View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2282_low_13 (Length: 249)

Name: NF2282_low_13
Description: NF2282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2282_low_13
NF2282_low_13
[»] chr8 (27 HSPs)
chr8 (2-123)||(33057463-33057583)
chr8 (124-241)||(33057611-33057728)
chr8 (183-227)||(8587180-8587224)
chr8 (124-223)||(17006928-17007027)
chr8 (124-223)||(17570220-17570319)
chr8 (124-227)||(24691989-24692091)
chr8 (183-227)||(28463621-28463665)
chr8 (168-227)||(12343150-12343209)
chr8 (168-227)||(43199364-43199423)
chr8 (124-238)||(8587187-8587301)
chr8 (124-222)||(13578874-13578972)
chr8 (182-220)||(15688047-15688085)
chr8 (182-223)||(28999123-28999164)
chr8 (168-240)||(54609-54681)
chr8 (186-222)||(17006926-17006962)
chr8 (186-222)||(17570285-17570321)
chr8 (182-222)||(24692053-24692093)
chr8 (168-227)||(2890172-2890231)
chr8 (168-227)||(6552716-6552775)
chr8 (168-227)||(7785788-7785847)
chr8 (168-227)||(33289271-33289330)
chr8 (168-227)||(39571213-39571272)
chr8 (168-238)||(7012232-7012302)
chr8 (168-222)||(15888367-15888421)
chr8 (168-237)||(31654674-31654743)
chr8 (191-227)||(12763738-12763774)
chr8 (186-218)||(31758706-31758738)
[»] chr1 (27 HSPs)
chr1 (124-227)||(11897071-11897174)
chr1 (1-108)||(1455875-1455978)
chr1 (124-227)||(16448118-16448221)
chr1 (182-240)||(16448183-16448241)
chr1 (182-227)||(11897064-11897109)
chr1 (168-227)||(17556814-17556873)
chr1 (122-222)||(1598397-1598495)
chr1 (168-227)||(9981708-9981767)
chr1 (168-227)||(11795994-11796053)
chr1 (168-227)||(14984898-14984957)
chr1 (182-225)||(21537944-21537987)
chr1 (168-227)||(25694380-25694439)
chr1 (168-227)||(27159368-27159427)
chr1 (168-227)||(31842805-31842864)
chr1 (124-227)||(37552158-37552261)
chr1 (168-227)||(39401976-39402035)
chr1 (168-227)||(44668103-44668162)
chr1 (168-227)||(44955216-44955275)
chr1 (124-222)||(21537884-21537982)
chr1 (168-222)||(34042757-34042811)
chr1 (168-222)||(47216714-47216768)
chr1 (190-227)||(17556762-17556799)
chr1 (182-223)||(47588351-47588392)
chr1 (182-227)||(47777491-47777536)
chr1 (193-225)||(11989793-11989825)
chr1 (183-227)||(12483638-12483682)
chr1 (191-227)||(47588421-47588457)
[»] chr7 (22 HSPs)
chr7 (124-227)||(7269415-7269518)
chr7 (168-227)||(9575470-9575529)
chr7 (182-227)||(7269480-7269525)
chr7 (1-98)||(8143742-8143838)
chr7 (124-225)||(36033238-36033339)
chr7 (168-237)||(38441521-38441590)
chr7 (168-227)||(1738457-1738516)
chr7 (168-227)||(7240810-7240869)
chr7 (168-227)||(7482286-7482345)
chr7 (168-227)||(9268817-9268876)
chr7 (168-227)||(38063923-38063982)
chr7 (184-227)||(40840129-40840172)
chr7 (168-227)||(46840921-46840980)
chr7 (180-227)||(46877663-46877710)
chr7 (168-222)||(1565744-1565798)
chr7 (168-222)||(31319414-31319468)
chr7 (173-222)||(94333-94382)
chr7 (173-238)||(4790314-4790379)
chr7 (182-227)||(22285774-22285819)
chr7 (182-227)||(33418451-33418496)
chr7 (182-227)||(36016206-36016251)
chr7 (173-222)||(36583461-36583510)
[»] chr4 (24 HSPs)
chr4 (124-225)||(17344230-17344331)
chr4 (182-227)||(1716311-1716356)
chr4 (168-227)||(3993037-3993096)
chr4 (168-227)||(47838627-47838686)
chr4 (168-227)||(51894592-51894651)
chr4 (173-227)||(4780361-4780415)
chr4 (168-222)||(45478153-45478207)
chr4 (124-222)||(50430433-50430531)
chr4 (182-227)||(41469776-41469821)
chr4 (183-223)||(50430494-50430534)
chr4 (168-227)||(3422121-3422180)
chr4 (168-227)||(6121903-6121962)
chr4 (168-227)||(40913199-40913258)
chr4 (183-218)||(41594673-41594708)
chr4 (168-227)||(42797793-42797852)
chr4 (168-227)||(47833672-47833731)
chr4 (168-222)||(7579371-7579425)
chr4 (168-237)||(43900610-43900679)
chr4 (190-227)||(45725939-45725976)
chr4 (183-227)||(5986952-5986996)
chr4 (183-227)||(17236864-17236908)
chr4 (182-222)||(17344228-17344268)
chr4 (183-227)||(41615686-41615730)
chr4 (182-218)||(51545531-51545567)
[»] scaffold0063 (1 HSPs)
scaffold0063 (149-225)||(53353-53429)
[»] chr2 (21 HSPs)
chr2 (126-222)||(16734802-16734898)
chr2 (182-227)||(16734793-16734838)
chr2 (182-227)||(36688892-36688937)
chr2 (183-238)||(12170398-12170453)
chr2 (173-227)||(41492906-41492960)
chr2 (168-240)||(38917519-38917591)
chr2 (168-227)||(3055619-3055678)
chr2 (183-222)||(4553086-4553125)
chr2 (168-227)||(6648529-6648588)
chr2 (168-227)||(9047765-9047824)
chr2 (168-227)||(12337947-12338006)
chr2 (168-227)||(13197720-13197779)
chr2 (168-227)||(15372287-15372346)
chr2 (168-227)||(15896903-15896962)
chr2 (168-227)||(16243793-16243852)
chr2 (183-222)||(23227348-23227387)
chr2 (168-227)||(37990023-37990082)
chr2 (168-227)||(41478649-41478708)
chr2 (168-227)||(44397608-44397667)
chr2 (168-227)||(44398747-44398806)
chr2 (168-240)||(13344545-13344617)
[»] chr5 (15 HSPs)
chr5 (168-227)||(36595784-36595843)
chr5 (134-222)||(2366353-2366441)
chr5 (168-240)||(17025685-17025757)
chr5 (168-227)||(9395411-9395470)
chr5 (168-227)||(23360003-23360062)
chr5 (168-227)||(36563548-36563607)
chr5 (168-227)||(41989417-41989476)
chr5 (184-218)||(3346912-3346946)
chr5 (173-227)||(6126890-6126944)
chr5 (168-222)||(11795229-11795283)
chr5 (182-227)||(4444035-4444080)
chr5 (182-227)||(13103099-13103144)
chr5 (124-240)||(37641970-37642087)
chr5 (189-237)||(9152157-9152205)
chr5 (182-222)||(13033126-13033166)
[»] chr3 (27 HSPs)
chr3 (166-227)||(42170356-42170417)
chr3 (175-227)||(9027152-9027204)
chr3 (168-227)||(4238655-4238714)
chr3 (168-227)||(38964453-38964512)
chr3 (168-222)||(33942947-33943001)
chr3 (173-214)||(8092654-8092695)
chr3 (168-240)||(37508982-37509054)
chr3 (168-240)||(49823378-49823450)
chr3 (168-227)||(8817396-8817455)
chr3 (168-227)||(9111504-9111563)
chr3 (168-227)||(10298040-10298099)
chr3 (168-227)||(17653773-17653832)
chr3 (168-227)||(19557062-19557121)
chr3 (168-227)||(22721992-22722051)
chr3 (168-227)||(34080040-34080099)
chr3 (168-227)||(40691006-40691065)
chr3 (168-227)||(48340458-48340517)
chr3 (168-222)||(44785411-44785465)
chr3 (182-240)||(46208105-46208163)
chr3 (168-241)||(8437486-8437559)
chr3 (182-227)||(21295336-21295381)
chr3 (177-222)||(26019495-26019540)
chr3 (182-227)||(42507365-42507410)
chr3 (82-122)||(465359-465399)
chr3 (182-218)||(14848276-14848312)
chr3 (191-227)||(42170430-42170466)
chr3 (191-227)||(51406683-51406719)
[»] chr6 (19 HSPs)
chr6 (124-227)||(3788053-3788157)
chr6 (124-222)||(7596992-7597090)
