||||| ||||     
T  1801441 acacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattg 1801540  T
Q  174 tgattgaccaatgtcacc 191  Q
    |||||| |||||||||||    
T  1801541 tgattggccaatgtcacc 1801558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 47492065 - 47492186
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatat 196  Q
    ||||||||||||| ||||| |||||||||||| |||||| |||||||| |||||||||| |||| ||||||||||| |||||| ||||| | |||||| |    
T  47492065 gtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgaccaatgt 47492164  T
Q  197 cactcaattctatgtcacccaa 218  Q
    ||| ||| ||||||||||||||    
T  47492165 cacccaactctatgtcacccaa 47492186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 55223343 - 55223222
Alignment:
Q  106 gtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaatt 205  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||||  ||||||| | | ||| |||||||||||| |||||||| ||||  || |    
T  55223343 gtgatattggtcaatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacctaact 55223244  T
Q  206 ctatgtcacccaagtgctatcc 227  Q
    ||||||||| ||||||||||||    
T  55223243 ctatgtcacacaagtgctatcc 55223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 18321757 - 18321641
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatg 210  Q
    |||||||||||||||||| ||||||  ||||||| ||||| |||| |||   |||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  18321757 attggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcaccaatatcacccaactctatg 18321658  T
Q  211 tcacccaagtgctatcc 227  Q
    |  ||||||||||||||    
T  18321657 ttgcccaagtgctatcc 18321641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 30476500 - 30476585
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcac 190  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcac 30476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 43139735 - 43139848
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| || ||||||||||||||| | |||| ||||||||||||||||||| |||| |||||| |||| | |||| |||||||||||||| |||| |||     
T  43139735 ggtgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaac 43139834  T
Q  205 tctatgtcacccaa 218  Q
    ||||||||||||||    
T  43139835 tctatgtcacccaa 43139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 45103105 - 45103180
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagaga 150  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  45103105 cacttgggtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 29031740 - 29031826
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| | |||||||||| |||||    
T  29031740 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacc 29031826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 49418717 - 49418803
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||| |||| ||| ||| ||||| ||||||||||||||||    
T  49418717 ggtgatattggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcattatgatattataattgaccaatgtcacc 49418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 33689163 - 33689238
Alignment:
Q  66 tagggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||| |||||||  ||||||||||||| ||||||||| |||||||||||||||||||||| |||||| |||||    
T  33689163 tagggataacacttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtg 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 50550087 - 50549993
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcac 199  Q
    ||||| |||| ||||||| ||||| | |||||||||||||||||||||||| |||| ||||| | ||| ||||||  ||||||||||||||||||    
T  50550087 ggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcaccaatatcac 50549993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 47677295 - 47677367
Alignment:
Q  119 atcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||    
T  47677295 atcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcacc 47677367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 41752961 - 41753106
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatg 175  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||||             | |||| |||||| |||| ||    
T  41752961 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtg 41753060  T
Q  176 attgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||    
T  41753061 attggccaatgtcaccaatgtcactcaactctatgtcacccaagtg 41753106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 21024154 - 21024088
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| || |||||||||||||||||||||| |||||| |||||||||||| |||||    
T  21024154 caagaattgtgacattgtgtttgaccaatgtcaccaatatca-tcaattttatgtcacccaaatgcta 21024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 45103169 - 45103102
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  45103169 caagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctatgtcacccaagtgcta 45103102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 47492186 - 47492123
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| ||||||||||||| ||||||||||| ||||||| |||||||||||| |||||| |||||    
T  47492186 ttgggtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtg 47492123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 51046128 - 51046066
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||||||||||| |||||||||||||||||  ||| ||||||||| |||| |||||    
T  51046128 attgtgacattatgattgatcaatgtcaccaatatcatccaactctatgtcatccaaatgcta 51046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1801506 - 1801442
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||||| |||| |||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  1801506 caagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtg 1801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 18321657 - 18321713
Alignment:
Q  85 acatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||| |||| |||||||| |||||||||||||||||| |||| |||||||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtg 18321713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 30580812 - 30580752
Alignment:
Q  161 tattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||||||||||||||||||  |||| |||||||| |||| |||||||||||||| ||||||    
T  30580812 tattgtgacattatgattggtcaatatcaccaatgtcacccaattctatgtcactcaagtg 30580752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 55223236 - 55223279
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaat 126  Q
    ||||||||||||  ||||||||||||||||||||||||||||||    
T  55223236 tgacatagagttaggtgacattggtgatattggtcaatcacaat 55223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 50524791 - 50524849
Alignment:
Q  168 acattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatc 226  Q
    ||||| |||||||| ||| |||||||| |||||||| ||||||||||||||||| ||||    
T  50524791 acattgtgattgactaatatcaccaatgtcactcaactctatgtcacccaagtgttatc 50524849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 30580893 - 30580832
Alignment:
Q  80 ggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||||||||| ||| |||||||| |||| |||||||||||||||||| ||| || |||||    
T  30580893 ggatgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtg 30580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 30734544 - 30734491
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgt 128  Q
    ||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||||    
T  30734544 cacttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30734491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 35538997 - 35538962
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtga 109  Q
    |||||||||||||||||||||| |||||||||||||    
T  35538997 acacttggatgacatagagttgggtgacattggtga 35538962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 39385745 - 39385800
Alignment:
Q  136 tttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||| |||||||||||    
T  39385745 tttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtcacc 39385800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 43139848 - 43139785
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| ||||||||||||| ||||||||||||| ||||| |||| ||||||  |||||| |||||    
T  43139848 ttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtg 43139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 50524697 - 50524764
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||| ||||||||||||||||||||| | || ||| ||||  |||||| ||||| ||||||||||||    
T  50524697 acactgggatgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtg 50524764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 51046214 - 51046163
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||||| |||||||||||||  |||||||||||| ||||| |||||||||||    
T  51046214 acttgggtgacatagagttggatgacattggtgacattggccaatcacaatg 51046163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 55223333 - 55223372
Alignment:
Q  189 accaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  55223333 accaatatcacttaactctatgtcacccaagtgctatccg 55223372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 21024117 - 21024165
Alignment:
Q  102 attggtgatattggtcaatcacaatgttacaatgtttgtgaaagagaga 150  Q
    |||||||| ||||||||| |||||||| |||||  ||||||||||||||    
T  21024117 attggtgacattggtcaaacacaatgtcacaattcttgtgaaagagaga 21024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 29031826 - 29031790
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  29031826 ggtgatattggtcaattacaatgtcacaatgtttgtg 29031790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 30904345 - 30904289
Alignment:
Q  116 tcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatt 172  Q
    ||||||||||| | ||||| ||| | |||||||||||||| |||| |||||||||||    
T  30904345 tcaatcacaatatcacaatatttataaaagagagagaaacacaagcattgtgacatt 30904289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 34060203 - 34060243
Alignment:
Q  89 agagttgagtgacattggtgatattggtcaatcacaatgtt 129  Q
    |||||||  ||||||||||||||||||||||||| ||||||    
T  34060203 agagttggatgacattggtgatattggtcaatcataatgtt 34060243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 12913937 - 12913796
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||||| || |||| ||||||||||| |||||| ||    
