View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2281_high_21 (Length: 306)
Name: NF2281_high_21
Description: NF2281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2281_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 45146415 - 45146131
Alignment:
| Q |
1 |
actaattagcaactccttgtataaagtattgtgcatctataacagtattcaatggaacatcttaattcagtttataataactctttttgtgacctaactc |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45146415 |
actaattagcaactccttatataaagtattgtgcatctataagagtattcaatggaacatcttaattcagtttataataactctttttgtgacctaactc |
45146316 |
T |
|
| Q |
101 |
ttaataaaagcatcaattgtcaagactaaaacacatgagaagagtccggcctaaaagatttatctatcaattagattagagaaccctatgacttaagtag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || |
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| T |
45146315 |
ttaataaaagcatcaattgtcaagactaaaacacatgagaagagtccggcctaaaagatttatctattaattagattagagaaccctataacttaaatat |
45146216 |
T |
|
| Q |
201 |
cacattgaacaattttatttactcaacgcggaacacctaacgttgtaatgttgtatatcttcctttgtggtgtgttacttgtgaa |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45146215 |
cacattgaacaattttatttactcaacgcggaacacctaacgttgtaatgttgtatatcttcctttgtggtgtgttacttgtgaa |
45146131 |
T |
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