chr6 (180-225)||(7597050-7597095)
chr6 (168-240)||(13853590-13853662)
chr6 (168-240)||(35030998-35031070)
chr6 (168-227)||(2830396-2830455)
chr6 (168-227)||(6330176-6330235)
chr6 (168-227)||(8099591-8099650)
chr6 (168-227)||(8382979-8383038)
chr6 (168-227)||(8417803-8417862)
chr6 (168-227)||(9644757-9644816)
chr6 (168-227)||(9650774-9650833)
chr6 (168-227)||(11572155-11572214)
chr6 (182-225)||(14236698-14236741)
chr6 (168-227)||(22896523-22896582)
chr6 (168-227)||(26602384-26602443)
chr6 (182-222)||(6549957-6549997)
chr6 (191-227)||(8417877-8417913)
chr6 (182-222)||(28747149-28747189)
[»] scaffold1707 (1 HSPs)
scaffold1707 (168-222)||(1396-1450)
[»] scaffold0650 (1 HSPs)
scaffold0650 (173-221)||(1-49)
[»] scaffold0009 (1 HSPs)
scaffold0009 (183-227)||(49581-49625)


Alignment Details
Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33057463 - 33057583
Alignment:
Q  2 ccatattttatatttttcaggatttttgcccactcaatcacatttgagttcattttcgctgatgcggtagtgcagatgtaacatatattattttatttta 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33057463 ccatattttatatttttcaagatttttgcccactcaatcacatttgagttcattttcgctgatgcggtagtgcaga-gtaacatatattatattatttta 33057561  T
Q  102 ttatgcagaaaatgagtgaaat 123  Q
    ||||||||||||||||||||||    
T  33057562 ttatgcagaaaatgagtgaaat 33057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 33057611 - 33057728
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  33057611 tttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaaactttctcttataaataa 33057710  T
Q  224 gacccgacgaagtataat 241  Q
    |||| || | ||||||||    
T  33057711 gaccggatggagtataat 33057728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 8587224 - 8587180
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggacc 8587180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 17006928 - 17007027
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||||||||| |||| ||| || ||| | | |||| | |||| | ||||||||||||||| ||||| ||| ||||||||||||||||    
T  17006928 tttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaataa 17007027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 17570319 - 17570220
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||||||||| |||| ||| || ||| | | |||| | |||| | ||||||||||||||| ||||| ||| ||||||||||||||||    
T  17570319 tttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaataa 17570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 24692091 - 24691989
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| |||||| |||||| |||| ||| |||||| ||| |||| |||||||| |||| ||||||||||||||||| || ||||| ||| |||||     
T  24692091 tttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaa-ttttaaccagatatatcaacttttgttgacccaaatttcttttaaaaatag 24691993  T
Q  224 gacc 227  Q
    ||||    
T  24691992 gacc 24691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 28463665 - 28463621
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggacc 28463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 12343209 - 12343150
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||    
T  12343209 tgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 12343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 43199423 - 43199364
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||    
T  43199423 tgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 43199364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 8587187 - 8587301
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| |||||| |||||| |||| ||| |||||    | | || |||||||  ||||||||||||||| |||||  || ||||||||||||||||    
T  8587187 tttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaataa 8587286  T
Q  224 gacccgacgaagtat 238  Q
    |||| || |||||||    
T  8587287 gaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 13578874 - 13578972
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||| ||| || ||||||||||| |   |||||  ||| |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  13578874 tttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 15688085 - 15688047
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaa 220  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15688085 gatacatcaacttttgttgacccaactttctcttataaa 15688047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 28999123 - 28999164
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  28999123 gatacatcaatttttgttgaccaaactttcttttataaataa 28999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 54681 - 54609
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  54681 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtataa 54609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 17006962 - 17006926
Alignment:
Q  186 catcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||| ||||||||||||||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaata 17006926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 17570285 - 17570321
Alignment:
Q  186 catcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||| ||||||||||||||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaata 17570321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 24692053 - 24692093
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  24692053 gatacatcaacttttgttgacctaactttttcttataaata 24692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 2890231 - 2890172
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  2890231 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 2890172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 6552716 - 6552775
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  6552716 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6552775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 7785847 - 7785788
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  7785847 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7785788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 33289330 - 33289271
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  33289330 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 33289271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 39571272 - 39571213
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  39571272 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 39571213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 7012232 - 7012302
