View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2281_low_27 (Length: 264)
Name: NF2281_low_27
Description: NF2281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2281_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 9696819 - 9696575
Alignment:
| Q |
1 |
ataaattaattaattattcaatagaaaatatgattaaacttactatttattttatgacgtatatctagtgttttctacacacaattgtaaaaaataattt |
100 |
Q |
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| T |
9696819 |
ataaattaattaattattcaatagaaaatatgattaaacttactatttattttatgacgtatatctagtgttttccacacacaattgtaaaaattaattt |
9696720 |
T |
|
| Q |
101 |
ctcaagatggttataactacgttgttgcattttcaggat--ttcaaacctaagacctctaattaaacaaaatattacttgaatcatgtgattannnnnnn |
198 |
Q |
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| T |
9696719 |
ctcaagatggttataattacgttgttgcatttttaggatgcttcgaacctaaaacctctaattaaacaaaatattacttgaatcatgtgatta-tttttt |
9696621 |
T |
|
| Q |
199 |
ncatcacctagtgaagttgagtagttattatttaatttgatcgcgt |
244 |
Q |
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| T |
9696620 |
tcatcacctagtgatgttaagtagttattatttaatttgatcgcgt |
9696575 |
T |
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