View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2282_high_5 (Length: 360)

Name: NF2282_high_5
Description: NF2282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2282_high_5
NF2282_high_5
[»] chr6 (42 HSPs)
chr6 (1-231)||(5103971-5104202)
chr6 (206-360)||(5103803-5103957)
chr6 (1-206)||(5094713-5094918)
chr6 (1-192)||(5158638-5158831)
chr6 (206-360)||(5095039-5095194)
chr6 (224-360)||(5424642-5424778)
chr6 (227-360)||(5349269-5349402)
chr6 (206-360)||(5158400-5158554)
chr6 (232-360)||(5068050-5068177)
chr6 (1-149)||(5424425-5424573)
chr6 (1-149)||(5369132-5369280)
chr6 (1-152)||(5068253-5068404)
chr6 (7-149)||(5349055-5349197)
chr6 (224-354)||(5369378-5369504)
chr6 (1-132)||(5342366-5342497)
chr6 (1-154)||(5133082-5133235)
chr6 (267-360)||(5355526-5355619)
chr6 (261-352)||(5074617-5074708)
chr6 (1-100)||(5382320-5382419)
chr6 (1-138)||(5355809-5355946)
chr6 (261-354)||(5396117-5396210)
chr6 (262-353)||(5132794-5132885)
chr6 (2-132)||(5395716-5395846)
chr6 (2-87)||(5183196-5183281)
chr6 (261-360)||(5446132-5446231)
chr6 (1-52)||(5691390-5691441)
chr6 (261-354)||(5182781-5182874)
chr6 (1-100)||(5175538-5175637)
chr6 (1-131)||(5261346-5261476)
chr6 (1-100)||(5277365-5277464)
chr6 (1-86)||(5432079-5432164)
chr6 (267-356)||(5432474-5432563)
chr6 (1-53)||(5075009-5075061)
chr6 (295-353)||(5147799-5147857)
chr6 (287-357)||(5261007-5261077)
chr6 (287-357)||(5285005-5285075)
chr6 (267-356)||(5175928-5176017)
chr6 (267-356)||(5277755-5277844)
chr6 (1-112)||(5285364-5285475)
chr6 (1-56)||(5148234-5148289)
chr6 (263-305)||(5342693-5342735)
chr6 (261-352)||(5691013-5691101)
[»] chr4 (7 HSPs)
chr4 (3-138)||(4125633-4125768)
chr4 (3-138)||(4322295-4322430)
chr4 (3-136)||(4334226-4334359)
chr4 (3-138)||(4351903-4352038)
chr4 (3-152)||(4343615-4343764)
chr4 (3-138)||(4359084-4359219)
chr4 (1-100)||(4135013-4135112)
[»] chr7 (2 HSPs)
chr7 (1-132)||(36215091-36215222)
chr7 (267-360)||(36214726-36214819)
[»] chr5 (2 HSPs)
chr5 (1-89)||(8876475-8876563)
chr5 (267-360)||(8876923-8877016)
[»] scaffold0294 (2 HSPs)
scaffold0294 (1-109)||(9890-9998)
scaffold0294 (261-360)||(9538-9637)
[»] chr8 (1 HSPs)
chr8 (81-135)||(3399720-3399774)
[»] chr2 (1 HSPs)
chr2 (1-131)||(22585521-22585651)


Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 5104202 - 5103971
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5104202 gaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagctcgaggagcgttgcaggttgtggtttcatgacgatgt 5104103  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttatt-ttttaaatctggaatgaaaaataaaaattgatgattcaattgttaccattc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5104102 gcttcatgtattgtcagaacatacggtaagaacttcattttctttattgttttaaatctggaaagaaaaataaaaattgatgattcaattgttaccattc 5104003  T
Q  200 atttgttttaatgcaagtttcacagccttgta 231  Q
    |||||||||||||||||||||||  |||||||    
T  5104002 atttgttttaatgcaagtttcactcccttgta 5103971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 206 - 360
Target Start/End: Complemental strand, 5103957 - 5103803
Alignment:
Q  206 tttaatgcaagtttcacagccttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5103957 tttaatgcaagtttcacagccttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgc 5103858  T
Q  306 caagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5103857 caagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 5103803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5094713 - 5094918
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  5094713 gaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagctcgaggagcgttgcaggttgtggtttcatgatgatgt 5094812  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttattttttaaatctggaatgaaaaataaaaattgatgattcaattgttaccattca 200  Q
    |||||||||||| |||||||| || ||||||||||||||| ||||||  ||||||||||||| | |||| ||||||||||||||||||||||| ||||||    
T  5094813 gcttcatgtattatcagaacaaactgtaagaacttcatttgctttatcatttaaatctggaaaggaaaagaaaaattgatgattcaattgttagcattca 5094912  T
Q  201 tttgtt 206  Q
    ||||||    
T  5094913 tttgtt 5094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 5158831 - 5158638
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  5158831 gaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcaccagaggagatcgaggagcgttgcaggttgtggtttcatgacgatgt 5158732  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttatt--ttttaaatctggaatgaaaaataaaaattgatgattcaattgtt 192  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||||||||||||||    