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtat 238  Q
    |||| |||||||  |||||||||||||||||||| | ||  |||||||||||||| |||| || |||||||    
T  7012232 tgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagtat 7012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 15888421 - 15888367
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  15888421 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 15888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 31654674 - 31654743
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagta 237  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||| ||||||||| |||| || ||||||    
T  31654674 tgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 12763738 - 12763774
Alignment:
Q  191 acttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  12763738 acttttgttgacctaaatttctcttataaataagacc 12763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 31758706 - 31758738
Alignment:
Q  186 catcaacttttgttgaccaaactttctcttata 218  Q
    |||||||||||||||||| ||||||||||||||    
T  31758706 catcaacttttgttgacctaactttctcttata 31758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 11897071 - 11897174
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| |||||| |||||| |||| ||| |||||| ||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||||     
T  11897071 tttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaatag 11897170  T
Q  224 gacc 227  Q
    ||||    
T  11897171 gacc 11897174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1455875 - 1455978
Alignment:
Q  1 cccatattttatatttttcaggatttttgcccactcaatcacatttgagttcattttcgctgatgcggtagtgcagatgtaacatatattattttatttt 100  Q
    |||||||||||||||||||||||||||| ||    ||| |||||||||| ||||||||||||||  |  | ||| ||||| | ||||||||| |||||||    
T  1455875 cccatattttatatttttcaggatttttccc----caaccacatttgagctcattttcgctgatatgacactgctgatgtgaaatatattatattatttt 1455970  T
Q  101 attatgca 108  Q
    ||||||||    
T  1455971 attatgca 1455978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 16448221 - 16448118
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||||||||| |||| ||| |||||| | | |||| ||| |||| ||||||| |||||||||||||| ||  ||| | |||||||||    
T  16448221 tttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcccctataaataa 16448122  T
Q  224 gacc 227  Q
    ||||    
T  16448121 gacc 16448118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 16448183 - 16448241
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| || | |||||||    
T  16448183 gatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtataa 16448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 11897109 - 11897064
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  11897109 gatacatcaacttttgttgacctaactttctcttataaataggacc 11897064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 17556814 - 17556873
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| || ||||||||||||||| ||||    
T  17556814 tgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggacc 17556873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 1598495 - 1598397
Alignment:
Q  122 attttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaat 221  Q
    ||||||||||| |||||||  ||||||||||||| |||||  | | |||| |||||| |  ||||||||| |||||||||||| | ||||||||||||||    
T  1598495 attttataagaaaaagttgaatcaataaaaattgatgtatttggactgaatttttaa-catatacatcaatttttgttgaccata-tttctcttataaat 1598398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9981708 - 9981767
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9981708 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9981767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 11795994 - 11796053
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  11795994 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 11796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 14984898 - 14984957
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  14984898 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 14984957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 21537944 - 21537987
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataaga 225  Q
    |||||||||||||||||||||  || ||||||||||||||||||    
T  21537944 gatacatcaacttttgttgactcaattttctcttataaataaga 21537987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 25694380 - 25694439
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  25694380 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 25694439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 27159427 - 27159368
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  27159427 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 27159368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 31842864 - 31842805
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  31842864 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 31842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 37552158 - 37552261
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||| ||||| || | ||  |||||| | | |||| |||||||| |||||||  | ||||||||||| || |||||||||||||||     
T  37552158 tttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaatag 37552257  T
Q  224 gacc 227  Q
    ||||    
T  37552258 gacc 37552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 39402035 - 39401976
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  39402035 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 39401976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 44668162 - 44668103
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  44668162 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 44668103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 44955275 - 44955216
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  44955275 tgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggacc 44955216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 21537982 - 21537884
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||| ||| ||| ||||| |||| ||| |||||| ||| | |||||| || | |||||||||||||| ||||||  |||| |||||| ||||||    
T  21537982 tttataagagaaaattgagtcaacaaaagttgatgtatctgaactaaaatttgaatcagatacatcaactttcgttgactcaactctctcttgtaaata 21537884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 34042757 - 34042811
