View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2280_low_2 (Length: 468)

Name: NF2280_low_2
Description: NF2280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2280_low_2
NF2280_low_2
[»] chr7 (3 HSPs)
chr7 (30-451)||(9816946-9817368)
chr7 (30-451)||(10718871-10719293)
chr7 (200-451)||(20483938-20484190)
[»] chr1 (1 HSPs)
chr1 (41-451)||(15229566-15229976)
[»] chr4 (3 HSPs)
chr4 (116-451)||(23062094-23062430)
chr4 (120-402)||(32880707-32880990)
chr4 (128-213)||(43992238-43992323)
[»] chr8 (2 HSPs)
chr8 (116-414)||(21279133-21279432)
chr8 (292-324)||(16819948-16819980)
[»] chr2 (1 HSPs)
chr2 (19-402)||(28592750-28593134)
[»] chr6 (2 HSPs)
chr6 (116-451)||(25907096-25907432)
chr6 (283-451)||(13108864-13109023)
[»] chr5 (1 HSPs)
chr5 (198-451)||(30302013-30302266)
[»] scaffold0985 (1 HSPs)
scaffold0985 (132-215)||(457-540)


Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 30 - 451
Target Start/End: Complemental strand, 9817368 - 9816946
Alignment:
Q  30 ttgaaaattgtcgacgtgaattgaatcgttgtcgtaaccaaggggcagtggccgatccaaacacattgaaaaatttgcaaaagcgtatgacgcacttgat 129  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| | |||||||||||| ||||||||    
T  9817368 ttgaaaattgtcgacgtgatttgaatcgttgtcgtaaccaaggggcagcggctgatccaaacacattgacagattttcgaaagcgtatgacacacttgat 9817269  T
Q  130 gattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgcttaagcaacgtctaga 229  Q
    |||| || |||||||||||||  |||| |||||||||||||| ||||| ||| ||||||||||||| ||||||  ||||||||||  ||| |||||||||    
T  9817268 gattaaataggacaagtattgatggcatcgagctaagactcactggtatcgtgatggtgaccttaacactaaaaattttcatgctgcagccacgtctaga 9817169  T
Q  230 aaaa-ggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagggtattttgaaactt 328  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| || |    
T  9817168 aaaaaggtaaaccgtattaattttttggaaaatgatgtgggggtcagagtttcagatgagcaaggtatgtgtcaggttgcaaaagggtattttgagacat 9817069  T
Q  329 tatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaaccaccccttttcagtc 428  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| ||||||||||| |    
T  9817068 tatttttggagagtaatatcactcgtgcaccggttgtagacattatagaaaaagttgtttctgatgatgataatgctttaccgaccgccccttttcaggc 9816969  T
Q  429 tcatgagttcaaggacgctatgt 451  Q
    ||| ||||||||||| |||||||    
T  9816968 tcacgagttcaaggatgctatgt 9816946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 30 - 451
Target Start/End: Complemental strand, 10719293 - 10718871
Alignment:
Q  30 ttgaaaattgtcgacgtgaattgaatcgttgtcgtaaccaaggggcagtggccgatccaaacacattgaaaaatttgcaaaagcgtatgacgcacttgat 129  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| | |||||||||||| ||||||||    
T  10719293 ttgaaaattgtcgacgtgatttgaatcgttgtcgtaaccaaggggcagcggctgatccaaacacattgacagattttcgaaagcgtatgacacacttgat 10719194  T
Q  130 gattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgcttaagcaacgtctaga 229  Q
    |||| || |||||||||||||  |||| |||||||||||||| ||||| ||| ||||||||||||| ||||||  ||||||||||  ||| |||||||||    
T  10719193 gattaaataggacaagtattgatggcatcgagctaagactcactggtatcgtgatggtgaccttaacactaaaaattttcatgctgcagccacgtctaga 10719094  T
Q  230 aaaa-ggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagggtattttgaaactt 328  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| || |    
T  10719093 aaaaaggtaaaccgtattaattttttggaaaatgatgtgggggtcagagtttcagatgagcaaggtatgtgtcaggttgcaaaagggtattttgagacat 10718994  T
Q  329 tatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaaccaccccttttcagtc 428  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| ||||||||||| |    
T  10718993 tatttttggagagtaatatcactcgtgcaccggttgtagacattatagaaaaagttgtttctgatgatgataatgctttaccgaccgccccttttcaggc 10718894  T
Q  429 tcatgagttcaaggacgctatgt 451  Q
    ||| ||||||||||| |||||||    
T  10718893 tcacgagttcaaggatgctatgt 10718871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 451
Target Start/End: Original strand, 20483938 - 20484190
