View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2281_high_31 (Length: 246)
Name: NF2281_high_31
Description: NF2281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2281_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 50528688 - 50528926
Alignment:
| Q |
1 |
ttgaagtgggtccctttcctttgtgaaagattgtgaataccattcagaaaacactaatcccagacaatattcacatcacaccatcca----cacacgttg |
96 |
Q |
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| T |
50528688 |
ttgaagtgggtccttttcctttgtgaaagattgtgaataccattcagaaaacactaatcccagacaatattcacatcacaccatccatccacacacgttg |
50528787 |
T |
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| Q |
97 |
ccaaggaattaaaaacacagcaatcaaaaaacatatact----tacttagacatgaaaaaccttatataattaagaggaagcaagcacattggaacatac |
192 |
Q |
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| T |
50528788 |
ccaaggaattaaaaacacagcaatcaaaaaacatatacttacttacttagacatgaaaaaccttatataattaagaggaagcaagcacattggaacatac |
50528887 |
T |
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| Q |
193 |
caagaaaagcagaggcgttgacaggagtggatgtctttg |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
50528888 |
caagaaaagcagaggcgttgacaggagtggatgtctttg |
50528926 |
T |
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