View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2277_low_20 (Length: 269)
Name: NF2277_low_20
Description: NF2277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2277_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 18351136 - 18350882
Alignment:
| Q |
1 |
caataacacaagtattgtccaagtaaatttctatgacataaaattaatgtgtataaaacaagtaacaatgttattggtagatgcataaattgtcaattac |
100 |
Q |
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| T |
18351136 |
caataacacaagtattgtccaggtaaatttctatgacataaaattaatgtgtacaaaacgagtaacaatgttattggtagatacataaattgccaattac |
18351037 |
T |
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| Q |
101 |
aaaagaatttatatattgaaattcatttctaaatctcatagaatacagtgaaataaaaatgaagnnnnnnnngataacctgacaaaaatacatgaatctc |
200 |
Q |
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| T |
18351036 |
aagagaatttatagattgaaatgcatttctaaatctcatagaatacagtgaaataaaaatgaagaaaaaaaagataacctgacaaaaatacatgaatctc |
18350937 |
T |
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| Q |
201 |
caggaagaagatttttagagtttacaaatgtgctccaaccattagtaagcaagtg |
255 |
Q |
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| T |
18350936 |
caggacgaagatttttagagtttacaaatgtgttccaaccattagtaagcaagtg |
18350882 |
T |
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