View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2283_low_9 (Length: 251)
Name: NF2283_low_9
Description: NF2283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2283_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 35007644 - 35007433
Alignment:
| Q |
1 |
cctcacatgtaggaacataacttaaggaactagcctgatggtcactttcttcttgaatgattcttacagcattattaagcctcacttgcaagtattggct |
100 |
Q |
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| T |
35007644 |
cctcacatgtaggaacataacttaaggaactagcccgatggtcactttcttcttgaatgattcttacagcattattaagcctcacttgcaagtattggct |
35007545 |
T |
|
| Q |
101 |
taatttcgaacagaatgaaacatttattttcctgagagcataaaagcacatatcaaaattaaatgctgatatggcattaatggtgaaattaggtgacaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35007544 |
taatttcgaacagaatgaaacatttattttcctgagagcataaaagcatatatcaaaattaaatgctgatatggcattaatggtgaaattaggtgacaag |
35007445 |
T |
|
| Q |
201 |
agtctcaagact |
212 |
Q |
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|||||||||||| |
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| T |
35007444 |
agtctcaagact |
35007433 |
T |
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