View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2281_low_38 (Length: 213)
Name: NF2281_low_38
Description: NF2281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2281_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 43499048 - 43498869
Alignment:
| Q |
19 |
aacctaatatatttgatttctttaacagtgttttaagttagcataactcttgaa-aaaaccaacgaatgactcttgcatttaaaaatattcaggaa-gnn |
116 |
Q |
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| T |
43499048 |
aacctaatatatttgatttctttaacagtgttttaagttagcataactcttgaaaaaaaccaacgaatgactcttgcatttaaaaatattcaggaaggaa |
43498949 |
T |
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| Q |
117 |
nnnnnnnncagatgaaagcgacaaagaggagtttcgggtgtaagaaaaacattctaaaaatggatttgtactattggtgt |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43498948 |
aaaaaaaacagatgaaagcgacaaagaggagtttcgggtgtaagaaaaacattctaaaaatggatttgtactattggtgt |
43498869 |
T |
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