Alignment:
Q  200 aaattttttcatgcttaagcaacgtctagaaaaa-ggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgt 298  Q
    ||||||||||||||||  || |||| |||||||| |||||||||||| |  |  |||||||||||||||||| |     |||| |||||||| || ||||    
T  20483938 aaattttttcatgcttctgccacgtttagaaaaaaggtaaaccgtatcacctccctggaaaatgatgtggggatttgtatttctgatgaacatggaatgt 20484037  T
Q  299 gtcaggttgcaaaagggtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatga 398  Q
    ||||||| || ||||  |||||||  | |||||||||||||| ||| | ||   ||||||| || ||  | ||||||||||||  ||| |||||||||||    
T  20484038 gtcaggtagcgaaagattattttgcgaatttatttttggagaataatagcatccgtgcaccagtggttgaaattatagaaaaatgtgtctttgatgatga 20484137  T
Q  399 taatgttttactaaccaccccttttcagtctcatgagttcaaggacgctatgt 451  Q
    ||||||||||||||||  ||||||| || | |||||  | |||||||||||||    
T  20484138 taatgttttactaaccttccctttttaggcacatgaacttaaggacgctatgt 20484190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 41 - 451
Target Start/End: Original strand, 15229566 - 15229976
Alignment:
Q  41 cgacgtgaattgaatcgttgtcgtaaccaaggggcagtggccgatccaaacacattgaaaaatttgcaaaagcgtatgacgcacttgatgattcaagagg 140  Q
    |||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||||  ||||| | ||||||||||||||||||||| ||||||||||    
T  15229566 cgacatgaattgaatcgttgtcgtaaccaaggggcagcggctgatccaaacaaattgaccaatttacgaaagcgtatgacgcacttgattattcaagagg 15229665  T
Q  141 acaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgcttaagcaacgtctag-aaaaaggtaaa 239  Q
    | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    || |||||| ||| || ||| | |||||||||||    
T  15229666 ataagtattggcggcagcgtgctaagactcattggtaccg-tatggtgaccttaatactaaaaaaattgatgcttcagccacatcttgaaaaaaggtaaa 15229764  T
Q  240 ccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagggtattttgaaactttatttttggag 339  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||| |  ||||||| ||||||||||||||||| ||||||||||||    
T  15229765 ccgtattaattttttggaaaatgatgtgggagtccgagtttcagatgaacaaggtatgcgctaggttgctaaagggtattttgaaacattatttttggag 15229864  T
Q  340 agtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaaccaccccttttcagtctcatgagttca 439  Q
    ||||||| |||| || || |||||||| ||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||| | ||||||||||    
T  15229865 agtaacagcactcgtacatcggttgtagacattatagaaaaagttctttctgttgatgataatgttttactaaccgccccttttcaggcccatgagttca 15229964  T
Q  440 aggacgctatgt 451  Q
    ||| ||||||||    
T  15229965 agggcgctatgt 15229976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 116 - 451
Target Start/End: Complemental strand, 23062430 - 23062094
Alignment:
Q  116 atgacgcacttgatgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgctt 215  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||| || ||||| ||| |||||||| | ||||| ||||||||||||||||    
T  23062430 atgacacatttgatgattcaagaggataagtattggcgacagcgagcaaagacacactggtatcgtgatggtgacttgaataccaaattttttcatgctt 23062331  T
Q  216 aagcaacgtctagaaa-aaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagg 314  Q
     ||| ||||| ||||| ||||||||||| ||||||||| |||| |||||||  ||||| | | || | ||||||||||| ||| |||||||||||||||     
T  23062330 cagccacgtcaagaaagaaggtaaaccgcattaattttttggataatgatgaaggggtacgaattgctgatgaacaaggcatgagtcaggttgcaaaaga 23062231  T
Q  315 gtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaacc 414  Q
     |||||||| ||||||||||| ||||| || |  ||| ||||||||||||| || || |||||||||||||| | || |||||||||| || | ||||||    
T  23062230 atattttgagactttatttttagagagcaatagtactcgtgcaccggttgttaatataatagaaaaagttgtgtctggtgatgataatattatgctaacc 23062131  T
Q  415 accccttttcagtctcatgagttcaaggacgctatgt 451  Q
     | || |||||| || | || || |||||||||||||    
T  23062130 gctccctttcaggctgaagaatttaaggacgctatgt 23062094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 120 - 402
Target Start/End: Original strand, 32880707 - 32880990
Alignment:
Q  120 cgcacttgatgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgcttaagc 219  Q