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  34042757 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 34042811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 47216768 - 47216714
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  47216768 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 47216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 17556799 - 17556762
Alignment:
Q  190 aacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17556799 aacttttgttgacctaactttctcttataaataggacc 17556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 47588392 - 47588351
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    |||||||||||||||||||||| ||  |||||||||||||||    
T  47588392 gatacatcaacttttgttgacccaaaattctcttataaataa 47588351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 47777536 - 47777491
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  47777536 gatacatcaacttttgttgacccaaaattctcttataaataggacc 47777491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 11989825 - 11989793
Alignment:
Q  193 ttttgttgaccaaactttctcttataaataaga 225  Q
    ||||||||||| |||||||||||||||||||||    
T  11989825 ttttgttgacccaactttctcttataaataaga 11989793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 12483682 - 12483638
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggacc 12483638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 47588421 - 47588457
Alignment:
Q  191 acttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  47588421 acttttgttgacctaaatttctcttataaataagacc 47588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 7269518 - 7269415
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||||||||| |||||||| ||||||  || |||| |||||||| ||| |||||||||||||| ||| ||||||||||||||||||     
T  7269518 tttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaatag 7269419  T
Q  224 gacc 227  Q
    ||||    
T  7269418 gacc 7269415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9575470 - 9575529
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||| |||||||||||||||||||||||||||||| ||||    
T  9575470 tgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggacc 9575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 7269480 - 7269525
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||    
T  7269480 gatacatcaatttttgttgacccaactttttcttataaataagacc 7269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8143838 - 8143742
Alignment:
Q  1 cccatattttatatttttcaggatttttgcccactcaatcacatttgagttcattttcgctgatgcggtagtgcagatgtaacatatattattttatt 98  Q
    ||||||||||| |||||| ||||||||| ||| ||| | |||||||||||||||||| | ||||| |||||||  || || | ||||||||| |||||    
T  8143838 cccatattttacattttttaggatttttcccc-ctctaccacatttgagttcatttttggtgatgtggtagtgttgaggtgaaatatattatattatt 8143742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 36033339 - 36033238
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||| | |||||| || ||| |||||||  ||| || ||| |||| |||| | | |||||||||||||||||||||| || ||| ||||||||||||    
T  36033339 tttataaaataaagtttggccaacaaaaatttatgtgtctgaattgaatttttgatcagatacatcaacttttgttgacctaaatttatcttataaataa 36033240  T
Q  224 ga 225  Q
    ||    
T  36033239 ga 36033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 38441521 - 38441590
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagta 237  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || ||||||    
T  38441521 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 1738516 - 1738457
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  1738516 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 1738457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 7240810 - 7240869
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  7240810 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7240869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 7482286 - 7482345
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  7482286 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 7482345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9268817 - 9268876
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9268817 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9268876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 38063982 - 38063923
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  38063982 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 38063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 40840172 - 40840129
Alignment:
Q  184 tacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggacc 40840129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 46840921 - 46840980
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  46840921 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 46840980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 46877663 - 46877710
Alignment:
Q  180 cggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||| |||||||||||||| |||||||||||||| ||| ||||    
T  46877663 cggatacattaacttttgttgacccaactttctcttatatataggacc 46877710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 1565798 - 1565744
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  1565798 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 31319468 - 31319414
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  31319468 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 31319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 94382 - 94333
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  94382 ttttaactagatacatcaacttttgttgacccaaaattctcttataaata 94333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 4790314 - 4790379
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtat 238  Q
    |||||||  ||||||||||||||| |||||| ||  |||||||||||||| |||| || |||||||    
T  4790314 ttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 22285774 - 22285819
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  22285774 gatacatcaacttttgttgacccaaaattctcttataaataggacc 22285819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 33418451 - 33418496
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  33418451 gatacatcaacttttgttgacccaaaattctcttataaataggacc 33418496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 36016251 - 36016206
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  36016251 gatacatcaacttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 36583461 - 36583510
