View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2277_low_30 (Length: 237)
Name: NF2277_low_30
Description: NF2277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2277_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45103946 - 45103724
Alignment:
| Q |
1 |
cttttgattctgcatgcactccaaaagctaaatttagttaaaattgttgcaacttgcaacttgtgtgtgttgtagtgcttatagtaccttcttaagtttt |
100 |
Q |
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| T |
45103946 |
cttttgattctgcatgcactccaaaagctaaatttagttaaaattgttgcaacttgcaacttgtttgtgttgtagtgcttatagtaccttcttaagtttt |
45103847 |
T |
|
| Q |
101 |
caagttttatagagaatagagactaggtagttttggcttcaatatttgtttgttgagaatgaagcattcttatattttaccagtagcattctgtttagtt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45103846 |
caagttttatggagaatagagactaggtagttttggcttcaatatttgtttgttgagaatgaagcattcttatattttaccagtagcattctgtgtagtt |
45103747 |
T |
|
| Q |
201 |
tttcttactttatcccttttagt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
45103746 |
tttcttactttatcccttttagt |
45103724 |
T |
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