T  12913937 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggcc 12913838  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||||||||| |||||||| | |||||||| |||||||||    
T  12913837 aatgtcaccaatgtcactcaactatatgtcacacaagtgcta 12913796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 19655301 - 19655155
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| ||||||||||||||||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||  |||||| ||||     
T  19655301 acacttgggtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattg 19655202  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  19655201 tgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 19655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 291239 - 291094
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||| ||||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||  |||| |||||| |||| |    
T  291239 cacttgggtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgt 291140  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| |||||||||| |||||    
T  291139 gattggccaatgtcaccaatgtcacccaactctatgtcactcaagt 291094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 28819056 - 28818943
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||||||||||||||||||  |||||||||||||||| ||||    
T  28819056 ttgggtgacatagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgat 28818957  T
Q  178 tgaccaatgtcacc 191  Q
    ||||||||||||||    
T  28818956 tgaccaatgtcacc 28818943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 16439250 - 16439128
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||| ||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| || |||     
T  16439250 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaac 16439151  T
Q  205 tctatgtcacccaagtgctatcc 227  Q
    ||||| ||| |||||||||||||    
T  16439150 tctatatcatccaagtgctatcc 16439128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 29699509 - 29699385
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| |||| |||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  29699509 cacttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 29699410  T
Q  175 gattgaccaatgtcaccaatatcac 199  Q
    ||||| |||||||||||||| ||||    
T  29699409 gattggccaatgtcaccaatgtcac 29699385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 30117827 - 30117967
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| ||| ||||||||| ||||||||||||||||||  |||||||||||| ||||||||| ||||| |||||||||| |||| |||||| |||||||||    
T  30117827 ttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgat 30117926  T
Q  178 tgaccaatgtcaccaatatcactcaattctatgtcacccaa 218  Q
    |||||||| |||||||| |||  ||| ||||||||| ||||    
T  30117927 tgaccaatatcaccaatgtcatccaactctatgtcatccaa 30117967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 16971286 - 16971170
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  16971286 cacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 16971187  T
Q  175 gattgaccaatgtcacc 191  Q
    ||||| |||||||||||    
T  16971186 gattggccaatgtcacc 16971170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 3899981 - 3899865
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| |||| |||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  3899981 cacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 3899882  T
Q  175 gattgaccaatgtcacc 191  Q
    ||||| |||||||||||    
T  3899881 gattggccaatgtcacc 3899865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 3180086 - 3180208
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||| | || |||     
T  3180086 ggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcaccaatgttac-caac 3180184  T
Q  205 tctatgtcacccaagtgctatccg 228  Q
    ||||||| || |||||||||||||    
T  3180185 tctatgtgacacaagtgctatccg 3180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 2953332 - 2953239
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||||    
T  2953332 cacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtga 2953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 28818995 - 28819056
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaa 218  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28818995 caagcattgtgacattatgattgaccaatgtcaccaatatcactcaactctatgtcacccaa 28819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 11983310 - 11983249
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11983310 attgtgacattttgattgaccaatgtcaccaatatcac-caattctatgtcacccaagtgcta 11983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 2093933 - 2094018
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaag 160  Q
    ||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||| | |||| ||||||||||||||||||| ||||    
T  2093933 cacttgggtgacatagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaag 2094018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 19598417 - 19598329
Alignment:
Q  132 aatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||| ||||||||||||||||||| |||| ||||||  ||| ||||||||||||||||||||| | || ||| ||||||||||||||||    
T  19598417 aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcacccaagt 19598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 29699445 - 29699512
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  29699445 caagcattgtgacattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagtgcta 29699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 26662549 - 26662425
Alignment:
Q  68 gggatgacacttggatgacatagagttgagtgacattggtgatattggtcaa-tcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgt 166  Q
    ||||| |||||||  |||| |||||||| |||| |||||||| ||||||||| ||||||||| |||||  |||||||| |||||||||| |||| | |||    
T  26662549 gggataacacttgtgtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgt 26662450  T
Q  167 gacattatgattgaccaatgtcacc 191  Q
     ||||| ||||||  ||||||||||    
T  26662449 aacattgtgattggtcaatgtcacc 26662425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 26934144 - 26934020
Alignment:
Q  68 gggatgacacttggatgacatagagttgagtgacattggtgatattggtcaa-tcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgt 166  Q
    ||||| |||||||  |||| |||||||| |||| |||||||| ||||||||| ||||||||| |||||  |||||||| |||||||||| |||| | |||    
T  26934144 gggataacacttgtgtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgt 26934045  T
Q  167 gacattatgattgaccaatgtcacc 191  Q
     ||||| ||||||  ||||||||||    
T  26934044 aacattgtgattggtcaatgtcacc 26934020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 2093997 - 2093930
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||| ||||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  2093997 caagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctatgtcacccaagtgcta 2093930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 2953268 - 2953335
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||||| |||||||||||||| |||| ||| ||||||||||||||||||||    
T  2953268 caagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 2953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 19655155 - 19655300
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatg 175  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||||             | |||| ||||||||||| ||    
T  19655155 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtg 19655254  T
Q  176 attgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    ||||  ||||||||||||| |||||||| |||||||||||||||||    
T  19655255 attggacaatgtcaccaatgtcactcaactctatgtcacccaagtg 19655300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 16971222 - 16971294
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccga 229  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| |||||||||||||||||||| ||||    
T  16971222 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgctacccga 16971294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 26662477 - 26662548
Alignment:
Q  157 caagtattgtgacattatgatt-gaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| ||||| |||||| |||||    
T  26662477 caagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtgttatcc 26662548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 26934072 - 26934143
Alignment:
Q  157 caagtattgtgacattatgatt-gaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| ||||| |||||| |||||    
T  26934072 caagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaactctaagtcacacaagtgttatcc 26934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 30117967 - 30117904
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||  |||||| |||||    
T  30117967 ttggatgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtg 30117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 38134404 - 38134479
Alignment:
Q  110 tattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaat 185  Q
    |||||| |||||||||||| |||||| | |||||||||| |||||| |||| ||||||||||| |||||| |||||    
T  38134404 tattggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaat 38134479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 291180 - 291242
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||| ||||||| ||||||||||||| |||| ||| ||||| ||||||||||||||    
T  291180 attgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatatcacccaagtgcta 291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 16439134 - 16439200
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||| ||||||||| || | |||||||| |||||||||||||||||| |||||| |||||    
T  16439134 cacttggatgatatagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtg 16439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 16802544 - 16802470
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||| ||||| |||||| |||| |||||||||||||| ||| |||||| ||||| |||||| |||||||||||    
T  16802544 caatcagaatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcacc 16802470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 19272265 - 19272337
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagaga 150  Q
    ||||||||||||||||||||||| |||||||| ||||  ||||||||||   | ||| |||||||||||||||    
