View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2282_low_4 (Length: 445)
Name: NF2282_low_4
Description: NF2282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2282_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 21 - 429
Target Start/End: Complemental strand, 18677743 - 18677338
Alignment:
| Q |
21 |
acaacactttcatcaacaccaaatttaagaaacgaagttttcccttctctatggttaaacccaactcttccaccatgaaacttagaagaagttgagcaag |
120 |
Q |
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| T |
18677743 |
acaacactttcatcaacaccaaatttaagaaacgaagttttcccttctctatggttaaacccaactcttccaccatgaagcttagaag---ttgagcaag |
18677647 |
T |
|
| Q |
121 |
caaaactcgatattgaacaaccctttgagactctttgaagggaaaaggaagagcaagtgcgtaagagaggttggaaagatagaggtttatgcttttgttt |
220 |
Q |
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| T |
18677646 |
caaaacttgatattgaacaaccctttgagaccctttgaagggaaaaggaagagcgagtgcgtaagagaggttggaaagatagaggtttatgcttttgttt |
18677547 |
T |
|
| Q |
221 |
catgggagtgaatggagagaaaacgggaatggaagccattgaaagaggagagagggggtgtgaagaggaaggatggggggtgtgaagattgaagaggcag |
320 |
Q |
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| T |
18677546 |
catgggagtgaatggagagaaaacgggaatggaagccattgaaagaggagagagggggtgtgaagaggaatgagggggggtgtgaagattgaagaggcag |
18677447 |
T |
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| Q |
321 |
aagatgaggggattatgaaaatgatattcgcatatatacgtacgagtgtgaatgagaacaaatgaaagtagggacttgtgatgagagtgatgatagatag |
420 |
Q |
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| T |
18677446 |
aagatgaggggattatgaaaatgatattcgcatatatacgtccgagtgtgaatgagaacaaatgaaagtagggacttgtgatgagagtgatgatagatag |
18677347 |
T |
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| Q |
421 |
atatggttg |
429 |
Q |
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| T |
18677346 |
atatggttg |
18677338 |
T |
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