View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2280_low_6 (Length: 300)
Name: NF2280_low_6
Description: NF2280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2280_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 6032403 - 6032678
Alignment:
| Q |
8 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
107 |
Q |
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| T |
6032403 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
6032502 |
T |
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| Q |
108 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6032503 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
6032602 |
T |
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| Q |
208 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataat |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6032603 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataat |
6032678 |
T |
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