T  19272265 ttggatgacatagagttgagtgatattggtgaaattgaccaatcacaattacataatatttgtgaaagagaga 19272337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 228498 - 228399
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    |||| ||| |||||||||||| ||||| || | |||| ||| ||| |||||||||||||| | |||| |||| ||||||||| |||| ||| ||||||||    
T  228498 ggataacatttggatgacataaagttgggtaatattgatgagatttgtcaatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaaatattgtga 228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 3899917 - 3899984
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| |||| |||||||||||||||    
T  3899917 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 3899984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 12913807 - 12913858
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaat 134  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||||| |||||    
T  12913807 tgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaat 12913858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 1638465 - 1638519
Alignment:
Q  87 atagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||| |||| ||| |||||||||| |||||||||||| ||||||||||||    
T  1638465 atagagttgggtgatatttgtgatattggccaatcacaatgtcacaatgtttgtg 1638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 7009447 - 7009401
Alignment:
Q  98 tgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaa 144  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||    
T  7009447 tgacattggtgatattggtcaatcacaatatcacaatgcttgtgaaa 7009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 19598329 - 19598379
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaat 126  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||||||||    
T  19598329 acttgggtgacatagagttgggtaacattggtgacattggtcaatcacaat 19598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 291101 - 291158
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgt 140  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| ||||    
T  291101 tgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgt 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 1638512 - 1638447
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||||||||| |||||| ||||| |||| |||||||| ||| ||||| ||||| |||||||||||    
T  1638512 attgtgacattgtgattggccaatatcacaaatatcacccaactctatatcacctaagtgctatcc 1638447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 11983252 - 11983328
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagaga 152  Q
    ||||||| ||||||||| ||| |||| |||||||| |||||||||||| ||||| ||||| |||| || |||||||||    
T  11983252 cacttgggtgacatagaattg-gtgatattggtgacattggtcaatcaaaatgtcacaatctttgagagagagagaga 11983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 2356405 - 2356339
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagaga 150  Q
    |||||||||||||  |||||||||||| ||||| ||||||| |||| |||||| || |||||||||||    
T  2356405 tgacatagagttggatgacattggtgacattggccaatcac-atgtcacaatgcttatgaaagagaga 2356339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 14167212 - 14167146
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||||   ||| ||||||||||||| |||||||||| ||||||||||||||    
T  14167212 caaggattgtgacattgtgattcgtcaaagtcaccaatatca-tcaattctatatcacccaagtgcta 14167146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 13312319 - 13312257
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||| ||||||| |||||||| |||| ||||  || ||||||||||| ||||||||    
T  13312319 attgtgacattgtgattgatcaatgtcatcaatgtcacctaactctatgtcacctaagtgcta 13312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 31147141 - 31147183
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaa 125  Q
    ||||||||||||||||||||||| | ||||||| |||||||||    
T  31147141 tgacatagagttgagtgacattgataatattggccaatcacaa 31147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 32485697 - 32485631
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatg 135  Q
    |||| |||||||  ||||| ||||||| ||||||||||||| |||| ||||||||||| | ||||||    
T  32485697 ggataacacttgtgtgacacagagttgggtgacattggtgacattgatcaatcacaatatcacaatg 32485631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 12913881 - 12913938
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcac 214  Q
    |||| ||| ||||||| |||||||||||| |||||||| |||| ||| ||||||||||    
T  12913881 caagcattatgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcac 12913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 32485632 - 32485697
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||||| ||| ||||||| ||||||||||||| |||| ||| ||| |||||| |||||| |||||    
T  32485632 attgtgatattgtgattgatcaatgtcaccaatgtcacccaactctgtgtcacacaagtgttatcc 32485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 3180191 - 3180136
Alignment:
Q  85 acatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||| || |||||||||| |||||||||||||||||  |||||| |||||    
T  3180191 acatagagttg-gtaacattggtgacattggtcaatcacaatgccacaatgcttgtg 3180136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 13312268 - 13312320
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatg 135  Q
    ||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||    
T  13312268 tgacatagagttaggtgacattgatgacattgatcaatcacaatgtcacaatg 13312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 37219756 - 37219700
Alignment:
Q  164 tgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||||| | || |||||||||||||||||||||||  ||| |||||||||| ||||    
T  37219756 tgtgacactgtggttgaccaatgtcaccaatatcaccaaatactatgtcacctaagt 37219700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 39031290 - 39031242
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaat 126  Q
    |||||||||||||||| | ||||||||||||| | || |||||||||||    
T  39031290 ttggatgacatagagtggggtgacattggtgacactgatcaatcacaat 39031242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 7051 - 7197
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| |||||| ||    
T  7051 tgacatagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggcc 7150  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatccgaa 230  Q
    |||||||||||| |||| ||| |||||||||| |||||| ||||||||    
T  7151 aatgtcaccaatgtcac-caactctatgtcacacaagtgttatccgaa 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 7194 - 7123
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| |||||||  ||||||||||||| ||||||||||||| ||||| |||||||||||| |||||| |||||    
T  7194 ggataacacttgtgtgacatagagttg-gtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 10086893 - 10086754
Alignment:
Q  81 gatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattga 180  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||| |||  ||| ||||||| |||||||    
T  10086893 gatgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattga 10086794  T
Q  181 ccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||||||| ||| |||| ||||||||||||||||||||    
T  10086793 ccaatgtcactaatgtcacccaattctatgtcacccaagt 10086754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 234
Target Start/End: Complemental strand, 5667238 - 5667080
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatg 175  Q
    |||||| ||||||||||||   |||||||||||| ||||| |||| ||||||| | |||| ||||||||||||||||||  |||| ||||||||||| ||    
T  5667238 acttgggtgacatagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtg 5667139  T
Q  176 attgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccgaataat 234  Q
    ||||||||||||||||||| |||  ||| |||||||||||||||||||| |||||||||    
T  5667138 attgaccaatgtcaccaatgtcatccaactctatgtcacccaagtgctacccgaataat 5667080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 5033303 - 5033158
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  5033303 cacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 5033204  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||  ||||||||||||| |||| ||| ||||||||||||||||    
T  5033203 gattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 5033158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 35440965 - 35441110
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| |||| |||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  35440965 cacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 35441064  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  35441065 gattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 35441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 33841587 - 33841732
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| ||||  |||||||| ||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  33841587 cacttgggtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattct 33841686  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||  ||||||||||||| |||| ||| ||||||||||||||||    
T  33841687 gattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 33841732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 8796556 - 8796411
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    |||||||||| |  |||| |||||||| ||||  |||||| ||||| |||||| |||||||||| |||||||| |||| ||||||||||| |||||||||    
T  8796556 tgacatagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgacc 8796457  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    ||| |||| ||||||||  || ||||||||||||||||| ||||||    
T  8796456 aatatcacaaatatcacctaactctatgtcacccaagtgttatccg 8796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 43844470 - 43844620
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||| ||||| |  ||| ||||||  ||||||||||| |||| ||||||||||| ||||    
T  43844470 ttggatgacatagagttgggtgatattgatgatattggttaatcataatgtcaggatgcttgtga--gagagagaaacacaagcattgtgacattgtgat 43844567  T
Q  178 tgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccgaa 230  Q
    ||| |||| |||||||| |||  ||| |||||||||||||| |||||||||||    
T  43844568 tgatcaatatcaccaatgtcatccaactctatgtcacccaattgctatccgaa 43844620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 39851097 - 39850981
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||||||||||| ||||||||||||||||||| ||||  |||||||||| ||| |||| ||||||||||||||||||| |||  |||||| |||| |    