T  5158731 gcttcatgtattatcagaacaaactgtaagaacttcattttctttattttttttaaatttggaaaggaaaacagaaattgatgattcaattgtt 5158638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 206 - 360
Target Start/End: Original strand, 5095039 - 5095194
Alignment:
Q  206 tttaatgcaagtttcacagccttgtatctttaagctttgcatgtttttctttttg-tttcaaagggaacaaaagctattaagggactggctttgaagttg 304  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||     
T  5095039 tttaatgcaagtttatctgccttgtatctttaagctttgcatgtttttctttttgctttcaaagggaacaaaagctattaaggggctgactttgaagttc 5095138  T
Q  305 ccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5095139 ccaagagccaatgaaaaatgttttagtactaaagcattcaagaagatgacgagact 5095194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 224 - 360
Target Start/End: Original strand, 5424642 - 5424778
Alignment:
Q  224 gccttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaat 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| | ||||||||||    
T  5424642 gccttgtatctttatgctttgcatgtttttctttttgtttcaaagggaacaaaaacgattaaggggctggctttgaagttgccaagagctaatgaaaaat 5424741  T
Q  324 gttttagtactaaagcattcaagaagatgaagagact 360  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5424742 gttttagtactaaagcattcaagaagatgacgagact 5424778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 5349269 - 5349402
Alignment:
Q  227 ttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgtt 326  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  5349269 ttgtatctttaagctttgcatgtttttgtttttgtttctaagggaacaacaactattaaggggctggctttgaagttgccaagagctaatgaaaaatgtt 5349368  T
Q  327 ttagtactaaagcattcaagaagatgaagagact 360  Q
    ||||||||||||||||||||||||||||||||||    
T  5349369 ttagtactaaagcattcaagaagatgaagagact 5349402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 206 - 360
Target Start/End: Complemental strand, 5158554 - 5158400
Alignment:
Q  206 tttaatgcaagtttcacagccttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgc 305  Q
    |||||| |||||||  | |||||||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||| ||||||||||||||||    
T  5158554 tttaatacaagtttatctgccttgtatctttaagctttgcatgtgtttctttttgttttgaagggaacaaaaactattaaggggctggctttgaagttgc 5158455  T
Q  306 caagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
     |||| | |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5158454 aaagagctaatgaaaaatgtttcagtactaaagcattcaagaagatgaagagact 5158400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 5068177 - 5068050
Alignment:
Q  232 tctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagt 331  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5068177 tctttaagttttgcat-tttttctttttgtttcaaagggaactaaaactattaaggggctggctttgaagttgccaagatctaatgaaaaatgttttagt 5068079  T
Q  332 actaaagcattcaagaagatgaagagact 360  Q
    |||||||||||||||||||||||||||||    
T  5068078 actaaagcattcaagaagatgaagagact 5068050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5424425 - 5424573
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||| |||||    
T  5424425 gaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcatgaggatgt 5424524  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttattt 149  Q
    |||||||||||| ||||| || || ||||||||||||| | ||||||||    
T  5424525 gcttcatgtattatcagatcaaactgtaagaacttcatatgctttattt 5424573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5369132 - 5369280
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||| |||||    
T  5369132 gaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcatgaggatgt 5369231  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttattt 149  Q
    |||||||||||| ||||| || || |||||| |||||| | ||||||||    
T  5369232 gcttcatgtattatcagatcaaactgtaagatcttcatatgctttattt 5369280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5068404 - 5068253
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||| ||| || ||||     
T  5068404 gaatgcatgatttgttgcgagatatgggaagagaaatcgttcgtgggaaatcaccagaagagctcgaggagcgttgcaggttgtggtttcaggaggatgc 5068305  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttatttttt 152  Q
    |||||| ||||| |||||||| || ||||||||||| | | |||||||||||    
T  5068304 gcttcaagtattatcagaacaaactgtaagaacttcgtatgctttatttttt 5068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 5349055 - 5349197
Alignment:
Q  7 atgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgcttca 106  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||| ||| || |||||||||||    
T  5349055 atgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcaccagaagagctcgaggagcgttgcaggttctggtttcaggaggatgtgcttca 5349154  T