    |||| ||||||||||||||||| |||||| || | |||||||| ||||| || ||||| | | |||||||| | ||||| |||| ||||||||||| | |    
T  32880707 cgcatttgatgattcaagaggataagtatgggtgacagcgagcaaagacacactggtatcatgatggtgacttgaataccaaatattttcatgcttcaac 32880806  T
Q  220 aacgtctagaaa-aaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagggtat 318  Q
     ||||| ||||| ||||||||||| |||||| || |||| ||| |||  ||||| | | || | ||||||||||| ||| |||||||||||||||  |||    
T  32880807 cacgtcaagaaagaaggtaaaccgcattaatgttttggataataatgaaggggtacgaattgctgatgaacaaggcatgcgtcaggttgcaaaagaatat 32880906  T
Q  319 tttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataat 402  Q
    ||||| ||||||||||| ||||| || |  ||| ||||||||||||| || || |||||||||||||| | |||||||||||||    
T  32880907 tttgagactttatttttagagagcaatagtactcgtgcaccggttgttaatataatagaaaaagttgtgtctgatgatgataat 32880990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 43992323 - 43992238
Alignment:
Q  128 atgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgc 213  Q
    |||||||||||||| ||||||||| | ||  |||| || ||||||||||| ||| |||||||  | ||||| || |||||||||||    
T  43992323 atgattcaagaggataagtattggagacaaagagcaaaaactcattggtatcgtgatggtgatttaaatacaaatttttttcatgc 43992238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 116 - 414
Target Start/End: Complemental strand, 21279432 - 21279133
Alignment:
Q  116 atgacgcacttgatgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgctt 215  Q
    |||||||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||| ||| |||||||| | ||||| |||   |||||||| |    
T  21279432 atgacgcaattgatgattcaagaagataactattggcggcaacgagctaagacacattggtatcgtgatggtgacgtgaatacaaaaaaatttcatgcat 21279333  T
Q  216 aagcaacgtctagaaa-aaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagg 314  Q
     ||| || || ||||| ||||||||||  |||||||||||||| |||||||   |||| | |||| | ||||||||||| |||||||||||||||||||     
T  21279332 cagccacatcaagaaagaaggtaaaccacattaattttctggataatgatgaacgggtacgagttgctgatgaacaaggcatgtgtcaggttgcaaaaga 21279233  T
Q  315 gtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaacc 414  Q
     |||||||| ||||||||||| |||||||| |  |||  ||||||||||||| | || ||||||||| |||| |||||||||||||||||| | ||||||    
T  21279232 atattttgacactttatttttagagagtaatagtactcctgcaccggttgtagatataatagaaaaatttgtgtttgatgatgataatgttatgctaacc 21279133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16819948 - 16819980
Alignment:
Q  292 ggtatgtgtcaggttgcaaaagggtattttgaa 324  Q
    |||||||||||||||||||| ||||||||||||    
T  16819948 ggtatgtgtcaggttgcaaaggggtattttgaa 16819980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 19 - 402
Target Start/End: Complemental strand, 28593134 - 28592750
Alignment:
Q  19 taaagcaagaa-ttgaaaattgtcgacgtgaattgaatcgttgtcgtaaccaaggggcagtggccgatccaaacacattgaaaaatttgcaaaagcgtat 117  Q
    ||||||||||| ||||||||||||| ||||| ||||| |||||||| |  |||||||| | ||| ||||| |     |||| ||| ||||  || || ||    
T  28593134 taaagcaagaaattgaaaattgtcgtcgtgacttgaaccgttgtcggagtcaaggggctgcggctgatcctagtttgttgacaaacttgcgcaaacgcat 28593035  T
Q  118 gacgcacttgatgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgcttaa 217  Q
    ||| || ||||| ||||||||||| ||||||||||| || ||||| ||||| || ||||| ||| |||||||| | ||||| |||||||||||||||| |    
T  28593034 gacacatttgat-attcaagaggataagtattggcgacaacgagcaaagacacactggtatcgtgatggtgacttgaataccaaattttttcatgcttca 28592936  T
Q  218 gcaacgtctagaaa-aaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagggt 316  Q
    || ||||| ||||| ||| ||||||| ||||||||| |||| |||||||  ||||| | | || | ||||||||||| ||| |||||||||||||||  |    
T  28592935 gccacgtcaagaaagaagataaaccgcattaattttttggataatgatgaaggggtacgaattgctgatgaacaaggcatgagtcaggttgcaaaagaat 28592836  T
Q  317 attttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataat 402  Q
    ||||||| ||||||||||| ||||| || |  ||| ||||||||||||| || || |||||||||||||| | |||||||||||||    