T  39851097 cacttggatgacataaagttgagtgacattggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgt 39850998  T
Q  175 gattgaccaatgtcacc 191  Q
    ||||| |||||||||||    
T  39850997 gattggccaatgtcacc 39850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 8243415 - 8243529
Alignment:
Q  106 gtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaatt 205  Q
    |||| |||| ||||||||||||  |||||| ||||||||||||||||||| |||| |||||| |||| ||||||||||| ||||||||| |||| ||| |    
T  8243415 gtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaact 8243514  T
Q  206 ctatgtcacccaagt 220  Q
    |||||||||||||||    
T  8243515 ctatgtcacccaagt 8243529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 34229753 - 34229631
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||||||| |||| ||| ||||||| ||||||||  ||||||| ||| |||| |||     
T  34229753 ggtgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattgactcatgtcactaatgtcacccaac 34229654  T
Q  205 tctatgtcacccaagtgctatcc 227  Q
    |||||||||| ||||||||||||    
T  34229653 tctatgtcacacaagtgctatcc 34229631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 45191122 - 45191268
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| |||||||||||||  ||| |||||||| |||| | ||||||||||  |||||| || |||||||||||||||| |||  ||||| |||||     
T  45191122 acacttgggtgacatagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattt 45191221  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||||  |||||||||||||||||  ||| ||||||||||||||||    
T  45191222 tgattggtcaatgtcaccaatatcatccaactctatgtcacccaagt 45191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 4958732 - 4958590
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||   ||| ||| |||| ||||  ||||||||| || |||||  ||||||||||||||||||| |||  ||| ||||||| |||||| ||    
T  4958732 tgacatagagttagatgatattagtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggcc 4958634  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||||| |||||||||  ||||||||||||| ||||||||||||    
T  4958633 aatgtcatcaatatcac-aaattctatgtcacacaagtgctatcc 4958590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 2581895 - 2581822
Alignment:
Q  147 gagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||||||| |||| |||||| |||| |||||| ||||||||| |||| |||| ||||||||||||||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtcaacaatgtcacccaattctatgtcacccaagt 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 5667093 - 5667158
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgt 140  Q
    ||||||| |||||||||||||  |||||||||||| |||||||||||||||||| |||||| ||||    
T  5667093 cacttgggtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 6296744 - 6296631
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| ||| |||||||||  ||||||| |||| ||| |||||| | ||||| |||||  ||||||||||||||||||| |||| ||| ||||||| ||||    
T  6296744 ttgggtgatatagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgat 6296645  T
Q  178 tgaccaatgtcacc 191  Q
    ||  ||||||||||    
T  6296644 tggtcaatgtcacc 6296631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 8796412 - 8796484
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| |||||||| ||||||||||||  |||| ||| ||||||||||||||||||||||| |||||| |||||    
T  8796412 ggataacacttgggtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtg 8796484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 5033239 - 5033306
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  5033239 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 5033306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 35031639 - 35031760
Alignment:
Q  104 tggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagta--ttgtgacattatgattgaccaatgtcaccaatatcactc 201  Q
    |||||| |||| |||||||||||||  ||||| ||||||||||||||||||   ||||   || ||| ||| || ||||||||| |||| ||||||||||    
T  35031639 tggtgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaaaa-aagtcacttatgatattgtggttgaccaatatcacaaatatcactc 35031737  T
Q  202 aattctatgtcacccaagtgcta 224  Q
    || ||||||||||| ||||||||    
T  35031738 aactctatgtcacctaagtgcta 35031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 43844608 - 43844545
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||| |||||||||||||  ||||||||||||||||| ||||||||||||| |||||| |||||    
T  43844608 ttgggtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtg 43844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 8243529 - 8243464
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||||||  |||||| |||||    
T  8243529 acttgggtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtg 8243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 10086754 - 10086819
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||| ||| |||||||| |||| |||||||||||||||||| | ||||||||||    
T  10086754 acttgggtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtg 10086819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 22649842 - 22649907
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||||||||||||||||| |||||  ||||||||||  |||||| |||||    
T  22649842 acttgggtgacatagagttgagtgacattggtgacattggctaatcacaatgccacaatgcttgtg 22649907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 35441110 - 35441045
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  35441110 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 22649905 - 22649842
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||| |||||| |||| |||||  |||||||||||||| |||||||| ||||||||||||||||    
T  22649905 caagcattgtggcattgtgattagccaatgtcaccaatgtcactcaactctatgtcacccaagt 22649842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 33841651 - 33841584
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||| | ||||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  33841651 caagcattgtgacaatgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 33841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 35441029 - 35440962
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| |||| |||||||||||||||    
T  35441029 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcacccaagtgcta 35440962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 5033158 - 5033223
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||  |||||||||||  |||||| |||||    
T  5033158 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 45191268 - 45191203
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| |||||||||||||  ||| |||||||| ||||  |||||| ||||||||||||||||||    
T  45191268 acttgggtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtg 45191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 13470093 - 13470042
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaa 154  Q
    ||||||| ||||||||||||||||||||||||  || | |||||||||||||    
T  13470093 ttggtgacattggtcaatcacaatgttacaatacttataaaagagagagaaa 13470042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 31159971 - 31159900
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtga 168  Q
    |||| |||||||| ||| | |||||| ||||| |||||| |||||||||||||||||||  || ||||||||    
T  31159971 gtgatattggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaacaaaaatattgtga 31159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 34541829 - 34541896
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatt 172  Q
    ||||| ||||| |||||| ||| | |||||| ||||||||||||||||||| |||| |||||| ||||    
T  34541829 ggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattgtggcatt 34541896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 35031749 - 35031706
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaat 126  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||    
T  35031749 tgacatagagttgagtgatatttgtgatattggtcaaccacaat 35031706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 45191182 - 45191123
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||||| |||| ||||| | |||||||||||||||||  ||| |||||||||||||||||    
T  45191182 attgtggcattgtgattaatcaatgtcaccaatatcatccaactctatgtcacccaagtg 45191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 1880289 - 1880232
Alignment:
Q  166 tgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||| ||||||  ||||||||||| | |||| ||||||||||||||||||||||||    
T  1880289 tgacattgtgattggtcaatgtcaccagtgtcac-caattctatgtcacccaagtgcta 1880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 6296683 - 6296753
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||||||||||||||||| |||||| |||||||| ||| |||  ||| ||||| |||||||| | ||||||    
T  6296683 caagtattgtgacattataattgactaatgtcactaatgtcatccaactctatatcacccaaatactatcc 6296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 31159929 - 31159971
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcac 199  Q
    |||| |||||||||||||||||| | |||||||||||||||||    
T  31159929 caagcattgtgacattatgattggcgaatgtcaccaatatcac 31159971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 39851058 - 39851104
Alignment:
Q  182 caatgtcaccaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||||    
T  39851058 caatgtcaccaatgtcactcaactttatgtcatccaagtgctatccg 39851104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 2581822 - 2581887
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||| ||| ||||||||| ||| ||||| |||||||||||  |||||| |||||    
T  2581822 acttgggtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtg 2581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 33841732 - 33841667
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||  |||||| ||||  |||||| |||||    
T  33841732 acttgggtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtg 33841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 8796500 - 8796568
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctat 225  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||  |  |||||||||| || |||||||    
T  8796500 caagcattgtgacattttgattggtcaatgtcaccaatatcacctagctctatgtcacacatgtgctat 8796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 39139839 - 39139875