Q  107 tgtattgtcagaacatacggtaagaacttcattttctttattt 149  Q
    ||| || ||||| || || ||||||||||||| | ||||||||    
T  5349155 tgttttatcagatcaaactgtaagaacttcatatgctttattt 5349197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 5369378 - 5369504
Alignment:
Q  224 gccttgtatctttaagctttgcatgtttttctttttgtttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaat 323  Q
    ||||||||||||||||||     ||| ||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||     
T  5369378 gccttgtatctttaagct----ctgtatttttttttctttcaaagggaacaaaagctattaaggggctggcgttgaagttgccaagagctaatgaaaaac 5369473  T
Q  324 gttttagtactaaagcattcaagaagatgaa 354  Q
    ||||||| |||||||||||||||||||||||    
T  5369474 gttttagcactaaagcattcaagaagatgaa 5369504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5342366 - 5342497
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    ||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||| | | | || |||||    
T  5342366 gaatgcacgatttgctgcgagatatgggaagagaaatcgttcgtgagaaatcaccaaaggagcttggggagcgtagcaggttgtgctttaaggaggatgt 5342465  T
Q  101 gcttcatgtattgtcagaacatacggtaagaa 132  Q
    |||| ||||||| |||||||| || |||||||    
T  5342466 gcttgatgtattatcagaacaaaccgtaagaa 5342497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5133235 - 5133082
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||  ||||||| |||| | ||||||||||||||||  |||||| ||| || |||||    
T  5133235 gaatgcatgatttgttgagagatatgggaagagaaattattcgtgaagaatcaccggaggtgtttgaggagcgttgcagactgtggtttcacgaggatgt 5133136  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcattttctttattttttaa 154  Q
    |||| ||||| | ||| |||| || ||||||||||| | | |||| ||||||||    
T  5133135 gcttgatgtactatcaaaacaaacagtaagaacttcttatgctttgttttttaa 5133082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 5355619 - 5355526
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||    ||| |||||||||||||||||||||||| |||||||||||||||||    
T  5355619 agggaactaaagctataaagggattggctttgaagttgccaagagttgatgcaaaatgttttagtactaaagcatttaagaagatgaagagact 5355526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 352
Target Start/End: Complemental strand, 5074708 - 5074617
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatg 352  Q
    ||||| |||||||||||| | || ||||| ||||||||||||||||||||   |||| |||||||||||||||||||||||| |||||||||    
T  5074708 tttcacagggaacaaaagttgttgagggattggctttgaagttgccaagagaaaatgcaaaatgttttagtactaaagcatttaagaagatg 5074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5382320 - 5382419
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    ||||||||||||||||  | |||||||| ||||||||||||||||| ||||||||| |||| | |||||||||| ||||||| |||| |||||| |||||    
T  5382320 gaatgcatgatttgttaagggatatgggaagagaaatcattcgtgaaaaatcaccaaaggatcctgaggagcgtagcaggttatggtttcatgaggatgt 5382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5355946 - 5355809
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||| | ||||||||||| |||||| || |||||||||||||||| ||||| | |||||  ||| |||| ||||||  |||||| |||||    
T  5355946 gaatgcatgatttgctacgagatatgggaagagaagtcgttcgtgagaaatcaccggaggaccctgaggcacgtagcagattgtggcttcatgatgatgt 5355847  T
Q  101 gcttcatgtattgtcagaacatacggtaagaacttcat 138  Q
    |||| |||| || ||||| ||  | |||||||||||||    
T  5355846 gcttgatgttttatcagatcaatctgtaagaacttcat 5355809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 5396117 - 5396210
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaa 354  Q
    ||||| |||||||||||||| || ||||||| |||||||| ||||||| | |  |||||||||| |||||||| ||||||||||||||||||||    
T  5396117 tttcatagggaacaaaagctgttgagggactagctttgaaattgccaacaacagatgaaaaatgctttagtaccaaagcattcaagaagatgaa 5396210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 5132885 - 5132794
Alignment:
Q  262 ttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatga 353  Q
    |||| ||||||||||| | ||||||||  |||||||||||||||||||| | |||| ||||||| |||||||||||||||| ||| ||||||    
T  5132885 ttcacagggaacaaaatcaattaaggggttggctttgaagttgccaagagctaatgcaaaatgtcttagtactaaagcatttaaggagatga 5132794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 5395716 - 5395846
Alignment:
Q  2 aatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtg 101  Q
    ||||||||||||| |  |||||||||| ||||||||| |||||||||| |||||| | ||||  ||||||||| |||||||||||| | || | || |||    
T  5395716 aatgcatgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaaaagagcccgaggagcgtagcaggttgtggtttaataatgacgtg 5395815  T