T  28592835 attttgagactttatttttagagagcaatagtactcgtgcaccggttgttaatataatagaaaaagttgtgtctgatgatgataat 28592750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 7e-50; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 116 - 451
Target Start/End: Complemental strand, 25907432 - 25907096
Alignment:
Q  116 atgacgcacttgatgattcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgctt 215  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||| || | ||| ||| |||||||| | ||||| |||||| |||||||||    
T  25907432 atgacacatttgatgattcaagaggataagtattggcgacagcgagcaaagacacacttgtatcgtgatggtgacttgaataccaaatttcttcatgctt 25907333  T
Q  216 aagcaacgtctagaaa-aaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatgtgtcaggttgcaaaagg 314  Q
     ||| | ||| ||||| ||||||||||| ||||||||| |||| |||||||  ||||| | | || | ||||||||||| ||| ||||||| |||||||     
T  25907332 cagccatgtcaagaaagaaggtaaaccgcattaattttttggataatgatgaaggggtacgaattgctgatgaacaaggcatgagtcaggtggcaaaaga 25907233  T
Q  315 gtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatgataatgttttactaacc 414  Q
     |||||||| ||||||||||| ||||| || |  ||| ||||||||||||| || || |||||||||||||| | ||||||||||||| || |  |||||    
T  25907232 atattttgagactttatttttagagagcaatagtactcgtgcaccggttgttaatataatagaaaaagttgtgtctgatgatgataatattatgataacc 25907133  T
Q  415 accccttttcagtctcatgagttcaaggacgctatgt 451  Q
     | || |||||| || | || || |||||||||||||    
T  25907132 gctccctttcaggctgaagaatttaaggacgctatgt 25907096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 451
Target Start/End: Complemental strand, 13109023 - 13108864
Alignment:
Q  283 gatgaacaaggtatgtgtcaggttgcaaaagggtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaag 382  Q
    ||||||||||| ||| ||||| ||||||| |  |||||||||||||||||||| |||||||| |        ||||| |||||| ||||  |||||||||    
T  13109023 gatgaacaaggcatgcgtcagattgcaaa-gaatattttgaaactttatttttagagagtaata--------gcaccagttgtagacatagtagaaaaag 13108933  T
Q  383 ttgtttttgatgatgataatgttttactaaccaccccttttcagtctcatgagttcaaggacgctatgt 451  Q
    || | | |||||||||||||||| | |||| | | |||||||||  | | ||||| |||||||||||||    
T  13108932 ttttgtctgatgatgataatgttatgctaatcgctccttttcaggatgaagagtttaaggacgctatgt 13108864  T

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Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 198 - 451
Target Start/End: Original strand, 30302013 - 30302266
Alignment:
Q  198 ctaaattttttcatgcttaagcaacgtctagaaaaaggtaaaccgtattaattttctggaaaatgatgtgggggtccaagtttcagatgaacaaggtatg 297  Q
    |||||||||||||||||| ||| ||||| ||||| |||||||||| ||||||||| |||| |||||||  ||||| | | || | ||||||||||| |||    
T  30302013 ctaaattttttcatgcttcagccacgtcaagaaagaggtaaaccgcattaattttttggataatgatgaaggggtacgaattgctgatgaacaaggcatg 30302112  T
Q  298 tgtcaggttgcaaaagggtattttgaaactttatttttggagagtaacatcacttgtgcaccggttgtaaacattatagaaaaagttgtttttgatgatg 397  Q
     |||||||||||||||  |||||||| ||||||||||| ||||| || |  ||| ||||||||||||  || || |||||||||||||| | ||||||||    
T  30302113 agtcaggttgcaaaagaatattttgagactttatttttagagagcaatagtactcgtgcaccggttggtaatataatagaaaaagttgtgtctgatgatg 30302212  T
Q  398 ataatgttttactaaccaccccttttcagtctcatgagttcaaggacgctatgt 451  Q
    ||||| || | |||||| | || |||||| || | || || |||||||||||||    
T  30302213 ataatattatgctaaccgctccctttcaggctgaagaatttaaggacgctatgt 30302266  T

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Target: scaffold0985 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0985
Description:

Target: scaffold0985; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 540 - 457
Alignment:
Q  132 ttcaagaggacaagtattggcggcagcgagctaagactcattggtaccgttatggtgaccttaatactaaattttttcatgctt 215  Q
    ||||||| |||| ||||||| ||||| |||||||||| || ||||||||| |||| ||||||||||| ||||| ||||||||||    
T  540 ttcaagaagacatgtattggaggcagagagctaagacacactggtaccgtgatggagaccttaataccaaattctttcatgctt 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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