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaa 193  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  39139839 caaggattgtgacattgtgattgaccaatgtcaccaa 39139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 43844522 - 43844470
Alignment:
Q  166 tgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaa 218  Q
    ||||||||||||| |||||| ||| ||||||||| ||| ||||||||| ||||    
T  43844522 tgacattatgattaaccaatatcatcaatatcacccaactctatgtcatccaa 43844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 29179593 - 29179738
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||||||||||||||||| ||||||||||||| | ||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  29179593 cacttggatgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 29179692  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  29179693 gattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 29179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 48993913 - 48994058
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  48993913 cacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 48994012  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||  ||||||||||||| |||| ||| ||||||||||||||||    
T  48994013 gattggtcaatgtcaccaatgtcacccaactctatgtcacccaagt 48994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 86 - 224
Target Start/End: Original strand, 32540755 - 32540893
Alignment:
Q  86 catagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaat 185  Q
    |||||||||| ||||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||||| |||| ||||| ||||| ||||||  ||||    
T  32540755 catagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaat 32540854  T
Q  186 gtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||| |||  ||||||||||||||||||||||||    
T  32540855 gtcaccaatgtcatccaattctatgtcacccaagtgcta 32540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 15220950 - 15220837
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||| |||| ||||||| ||  ||||    
T  15220950 ttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtgat 15220851  T
Q  178 tgaccaatgtcacc 191  Q
    ||||||||||||||    
T  15220850 tgaccaatgtcacc 15220837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 5995512 - 5995366
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatta 173  Q
    |||||||| |||||||||||||  |||||||||||| ||||  |||||||||||  |||||| ||||||||||||||||||| |||| |||||| ||||     
T  5995512 acacttgggtgacatagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattg 5995413  T
Q  174 tgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||| ||||||| |||||| |||   || ||||||||||||||||    
T  5995412 tgattggccaatgttaccaatgtcatcaaactctatgtcacccaagt 5995366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 37155158 - 37155043
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| ||||| |||||||||||| |||||  ||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| ||||  ||     
T  37155158 ggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaac 37155059  T
Q  205 tctatgtcacccaagt 220  Q
    ||||||||||||||||    
T  37155058 tctatgtcacccaagt 37155043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 48498529 - 48498412
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactca 202  Q
    ||||||| ||||  ||||||||||||||| ||| ||||||||||||||||||| |||  ||||||  ||||||||||||||||||||| ||| |||| ||    
T  48498529 ttggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcaccca 48498430  T
Q  203 attctatgtcacccaagt 220  Q
    | ||||||||||||||||    
T  48498429 actctatgtcacccaagt 48498412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 48604973 - 48605058
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcac 190  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  48604973 ggtgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcac 48605058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 49444909 - 49445023
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||||||| || | |||||||||||||||||||| |||||  |||||||||||| |||| |||||| |||| |    
T  49444909 cacttgggtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg--agagagagaaacacaagcattgtggcattgt 49445006  T
Q  175 gattgaccaatgtcacc 191  Q
    ||||| |||||||||||    
T  49445007 gattggccaatgtcacc 49445023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 1091582 - 1091686
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcaccc 216  Q
    |||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| ||||||  ||| |||||||||||||| ||| ||||||||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcaccaatatcacccaactctatgtcaccc 1091681  T
Q  217 aagtg 221  Q
    |||||    
T  1091682 aagtg 1091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 17127572 - 17127712
Alignment:
Q  87 atagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatg 186  Q
    ||||||||  |||||||| |||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| ||||||  |||||    
T  17127572 atagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatg 17127671  T
Q  187 tcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||| ||| ||||  || ||||| ||||||||||| |||||    
T  17127672 tcactaatgtcacctaactctatatcacccaagtgttatcc 17127712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 29371502 - 29371394
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    |||||||||| |  ||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| |||||| ||    
T  29371502 tgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggcc 29371403  T
Q  183 aatgtcacc 191  Q
    |||||||||    
T  29371402 aatgtcacc 29371394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 33219720 - 33219601
Alignment:
Q  70 gatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgac 169  Q
    |||| ||||||| | |||||||||||  |||||||||||| |||| ||||||||||||| | |||| |||||||||||||| |||| |||| ||||| ||    
T  33219720 gatggcacttgggtaacatagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaac 33219621  T
Q  170 attatgattgaccaatgtca 189  Q
    ||| ||||||| ||||||||    
T  33219620 attgtgattgatcaatgtca 33219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 4609108 - 4608986
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||  ||||||||||| |||| |  |||||||||| || |||| |||     
T  4609108 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacccaac 4609009  T
Q  205 tctatgtcacccaagtgctatcc 227  Q
    || || |||| ||||||||||||    
T  4609008 tccatatcacacaagtgctatcc 4608986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 36290458 - 36290556
Alignment:
Q  130 acaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    |||||| ||||||||||||||||||| ||| |||||||||||| ||||||  ||||| ||||||| |||| ||| |||||||||||||||| |||||||    
T  36290458 acaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccaccaatgtcacccaactctatgtcacccaagtactatccg 36290556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 5694914 - 5695001
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||    
T  5694914 ttggtgacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcacc 5695001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 8337875 - 8337963
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||  |||||| |||| ||||||  ||||||||||    
T  8337875 ttggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtcacc 8337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 45728393 - 45728277
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatg 210  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| |||| ||||||| ||| ||||||  |||| ||||||||||||| ||| ||||||    
T  45728393 attggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctatg 45728294  T
Q  211 tcacccaagtgctatcc 227  Q
     | || ||||| |||||    
T  45728293 actccaaagtgttatcc 45728277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 9157416 - 9157297
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatg 210  Q
    |||| ||||||||||| | |||||| ||| ||||||||||||||| |||| ||||||||||| ||||||  |||||| |||||| |||| ||| ||||||    
T  9157416 attgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctatg 9157317  T
Q  211 tcacccaagtgctatccgaa 230  Q
    |||| |||||| | ||||||    
T  9157316 tcacacaagtgttgtccgaa 9157297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 741540 - 741614
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  741540 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcacc 741614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 44706809 - 44706923
Alignment:
Q  105 ggtgatattggtcaatcacaa-tgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaa 203  Q
    ||||| ||||| ||||||||| ||  |||||| ||||||||||||||||||| |||| |||| | |||| |||||| |||||||||||||| |||| |||    
T  44706809 ggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaa 44706908  T
Q  204 ttctatgtcacccaa 218  Q
     ||||||||||||||    
T  44706909 ctctatgtcacccaa 44706923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 38674531 - 38674615
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||||||| |||||||||||| |||||| |||||||  |||||||||| |||| |||||||||||||||||| ||||| |||||    
T  38674531 ggtgatattggccaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattgtgacattatgattggccaatatcacc 38674615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 34062309 - 34062235
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||| ||||||||||||||||||||||||||  ||| |||||| |||| |||||| |||||||||||    
T  34062309 caatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcacc 34062235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 47303507 - 47303433
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattg 179  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||  ||| ||||||| ||||||    
T  47303507 ggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattg 47303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 21630118 - 21630032
Alignment:
Q  141 gaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||||||||||||| |||| ||||||||||| ||||||  ||||||||||||| |||| ||| | |||||||| |||||| |||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactttatgtcacgcaagtgatatcc 21630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 28395708 - 28395630
Alignment:
Q  146 agagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||||||||| |||| ||||||||||| ||||||  ||||||||||||| |||||||| ||||||| |||||| |||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcactcaactctatgttacccaaatgcta 28395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 46333978 - 46334056
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtca 189  Q
    ||||| |||||||||||| |||||| |||||||||||||| |||| |||| ||||||||||| ||||||  ||||||||    
T  46333978 attggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtca 46334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 46931994 - 46932059
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||||    
T  46931994 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 48993977 - 48993910
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  48993977 caagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtgcta 48993910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 29179738 - 29179673
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| |||||    
T  29179738 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 37155043 - 37155108
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||  ||||||||||||| ||||| |||||||||||| |||||| |||||    
T  37155043 acttgggtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 28395643 - 28395699
Alignment:
Q  85 acatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||||||||||||||||| ||||  |||||||||||| |||||| |||||    
T  28395643 acatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 28395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 1091687 - 1091620
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||||| ||||||||||||| |||| ||||||||  |||  |||||||||||| ||||||||||||    
T  1091687 acacttgggtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtg 1091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 1819515 - 1819570
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaag 160  Q
    ||||| |||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  1819515 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaag 1819570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 49444973 - 49444906
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||| ||||| ||||||| | ||||||||||| |||| ||| ||||||||||||||||||||    
T  49444973 caagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactctatgtcacccaagtgcta 49444906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 32540890 - 32540824
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||| ||||||||| |||  |||||||||||| ||||  ||||||||||||||||||| |||||    
T  32540890 cacttgggtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtg 32540824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 46932052 - 46931994
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||| |||| |||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  46932052 attgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 46931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 21630027 - 21630104
Alignment:
Q  64 aatagggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||||||  ||||||  ||||||| ||||| ||||||||||||| ||||  |||||||||||| |||||| |||||    
T  21630027 aatagggatatcacttgcgtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 36290548 - 36290483
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||  ||||  |||||||||||| ||||| ||||||    
T  36290548 acttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtg 36290483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 44706923 - 44706874
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||| ||||||||||||| ||||||||||||| ||||| |||||||||||    
T  44706923 ttgggtgacatagagttgggtgacattggtgacattggccaatcacaatg 44706874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 48498412 - 48498477
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| |||||||| |||| |||||||||||| |||   ||||||||||||    
T  48498412 acttgggtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtg 48498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 48994058 - 48993993
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||| ||||||||||||| ||||||||||||| ||||  |||||||||||  |||||| |||||    
T  48994058 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 28928803 - 28928855
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    ||||||| ||||| |||||||||||| ||| || |||||||||||||||||||    
T  28928803 ttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaac 28928855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 36381644 - 36381588
Alignment:
Q  165 gtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||||||| |||||| ||||||||||||||||||   |||||||||||| |||||||    
T  36381644 gtgacattgtgattggccaatgtcaccaatatcatcgaattctatgtcatccaagtg 36381588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 9157305 - 9157372
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    |||||||  ||||||||||||| ||||||||||| | ||||  |||||||||||| |||||| |||||    
T  9157305 acacttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 15220889 - 15220956
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||| ||| |||||| ||||| |||||||| |||| ||| |||||||||||||| |||||    
T  15220889 caagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctatgtcacccaaatgcta 15220956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 29179657 - 29179590
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  || |||||||||| |||| ||| ||||||||| ||||||||||    
T  29179657 caagcattgtgacattgtgattggtcagtgtcaccaatgtcacccaactctatgtcatccaagtgcta 29179590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 46932124 - 46932062
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtt 137  Q
    |||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||  ||||||||    
T  46932124 acacttgggtgacatagagttg-gtgacattggtgacattgaccaatcacaatgccacaatgtt 46932062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 12441103 - 12441018
Alignment:
Q  69 ggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaa 154  Q
    |||| |||||||||||||||||| ||  ||||||||||||  |||||  ||||||||||| | |||  |||| |||||||| ||||    
T  12441103 ggataacacttggatgacatagaatttggtgacattggtggcattggctaatcacaatgtcataatccttgtaaaagagagggaaa 12441018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 33219651 - 33219716
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgc 222  Q
    |||| ||| ||||||| ||||||| ||||||||||||| |||  ||| ||||||| ||||||||||    
T  33219651 caagcattatgacattgtgattgatcaatgtcaccaatgtcatccaactctatgttacccaagtgc 33219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 5995447 - 5995511
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||||| |||| ||||||  ||||||||||||| |||  ||| |||||||||||||||||    
T  5995447 caagcattgtggcattgtgattggtcaatgtcaccaatgtcatccaactctatgtcacccaagtg 5995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 31342252 - 31342312
Alignment:
Q  68 gggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgt 128  Q
    ||||| |||||||| ||||||||||||| ||||||  | ||| ||||| ||||||||||||    
T  31342252 gggataacacttgggtgacatagagttgggtgacaccgatgacattggccaatcacaatgt 31342312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 551191 - 551304
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaat 204  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||| |||| |||||| |||| |||||| ||||||||||||||||||  ||||    
T  551191 ggtgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaat 551290  T
Q  205 tctatgtcacccaa 218  Q
    ||||||||||||||    
T  551291 tctatgtcacccaa 551304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 17751036 - 17750893
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| |||| |||| ||| ||||| | |||||||||| |||||| |||||||||||||| |||  |||  ||||||||||| |||||||||    
T  17751036 tgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgacc 17750937  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    |||||||||||| ||| |||| |||||||||| ||||||||||||    
T  17750936 aatgtcaccaatgtca-tcaactctatgtcacacaagtgctatcc 17750893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 13043596 - 13043475
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgat 177  Q
    |||| |||||||||||||||||| |||||||| |||||  ||||||||| | |||||| ||||||||||||||||||| |||| |||||||||||  |||    
T  13043596 ttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtgacatttcgat 13043497  T
Q  178 tgaccaatgtcaccaatatcac 199  Q
    |||||||| || ||||||||||    
T  13043496 tgaccaatatcgccaatatcac 13043475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 12343232 - 12343126
Alignment:
Q  85 acatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaa 184  Q
    ||||||||||| |||| |||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||| |||||||| ||    
T  12343232 acatagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaa 12343133  T
Q  185 tgtcacc 191  Q
    |||||||    
T  12343132 tgtcacc 12343126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 24587558 - 24587454
Alignment:
Q  120 tcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaag 219  Q
    ||||||||| |||||| |||||||| || ||||||| |||| ||||||||||| ||||||||||||||||| ||| |||| ||| ||||||||||| |||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctatgtcacctaag 24587459  T
Q  220 tgcta 224  Q
    |||||    
T  24587458 tgcta 24587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 24618605 - 24618701
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattg 179  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||| | |||| || |||||||||||||||| |||| ||||||||||| ||||||    
T  24618605 tgacatagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattg 24618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 10521873 - 10521960
Alignment:
Q  103 ttggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcac 190  Q
    ||||||| ||||| |||||||||||| |||||| || |||||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  10521873 ttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcac 10521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 31654389 - 31654331
Alignment:
