View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2281_high_10 (Length: 415)
Name: NF2281_high_10
Description: NF2281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2281_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 10 - 398
Target Start/End: Complemental strand, 36923479 - 36923091
Alignment:
| Q |
10 |
agaagaaactttagctgtgagaagcaaacttgaggactctggacattttcattttcttcagcgtcatcttcaatgatttgctccaattcatcacactttt |
109 |
Q |
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| T |
36923479 |
agaagaaactttagctgtgagaagcaaacttgaggactctggacattttcattttcttcagcgtcatcttcaatgatttgatccaattcatcacactgtt |
36923380 |
T |
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| Q |
110 |
ctaccactaggatcttcaacagaggcaggactctcgagacagaaatggagaagatagactttagttttggacaattgcaaatgtttattttgtgaagatg |
209 |
Q |
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| T |
36923379 |
ctaccactaggatcttcaacagaggcaggactctcaagacagaaatggagaagatagactttagttttggacaattgcaaatgtttattttgtgaagatg |
36923280 |
T |
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| Q |
210 |
ttgaaggctcaaactatgtttggcacccatccatatatacattagctttggcaaattgacacacttaaggtcttctaaccaagatatcacttgttgtcca |
309 |
Q |
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| T |
36923279 |
ttgaaggctcaaactatgtttggcacccatccatatatacattagctttggcaaattgacacacttaaggtcttctaaccaagatatcacttgttgtcca |
36923180 |
T |
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| Q |
310 |
ttatcacttgggaatcccttcatttgaaatatgccttcaatttctgatccgttctcaataacaaaagacattaacttcctctcaatact |
398 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
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| T |
36923179 |
ttctcacttgggaatcccttcatttgaaatatgccttcaatttctgatccgttctcaataataaaagacattaacttcttctcaatact |
36923091 |
T |
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