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  36583461 ttttaactagatacatcaacttttgttgacccaaaattctcttataaata 36583510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 225
Target Start/End: Original strand, 17344230 - 17344331
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||| ||||||   |||| |||| ||| |||||| ||| |||| |||||| |||||||||||||||||||||| | || ||||||||||||||||    
T  17344230 tttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttctcttataaataa 17344329  T
Q  224 ga 225  Q
    ||    
T  17344330 ga 17344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 1716356 - 1716311
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||    
T  1716356 gatacatcaacttttgttgaccaaattatctcttataaataagacc 1716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 3993037 - 3993096
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||||||||    
T  3993037 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagacc 3993096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 47838686 - 47838627
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||    
T  47838686 tgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 47838627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 51894651 - 51894592
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||| |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  51894651 tgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggacc 51894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 4780361 - 4780415
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||| | ||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  4780361 ttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggacc 4780415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 45478153 - 45478207
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||||||||||||||||||| |||||| |  |||||||||||||||    
T  45478153 tgaatttttaaccggatacatcaacttttattgacccacatttctcttataaata 45478207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 50430531 - 50430433
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||  |||||||||||| |||| ||| |||||  | | |||| |||||||| |||||||||| ||||||||||| || | | |||||||||||    
T  50430531 tttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaata 50430433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 41469821 - 41469776
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||    
T  41469821 gatacatcaacttttgttgaccaaaaattctcttataaataggacc 41469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 50430494 - 50430534
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataa 223  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  50430494 atacatcaacttttgttgacccaacttgctcttataaataa 50430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 3422121 - 3422180
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  3422121 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 3422180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 6121962 - 6121903
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  6121962 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 40913258 - 40913199
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| ||||||| ||||| ||||||||||||||| | || ||||||||||||||| ||||    
T  40913258 tgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggacc 40913199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 41594708 - 41594673
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttata 218  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 42797793 - 42797852
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  42797793 tgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggacc 42797852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 47833672 - 47833731
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  47833672 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 47833731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 7579371 - 7579425
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  7579371 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 7579425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 43900610 - 43900679
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagta 237  Q
    |||| |||||||  |||||||||||||||||| ||| ||  |||||||||||||| |||| || ||||||    
T  43900610 tgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 45725939 - 45725976
Alignment:
Q  190 aacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  45725939 aacttttgttgacgaaactttctcttataaataggacc 45725976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 5986952 - 5986996
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggacc 5986996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 17236864 - 17236908
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||| || ||| ||||||||||| ||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggacc 17236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 17344268 - 17344228
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  17344268 gatacatcaacttttgttgatttaactttctcttataaata 17344228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 41615730 - 41615686
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||| | || ||||||||||||||| ||||    
T  41615730 atacatcaacttttgttgatccaattttctcttataaataggacc 41615686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 51545567 - 51545531
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttata 218  Q
    |||||||||||||||||| |||||||||||| |||||    
T  51545567 gatacatcaacttttgttcaccaaactttctattata 51545531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 53429 - 53353
Alignment:
Q  149 aaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataaga 225  Q
    |||||||||||||| ||| | || |||||||  ||||||||||||||||||  ||||||||||| ||||||||||||    
T  53429 aaaattgttgtatctgaatttaatttttaacgagatacatcaacttttgttatccaaactttcttttataaataaga 53353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 16734802 - 16734898
Alignment:
Q  126 tataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||| |||||| |||||| |||| ||| |||||| | | |||| ||||||||  ||||||||||||||||| ||  ||||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaata 16734898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 16734838 - 16734793
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||||||||||||||||||| || |||||    