Q  133 atgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||    
T  31654389 atgtttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacc 31654331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 17750907 - 17750963
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgt 140  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  17750907 tgacatagagttga-tgacattggtgacattggtcaatcacaatgtcacaatgtttgt 17750963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 13043535 - 13043602
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||| ||| |||||  ||||||||||||||||||||||| |||||||||||||| |||||    
T  13043535 caagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctatgtcacccaaatgcta 13043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 24587465 - 24587523
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||| |||||| |||||    
T  24587465 tgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 24975749 - 24975815
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtga 142  Q
    |||||| |||||||||||||  |||||||||||| |||||||||||||||||  |||||| ||||||    
T  24975749 acttgggtgacatagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 24618652 - 24618584
Alignment:
Q  166 tgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccgaataat 234  Q
    ||||||| ||||||| ||||||||||||| |||| ||| |||||||||| ||||||||| || ||||||    
T  24618652 tgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcactcaagtgctacccaaataat 24618584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 17750980 - 17751047
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| |||| | ||||||||| ||||||||| ||| |||||||||| |||||||||    
T  17750980 caagcattgtgacattgtgatcggccaatgtcatcaatatcacccaactctatgtcacacaagtgcta 17751047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 24975812 - 24975749
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||| |||||| |||| ||||||||||||||||||||| |||  ||| ||||||||||||||||    
T  24975812 caagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctatgtcacccaagt 24975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 2315330 - 2315380
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||| |||||    
T  2315330 ggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaac 2315380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 12343178 - 12343232
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgt 211  Q
    |||| ||||||||||| |||||| |||||||||||||| |||| ||| |||||||    
T  12343178 caagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctatgt 12343232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 16514566 - 16514421
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| |||| |||||||| ||||  |||||||||||| |||||| ||||||||||||||||||| |||| ||| || |||  |    
T  16514566 cacttgggtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagt 16514467  T
Q  175 gattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  16514466 gattggccaatgtcaccaatgtcacccaactctatgtcacccaagt 16514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 6722093 - 6721974
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| |||||||||||||  ||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||| |    
T  6722093 cacttgggtgacatagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgt 6721994  T
Q  175 gattgaccaatgtcaccaat 194  Q
    |||||  |||||||||||||    
T  6721993 gattggtcaatgtcaccaat 6721974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 29508685 - 29508832
Alignment:
Q  74 acacttggatgacatagagttgagtgacattggtgatattggtcaatcacaa-tgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacatt 172  Q
    |||||| | ||||||||||||| ||||||||||||| ||||  ||||||||| ||  |||||| ||||||||||||||||||| |||| |||| | ||||    
T  29508685 acacttaggtgacatagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcatt 29508784  T
Q  173 atgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
     |||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  29508785 gtgattggccaatgtcaccaatatcacccaactctatgtcacccaagt 29508832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 14229357 - 14229462
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||| |||||| ||    
T  14229357 tgacatagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg-cc 14229455  T
Q  183 aatgtca 189  Q
    |||||||    
T  14229456 aatgtca 14229462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 14470596 - 14470740
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| ||||||||||||| ||||  ||||||||||||| ||||| ||||||||||||||||||| |||  ||||||||||| |||||| |     
T  14470596 tgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggct 14470695  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    ||||| ||||||||||  ||||| ||| |||| |||||| ||||||    
T  14470696 aatgttaccaatatcatccaatt-tatatcacacaagtgttatccg 14470740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 24116054 - 24115910
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgacc 182  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||  ||||| ||||||||||| | ||||| || | ||||| ||||| |||||| ||    
T  24116054 tgacatagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggcc 24115955  T
Q  183 aatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||| |||||| | |||||| ||||| |||| ||||||||||||    
T  24115954 aatgttaccaatgtgactcaactctatctcacacaagtgctatcc 24115910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 6217222 - 6217336
Alignment:
Q  77 cttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatga 176  Q
    ||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||| ||||||||||||||||||| |||  |||||| |||| |||    
T  6217222 cttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtga 6217321  T
Q  177 ttgaccaatgtcacc 191  Q
    ||| |||||||||||    
T  6217322 ttggccaatgtcacc 6217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 38933729 - 38933613
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| |||||||||||||  |||| |||||| ||||| |||||| ||||||||||||||||||| |||| |||||| |||| |    
T  38933729 cacttgggtgacatagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgt 38933630  T
Q  175 gattgaccaatgtcacc 191  Q
    |||||  ||||||||||    
T  38933629 gattggtcaatgtcacc 38933613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 32545871 - 32545937
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccg 228  Q
    |||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  32545871 attgtgacattatgattggccaatgtcaccaatgtcactaaactctatgtcacccaagtgctatccg 32545937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 33018686 - 33018620
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtga 142  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  33018686 acttgaatgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 32545930 - 32545782
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagt--attgtgacatt 172  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||| ||||| |||||| || ||||||||||| |||   || |   |||||||||     
T  32545930 cacttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcacaatgcttatgaaagagagataaaaaaaacttacttgtgacatc 32545831  T
Q  173 atgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
     || |||||||||||||||||| ||||  || ||||||||||| |||||    
T  32545830 gtggttgaccaatgtcaccaatgtcacctaactctatgtcacctaagtg 32545782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 37762039 - 37762122
Alignment:
Q  117 caatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcact 200  Q
    ||||||||||||  ||||| |||||||||||| |||||| |||| ||||||| ||| ||||||||| |||||||||||||||||    
T  37762039 caatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattgacccatgtcaccaatatcact 37762122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 2828696 - 2828610
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||| ||||| |||||||||||| |||||| || |||||||||||||||| |||| ||| ||||||| |||||| |||||||||||    
T  2828696 ggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacc 2828610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 37961862 - 37961768
Alignment:
Q  61 aataatagggatgacacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    |||||| ||| | |||||||| |||||||||||||||||| ||| |||| ||||  |||||||||||  |||||| |||||||||||||||||||    
T  37961862 aataattggggtaacacttgggtgacatagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaac 37961768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 15011391 - 15011298
Alignment:
Q  106 gtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcac 199  Q
    |||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||  |||||| |||| |||||| ||||| |||||||| ||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtcac 15011298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 2894069 - 2893989
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||  |||| ||||||| ||| |||||| |||||||||||    
T  2894069 attggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcacc 2893989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 14892399 - 14892323
Alignment:
Q  78 ttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaa 154  Q
    |||| |||||||||||||  |||||||||||| |||| |||||||||||||||||||  || |||||||||||||||    
T  14892399 ttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaa 14892323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 38933665 - 38933732
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| |||||||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||||||||    
T  38933665 caagcattgtgacattatgattggccaacgtcaccaatgtcacccaactctatgtcacccaagtgcta 38933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 29925580 - 29925682
Alignment:
Q  89 agagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtc 188  Q
    ||||||| |||| |||||||| ||||| |  ||||||||| | |||| ||||||||||||||||||| |||  |||||| |||| |||||| ||||||||    
T  29925580 agagttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtc 29925679  T
Q  189 acc 191  Q
    |||    
T  29925680 acc 29925682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 8534256 - 8534160
Alignment:
Q  107 tgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaa 203  Q
