View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2278_low_7 (Length: 245)
Name: NF2278_low_7
Description: NF2278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2278_low_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 17771849 - 17771626
Alignment:
| Q |
22 |
gactaatatccgcgtcgccgtcttcaacacttccaacagaaaaagactgacaaccctcaattgaagcaggatttaatattaaaactgatgatgtatttgt |
121 |
Q |
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| T |
17771849 |
gactaatatccgcgtcgccgtcttcaccacttccaacagaaaaagactgacaaccctcaattgaagcaggatttaatattaaaactgatgatgtatttat |
17771750 |
T |
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| Q |
122 |
cataagatttaaaccagttatttccatgtgatttgtcactgttgactctttttgtattaaattcccaattaaaaatggcactgcaaccgtcgaacttatt |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
17771749 |
cataagatttaaaccagttatttccatgtgatttgtcactgttgactctttttgtattaaattcccaattgaaaatggcactgcaaccgtcgaacttatt |
17771650 |
T |
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| Q |
222 |
tcctccataagttttcttttcttt |
245 |
Q |
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|||||||||||||||||||||||| |
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| T |
17771649 |
tcctccataagttttcttttcttt |
17771626 |
T |
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