T  16734838 gatacatcaacttttgttgaccaaactttctcttatatattagacc 16734793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 36688937 - 36688892
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  36688937 gatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 12170453 - 12170398
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtat 238  Q
    ||||||||||||||||||||| || |||||||||||||||||| | || |||||||    
T  12170453 atacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtat 12170398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 41492960 - 41492906
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||  |||||||||||||||||||||| || ||||||||||||||| ||||    
T  41492960 ttttaactagatacatcaacttttgttgacccaaatttctcttataaataggacc 41492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 38917591 - 38917519
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  38917591 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtataa 38917519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 3055619 - 3055678
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  3055619 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 3055678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 4553086 - 4553125
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  4553086 atacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 6648588 - 6648529
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  6648588 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6648529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 9047824 - 9047765
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9047824 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9047765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 12338006 - 12337947
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  12338006 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 12337947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 13197779 - 13197720
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  13197779 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 13197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 15372287 - 15372346
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  15372287 tgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggacc 15372346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 15896903 - 15896962
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  15896903 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 15896962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 16243852 - 16243793
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  16243852 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 16243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 23227348 - 23227387
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaata 23227387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 37990082 - 37990023
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  37990082 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 37990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 41478708 - 41478649
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  41478708 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 41478649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 44397608 - 44397667
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  44397608 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 44397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 44398747 - 44398806
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  44398747 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 44398806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 13344545 - 13344617
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||| | ||  |||||||||||||| |||| || | |||||||    
T  13344545 tgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtataa 13344617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 36595843 - 36595784
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||| | |||||||||| ||||||||||| |||||||||||||||||||||||    
T  36595843 tgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagacc 36595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 2366441 - 2366353
Alignment:
Q  134 aaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||| ||| ||||||| ||| |||||  | | |||||||||||||  |||||| |||| ||||||||| || |||||||||||||||    
T  2366441 aaagtttggttaataaaagttgatgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaata 2366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 17025685 - 17025757
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  17025685 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtataa 17025757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9395411 - 9395470
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9395411 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9395470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 23360003 - 23360062
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  23360003 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 23360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 36563607 - 36563548
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  36563607 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 36563548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 41989476 - 41989417
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  41989476 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 41989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 3346946 - 3346912
Alignment:
Q  184 tacatcaacttttgttgaccaaactttctcttata 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  3346946 tacatcaacttttgttgacgaaactttctcttata 3346912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6126890 - 6126944
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  6126890 ttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 11795229 - 11795283
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  11795229 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 11795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 4444035 - 4444080
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||| | ||  |||||||||||||||||||    