    |||||||||||||| ||||||| |||||  |||||||| |||||||||| ||| |||| | ||||| | ||||| |||||||| |||| ||||||||    
T  8534256 tgatattggtcaattacaatgtcacaattcttgtgaaatagagagaaacacaaatatttttacattgtaattgatcaatgtcatcaatgtcactcaa 8534160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 1945408 - 1945532
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||      || |||||||||||||| ||||  ||| ||||| | ||| |    
T  1945408 cacttggatgatataaagttgggtgacattggtgatattggtcaattacaatg------tgcttgtgaaagagagaaaaacttaagcattgtaatattgt 1945501  T
Q  175 gattgaccaatgtcaccaatatcactcaatt 205  Q
    |||||   |||||||| |||||||| |||||    
T  1945502 gattggttaatgtcactaatatcacccaatt 1945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 16514502 - 16514569
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  16514502 caagcattgtgacattgtgattggtcaatgtcaccaatctcacccaactctatgtcacccaagtgcta 16514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 9173115 - 9173058
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgt 140  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  |||||| ||||    
T  9173115 tgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgt 9173058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 37961784 - 37961848
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtg 221  Q
    |||| |||||| |||| ||||||  ||||||||| |||||||||||| |||||||||||||||||    
T  37961784 caagcattgtggcattgtgattggtcaatgtcacaaatatcactcaactctatgtcacccaagtg 37961848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 14892339 - 14892410
Alignment:
Q  158 aagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatccga 229  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||  ||| |||||||||||||| ||||| ||||    
T  14892339 aagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctatgtcacccaaatgctacccga 14892410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 35204145 - 35204212
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||| ||||||||| |||||||||||||| |||| || |  |||||||||||||||||||||||    
T  35204145 caaggattctgacattataattgaccaatgtcatcaatgtctcaaaattctatgtcacccaagtgcta 35204212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 6217284 - 6217222
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaag 219  Q
    |||| |||||| |||| |||||| |||||||||||||| |||| ||| |||||||||||||||    
T  6217284 caagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaag 6217222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 14229413 - 14229355
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacc 215  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||  || |||||||||||    
T  14229413 caagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctatgtcacc 14229355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 15011298 - 15011342
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtg 141  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||    
T  15011298 gtgacattggtgatattggccaatcacaatgccacaatgtttgtg 15011342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 24115928 - 24115976
Alignment:
Q  87 atagagttgagtgacattggtgatattggtcaatcacaatgttacaatg 135  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||    
T  24115928 atagagttgagtcacattggtaacattggccaatcacaatgttacaatg 24115976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 30610261 - 30610316
Alignment:
Q  164 tgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||||||||||| ||| ||||||||||||||  ||| ||||||||||||||||||||    
T  30610261 tgtgacattatggttggccaatgtcaccaatgccac-caattctatgtcacccaagt 30610316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 33018623 - 33018679
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtca 213  Q
    |||| ||||||||||| |||||||||||| |||||||| |||| ||| |||||||||    
T  33018623 caagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtca 33018679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 14470641 - 14470582
Alignment:
Q  168 acattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatcc 227  Q
    ||||| ||||||  ||||||||||||| |||| ||| |||||||||| ||||||||||||    
T  14470641 acattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacacaagtgctatcc 14470582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 16514421 - 16514468
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcac 123  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||    
T  16514421 acttgggtgacatagagttgggtgacattggtgacattggccaatcac 16514468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 29508832 - 29508781
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||||| ||||||||||||| |||| |||||||| ||||| |||||||||||    
T  29508832 acttgggtgacatagagttgggtgatattggtgacattggccaatcacaatg 29508781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 6722034 - 6722096
Alignment:
Q  162 attgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    ||||||||||| |||||| ||||| |||| ||| |||  ||| ||||||||||||||||||||    
T  6722034 attgtgacattgtgattggccaatatcactaatgtcaaccaactctatgtcacccaagtgcta 6722096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 9173044 - 9173117
Alignment:
Q  142 aaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacc 215  Q
    ||||| |||||||  |||| |||||| |||| |||||| ||||| |||||||| |||| ||| |||||||||||    
T  9173044 aaagaaagagaaatacaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatgtcacc 9173117  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 14464615 - 14464582
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcac 190  Q
    |||||||||||||||| |||||||||||||||||    
T  14464615 caagtattgtgacattgtgattgaccaatgtcac 14464582  T

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Target: scaffold0161 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 27217 - 27361
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatg 175  Q
    |||||| ||||||||||||| |||||||| |||||||||| |||||||||||| | |||  |||||||||||||||||||  ||| |||||| |||| ||    
T  27217 acttgggtgacatagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtg 27316  T
Q  176 attgaccaatgtcaccaatatcactcaattctatgtcacccaagt 220  Q
    |||| ||||| |||||||| |||| ||| ||||| ||||||||||    
T  27317 attggccaatatcaccaatgtcacccaactctatatcacccaagt 27361  T

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Target: scaffold0161; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 27361 - 27310
Alignment:
Q  76 acttggatgacatagagttgagtgacattggtgatattggtcaatcacaatg 127  Q
    |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  27361 acttgggtgatatagagttgggtgacattggtgatattggccaatcacaatg 27310  T

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Target: scaffold0016 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 49699 - 49815
Alignment:
Q  75 cacttggatgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattat 174  Q
    ||||||| ||||||||||||| ||||||||| ||| ||||  |||||||||||| |||||| |||||||||| |||||||| |||| |||||| |||| |    
T  49699 cacttgggtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgt 49798  T
Q  175 gattgaccaatgtcacc 191  Q
    ||||| |||||||||||    
T  49799 gattggccaatgtcacc 49815  T

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Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 49763 - 49696
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgcta 224  Q
    |||| ||||||||||| ||||||  |||||||| |||| |||| ||| ||||||||||||||||||||    
T  49763 caagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactctatgtcacccaagtgcta 49696  T

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Target: scaffold0047 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 63869 - 63783
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcacc 191  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||  |||||| |||| |||||| |||||||||||    
T  63869 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 63783  T

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Target: scaffold0180 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 19126 - 19198
Alignment:
Q  83 tgacatagagttgagtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| |||||| ||||| |||| ||||||||    
T  19126 tgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaac 19198  T

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Target: scaffold0180; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 19182 - 19113
Alignment:
Q  157 caagtattgtgacattatgattgaccaatgtcaccaatatcactcaattctatgtcacccaagtgctatc 226  Q
    |||| ||||||||||| ||||||| |||| ||| |||| |||| ||| |||||||||| ||| |||||||    
T  19182 caagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctatgtcacacaaatgctatc 19113  T

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Target: scaffold0481 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 2913 - 2963
Alignment:
Q  105 ggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaac 155  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  2913 ggtgatattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaac 2963  T

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Target: scaffold0536 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 4910 - 5009
Alignment:
Q  97 gtgacattggtgatattggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattgtgacattatgattgaccaatgtcaccaatat 196  Q
    ||||||||||||| || |  |||||||||| |||||||| |||||||||||||| ||||  |||   ||| ||||| | |||||||||| ||||||||||    
T  4910 gtgacattggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaacataag---tgtaacattgtaattgaccaatatcaccaatat 5006  T

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Target: scaffold1033 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 2319 - 2265
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattg 165  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||| |||| ||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 2319 - 2265
Alignment:
Q  111 attggtcaatcacaatgttacaatgtttgtgaaagagagagaaacgcaagtattg 165  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||| |||| ||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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