Q  102 cttcatgtattgtcagaacatacggtaagaa 132  Q
    ||  ||||||| |||||||| || |||||||    
T  5395816 ctggatgtattatcagaacaaactgtaagaa 5395846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 5183281 - 5183196
Alignment:
Q  2 aatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggt 87  Q
    ||||||||||||| |  |||||||||| ||||||||| |||||||||| |||||| | |||| |||||||||| ||||||||||||    
T  5183281 aatgcatgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaaaagagcctgaggagcgtagcaggttgtggt 5183196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 360
Target Start/End: Original strand, 5446132 - 5446231
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    ||||| |||||| ||||| ||||  ||||||||||||||| ||||| | | | |||| ||||||||||||||||||||||||  | ||||||||||||||    
T  5446132 tttcacagggaaaaaaaggtattttgggactggctttgaaattgcctacaactaatgcaaaatgttttagtactaaagcatttgaaaagatgaagagact 5446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5691441 - 5691390
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatc 52  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5691441 gaatgcatgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc 5691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 5182874 - 5182781
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaa 354  Q
    ||||| |||||||||||||| || ||||| | |||||||| ||||||| | | |||| |||||| |||||||| |||||||||||| |||||||    
T  5182874 tttcacagggaacaaaagctgttgagggattagctttgaaattgccaacagcaaatggaaaatgctttagtaccaaagcattcaaggagatgaa 5182781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5175538 - 5175637
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||| |||||||||| |||||||| |||||||||||| || | ||| ||| |  ||||| |||||||||| |||||||||||| || ||| |||||    
T  5175538 gaatgcataatttgttgcgggatatgggaagagaaatcatttgtaataaaccacgaatggagcctgaggagcgtagcaggttgtggtttcttgaggatgt 5175637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5261476 - 5261346
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagagga-gcttgaggagcgttgcaggttgtggtatcatgacgatg 99  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||| |||||||| |||| || |||| | ||| ||||||||||  |||| || ||||    
T  5261476 gaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtgtgatcaggaggatg 5261378  T
Q  100 tgcttcatgtattgtcagaacatacggtaaga 131  Q
    || || ||||||| ||| |||| || ||||||    
T  5261377 tgattgatgtattatcaaaacaaactgtaaga 5261346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5277365 - 5277464
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||| |||||||||| |||||||| |||||||||||| || | ||| ||| |  ||||| |||||||||| |||||||||||| || ||| |||||    
T  5277365 gaatgcataatttgttgcgggatatgggaagagaaatcatttgtaataaaccacgaatggagcctgaggagcgtagcaggttgtggtttcttgaggatgt 5277464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5432079 - 5432164
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtgg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||| || | ||  ||||| |||| | |||||||| | |||||||||||    
T  5432079 gaatgcatgatttgttgcgggatatgggaagagaaatcatttgtaataatccaccaaaggatcctgaggagcatagcaggttgtgg 5432164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 5432474 - 5432563
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaaga 356  Q
    ||||||||||||||||| ||||| || |||||||||||||||||   | || |||||||| |||||||   ||||| |||||||||||||    
T  5432474 agggaacaaaagctattgagggattgactttgaagttgccaagagatagtgcaaaatgttatagtactgttgcatttaagaagatgaaga 5432563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5075061 - 5075009
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatca 53  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  5075061 gaatgcatgatttgctgcgtgatatgggaagagaaatcattcgtgaaaaatca 5075009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 5147857 - 5147799
Alignment:
Q  295 tttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatga 353  Q
    |||||||||||||| ||| | |  |||||||||||||||||||||||| ||||||||||    
T  5147857 tttgaagttgccaatatctagttcaaaatgttttagtactaaagcatttaagaagatga 5147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 5261077 - 5261007
Alignment:
Q  287 ggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagag 357  Q
    |||||| ||||||||||||| | | | |||| ||||||||||||||||||||||||  | |||||||||||    
T  5261077 ggactgtctttgaagttgcctaaagctaatgcaaaatgttttagtactaaagcatttgaaaagatgaagag 5261007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 5285075 - 5285005
Alignment:
Q  287 ggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagag 357  Q