T  4444035 gatacatcaacttttgttgatctaaaattctcttataaataagacc 4444080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 13103099 - 13103144
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  13103099 gatacatcaacttttgttgacccaaaattctcttataaataggacc 13103144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 37641970 - 37642087
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgt-tgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||| ||| || |||||||||||| ||  |||||  | | |||| |||||||  ||||||||||||||| |||||| ||  ||||||||||||||    
T  37641970 tttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaata 37642069  T
Q  223 agacccgacgaagtataa 240  Q
     |||| || | |||||||    
T  37642070 ggaccggagggagtataa 37642087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 9152157 - 9152205
Alignment:
Q  189 caacttttgttgaccaaactttctcttataaataagacccgacgaagta 237  Q
    ||||||||||||||| ||||||||||||||| ||| ||| || ||||||    
T  9152157 caacttttgttgacccaactttctcttataattaaaaccggaggaagta 9152205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 13033126 - 13033166
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||||||| ||  ||||||||||||||    
T  13033126 gatacatcaacttttgttgacccaaaattctcttataaata 13033166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 42170417 - 42170356
Alignment:
Q  166 agtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||| |||||||| |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  42170417 agtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 9027204 - 9027152
Alignment:
Q  175 ttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||| ||||    
T  9027204 ttaacctgatacatcaacttttgttgacccaactttatcttataaataggacc 9027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 4238655 - 4238714
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||    
T  4238655 tgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 4238714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 38964453 - 38964512
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||||||  |||||||||||||| ||||    
T  38964453 tgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggacc 38964512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 33943001 - 33942947
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| || |||||||||||||||    
T  33943001 tgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaata 33942947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 8092654 - 8092695
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctct 214  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  8092654 ttttaaccagatacatcaacttctgttgaccaaactttctct 8092695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 37508982 - 37509054
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  37508982 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtataa 37509054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 49823450 - 49823378
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  49823450 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtataa 49823378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 8817455 - 8817396
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  8817455 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8817396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 9111563 - 9111504
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9111563 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 10298040 - 10298099
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  10298040 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 10298099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 17653773 - 17653832
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  17653773 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 17653832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 19557121 - 19557062
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  19557121 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 19557062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 22721992 - 22722051
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  22721992 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 22722051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 34080099 - 34080040
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  34080099 tgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggacc 34080040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 40691065 - 40691006
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  40691065 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 40691006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 48340458 - 48340517
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  48340458 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 48340517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 44785465 - 44785411
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  44785465 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 44785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 46208105 - 46208163
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  46208105 gatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtataa 46208163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 8437486 - 8437559
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataat 241  Q
    |||| |||||||  |||||||||||||||||||||  ||  |||||||||||||| |||| || | ||||||||    
T  8437486 tgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtataat 8437559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 21295381 - 21295336
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  21295381 gatacatcaacttttgttgacctaaaattctcttataaataggacc 21295336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 26019540 - 26019495
Alignment:
Q  177 aaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| ||||||| |||||| |||||||||| |||||||||||||||    
T  26019540 aaccagatacataaactttggttgaccaaattttctcttataaata 26019495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 42507410 - 42507365
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  42507410 gatacatcaacttttgttgacccaaaattctcttataaataggacc 42507365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 465399 - 465359
Alignment:
Q  82 acatatattattttattttattatgcagaaaatgagtgaaa 122  Q
    ||||||||||| ||||||||||||| | |||||||||||||    