    |||||| ||||||||||||| | | | |||| ||||||||||||||||||||||||  | |||||||||||    
T  5285075 ggactgtctttgaagttgcctaaagctaatgcaaaatgttttagtactaaagcatttgaaaagatgaagag 5285005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 5175928 - 5176017
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaaga 356  Q
    |||||||||||||| || ||||| || |||||||||||||||||   | ||  ||||||| |||||||||||||||  |||| |||||||    
T  5175928 agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaaga 5176017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 5277755 - 5277844
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaaga 356  Q
    |||||||||||||| || ||||| || |||||||||||||||||   | ||  ||||||| |||||||||||||||  |||| |||||||    
T  5277755 agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaaga 5277844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5285475 - 5285364
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagagga-gcttgaggagcgttgcaggttgtggtatcatgacgatg 99  Q
    ||||||||| |||| ||||||||||||| |||| |||  |||||||| |||||||| |||| || |||| | ||| |||||||||||||||  || ||||    
T  5285475 gaatgcatggtttgctgcgagatatgggaagaggaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatg 5285377  T
Q  100 tgcttcatgtatt 112  Q
    || || |||||||    
T  5285376 tgattgatgtatt 5285364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5148289 - 5148234
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcacca 56  Q
    |||||||||||||||||||||| ||||  ||||||||||| || ||| ||||||||    
T  5148289 gaatgcatgatttgttgcgagacatggcaagagaaatcatacgcgaggaatcacca 5148234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 5342693 - 5342735
Alignment:
Q  263 tcaaagggaacaaaagctattaagggactggctttgaagttgc 305  Q
    |||||||||||| ||||| || |||||||||||||||||||||    
T  5342693 tcaaagggaacacaagctgttgagggactggctttgaagttgc 5342735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 352
Target Start/End: Complemental strand, 5691101 - 5691013
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatg 352  Q
    ||||| ||||||||||||   || ||||||||  |||||||||||||||| | |||| | ||||||||| |||| |||||||  ||||||||    
T  5691101 tttcatagggaacaaaag---ttgagggactgagtttgaagttgccaagagctaatgtacaatgttttaatactgaagcatttgagaagatg 5691013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 4125768 - 4125633
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||| |||||| ||| | ||||||||||||||||| ||||||     
T  4125768 atgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtatcatgaggatgtga 4125669  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttcat 138  Q
    || || |||||||||||||||||||||||| |||||    
T  4125668 ttgatatattgtcagaacatacggtaagaatttcat 4125633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 4322430 - 4322295
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||  ||||| |||||| ||| | |||||||||| |||||| |||||||    
T  4322430 atgcatgatttgctgcgagatatgggaagggaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgatgatgtgc 4322331  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttcat 138  Q
    || ||||||||||||||||||| |||||||||||||    
T  4322330 ttgatgtattgtcagaacatactgtaagaacttcat 4322295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 4334226 - 4334359
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||  ||||| |||||| ||| | |||||||||| |||||| |||||||    
T  4334226 atgcatgatttgcttcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgaggatgtgc 4334325  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttc 136  Q
    || ||||||||||||||||||| |||||||||||    
T  4334326 ttgatgtattgtcagaacatactgtaagaacttc 4334359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 4351903 - 4352038
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||| | |||||||||| ||| |  |||||||    
T  4351903 atgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaaaggagcctgaggaacgtagtaggttgtggtttcacggggatgtgc 4352002  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttcat 138  Q
    || ||||||||||| ||||||| |||||||||||||    
T  4352003 ttgatgtattgtcaaaacatactgtaagaacttcat 4352038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 4343615 - 4343764
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||| | | | |||||||||| |||||| || ||||    
T  4343615 atgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcgccaaaggagcctgaggaacatagtaggttgtggtttcatgaagacgtgc 4343714  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttcattttctttatttttt 152  Q
    || |||| |||| ||||||||| |||||| || ||| | |||||||||||    
T  4343715 ttgatgtcttgttagaacatactgtaagatctacatatactttatttttt 4343764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 4359084 - 4359219
Alignment:
Q  3 atgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgtgc 102  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||| |||||| | | | ||| |||||| |||||| ||||||     
T  4359084 atgcatgatttgctccgagatatgggaagagaaatcattcgtgagaaatcaccaaaggagcctgaggaacatagtaggctgtggtttcatgaggatgtga 4359183  T
Q  103 ttcatgtattgtcagaacatacggtaagaacttcat 138  Q
    || |||| |||| ||||||||| |||||||||||||    
T  4359184 ttgatgtcttgttagaacataccgtaagaacttcat 4359219  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4135112 - 4135013
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||| | ||||||||||| ||||| ||||| ||  ||||||||||| || | || ||| ||||| | ||||| |||| |||||| |||||    
T  4135112 gaatgcatgatttgctacgagatatgggaagagagatcatccgacagaaatcaccaaagaaactcgagaagcgtagtaggttatggtttcatgaggatgt 4135013  T

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Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 36215222 - 36215091
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| | || | || ||    
T  36215222 gaatgcatgatttgctgcgagatatgggaagagagatcattcgtgagaaatcaccaaaggagcttgaggagcgtagcaggttgtggtttaataaggacgt 36215123  T
Q  101 gcttcatgtattgtcagaacatacggtaagaa 132  Q
    |  | ||||||| |||||||| || |||||||    
T  36215122 ggctgatgtattatcagaacaaactgtaagaa 36215091  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 36214819 - 36214726
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    |||||||||||||| || ||||  |||||||||| ||||||||| | |||| |||| | ||||||||||||||||| ||||||||||| |||||    
T  36214819 agggaacaaaagctgttgagggtttggctttgaaattgccaagaacaaatggaaaacgctttagtactaaagcatttaagaagatgaaaagact 36214726  T

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Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8876475 - 8876563
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtat 89  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||| | |||||||||| ||||||||||||||    
T  8876475 gaatgcatgatttgttgacagatatgggaagagaaatcattcgtgagaaatcaccaaaggatcctgaggagcgtagcaggttgtggtat 8876563  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 8876923 - 8877016
Alignment:
Q  267 agggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    |||||||||||| | || |||| || ||| |||||||||||| |    ||| |||| ||||||||||||||||||| |||||||||||||||||    
T  8876923 agggaacaaaagttgttgagggtcttgctctgaagttgccaatagatgatgcaaaacgttttagtactaaagcatttaagaagatgaagagact 8877016  T

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Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9998 - 9890
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    ||||||||||||| || ||||||||||| || |||||||||||||| |||||||||  ||| | |||||| ||| | ||||| |||| ||| || |||||    
T  9998 gaatgcatgatttattacgagatatgggaagggaaatcattcgtgaaaaatcaccaagggatcctgaggaccgtagtaggttatggtttcaagaggatgt 9899  T
Q  101 gcttcatgt 109  Q
    |||| ||||    
T  9898 gcttaatgt 9890  T

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Target: scaffold0294; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 360
Target Start/End: Complemental strand, 9637 - 9538
Alignment:
Q  261 tttcaaagggaacaaaagctattaagggactggctttgaagttgccaagatccaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact 360  Q
    ||||| |||||||||||||| || ||||||| |||||||||||||||| | | | |  ||||||||||||| || || ||||  |||||||| |||||||    
T  9637 tttcatagggaacaaaagctgttgagggactagctttgaagttgccaataactagttcaaaatgttttagtgctgaatcatttgagaagatggagagact 9538  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 3399774 - 3399720
Alignment:
Q  81 ttgtggtatcatgacgatgtgcttcatgtattgtcagaacatacggtaagaactt 135  Q
    ||||||| ||||||||||||||| |||||||||||| || | || ||||||||||    
T  3399774 ttgtggtttcatgacgatgtgctgcatgtattgtcaaaaaaaaccgtaagaactt 3399720  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22585651 - 22585521
Alignment:
Q  1 gaatgcatgatttgttgcgagatatgggtagagaaatcattcgtgagaaatcaccagaggagcttgaggagcgttgcaggttgtggtatcatgacgatgt 100  Q
    |||||||||||||| ||||||||||||| |||| |||  ||| |||| |||||||| ||   | |||| ||||| ||||||||| |||||  || |||||    
T  22585651 gaatgcatgatttgctgcgagatatgggaagaggaattgttcttgaggaatcaccaaagagtcctgagaagcgtagcaggttgttgtatccggaggatgt 22585552  T
Q  101 gcttcatgtattgtcagaacatacggtaaga 131  Q
    | || | ||||| ||| |||| || ||||||    
T  22585551 gattgacgtattatcaaaacaaactgtaaga 22585521  T

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