T  465399 acatatattatattattttattatgtaaaaaatgagtgaaa 465359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 14848312 - 14848276
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttata 218  Q
    |||||||||||||||||||||| || |||||||||||    
T  14848312 gatacatcaacttttgttgacccaattttctcttata 14848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 42170430 - 42170466
Alignment:
Q  191 acttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  42170430 acttttgttgacctaaatttctcttataaataagacc 42170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 51406719 - 51406683
Alignment:
Q  191 acttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  51406719 acttttgttgacctaaatttctcttataaataagacc 51406683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 3788053 - 3788157
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaatt-gttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||| |||||||||||||| |||||| |||| ||  | | |||| | |||||   ||||||||||||||||||||| || ||| |||||||||||    
T  3788053 tttataagagaaagttgggtcaatcaaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaata 3788152  T
Q  223 agacc 227  Q
    |||||    
T  3788153 agacc 3788157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 7597090 - 7596992
Alignment:
Q  124 tttataagacaaagttgggtcaataaaaattgttgtatccgaagtgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    ||||||||| ||||||| || || |||| ||| |||||||||| |||| |||||||   |||||||||||||| |||||  || |||||| ||||||||    
T  7597090 tttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaata 7596992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 7597050 - 7597095
Alignment:
Q  180 cggatacatcaacttttgttgaccaaactttctcttataaataaga 225  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||    
T  7597050 cggatacatcaacttttgttaacacaactttctcttataaataaga 7597095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 13853662 - 13853590
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| |||| || | |||||||    
T  13853662 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtataa 13853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 35031070 - 35030998
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacccgacgaagtataa 240  Q
    |||| |||||||  |||||||||| ||||||||||| ||  |||||||||||||| |||| || |||||||||    
T  35031070 tgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggaagtataa 35030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 2830396 - 2830455
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  2830396 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 2830455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 6330176 - 6330235
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  6330176 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6330235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 8099591 - 8099650
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  8099591 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 8383038 - 8382979
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  8383038 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8382979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 8417862 - 8417803
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  8417862 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 8417803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9644757 - 9644816
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9644757 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9644816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 9650774 - 9650833
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  9650774 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 9650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 11572214 - 11572155
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  11572214 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 11572155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 14236698 - 14236741
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaataaga 225  Q
    |||||||||||||||||||||  |||||||||||||||| ||||    
T  14236698 gatacatcaacttttgttgactcaactttctcttataaacaaga 14236741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 22896523 - 22896582
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  ||||||||||||||||||||| |||  |||||||||||||| ||||    
T  22896523 tgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggacc 22896582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 26602384 - 26602443
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    |||| |||||||  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  26602384 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 26602443  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 6549957 - 6549997
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||| |||||| | |||||||||||||    
T  6549957 gatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 8417877 - 8417913
Alignment:
Q  191 acttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||| || ||||||||||||||||||||    
T  8417877 acttttgttgacctaaatttctcttataaataagacc 8417913  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 28747189 - 28747149
Alignment:
Q  182 gatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||||||||||||||||||||| ||  ||||||||||||||    
T  28747189 gatacatcaacttttgttgacccaaaattctcttataaata 28747149  T

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Target: scaffold1707 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 1396 - 1450
Alignment:
Q  168 tgaaattttaaccggatacatcaacttttgttgaccaaactttctcttataaata 222  Q
    |||| |||||||  |||||||||||||||||||||| ||  ||||||||||||||    
T  1396 tgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 1450  T

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Target: scaffold0650 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 49 - 1
Alignment:
Q  173 ttttaaccggatacatcaacttttgttgaccaaactttctcttataaat 221  Q
    ||||||||  ||||||||||||||||||||   ||||||||||||||||    
T  49 ttttaaccaaatacatcaacttttgttgactcgactttctcttataaat 1  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 49581 - 49625
Alignment:
Q  183 atacatcaacttttgttgaccaaactttctcttataaataagacc 227  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggacc 49625  T

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