View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2284_high_7 (Length: 344)
Name: NF2284_high_7
Description: NF2284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2284_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 43742444 - 43742148
Alignment:
| Q |
18 |
gagttaattgacttaattgaaaaattgggttgggttgaaatcatatgtagaaaatcttaggcaattaatgaggaaaatcaaaatatgaccataaattagt |
117 |
Q |
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| T |
43742444 |
gagttaattgacttaattgaaaaattggattgggttgaaatcatatgtagaaaatcttaggcaattaatgaggaaaatcaaaatatgaccataaattagt |
43742345 |
T |
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| Q |
118 |
ctaaatttccagttttcatgacatnnnnnnngatgtagaggaattggcgtttaagatcggaagacaatgacttagtgggaaaggattagaaaataaggga |
217 |
Q |
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| T |
43742344 |
ctaaatttccagttttcatgacatgaaaaaagatgtagaggaattggcgtttaagatcggaagacaatgacttagtgggaaaggattagaaaataaggga |
43742245 |
T |
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| Q |
218 |
agagaaagagactgcttgttcaaaccagttaatgagagggaattccacaaattacacaaattaataagtactcctcacaatacaatgttagaagttagaa |
317 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43742244 |
agagaaagagactgcttgttcaaaccagtaaatgagagggaattc---------cacaaattaataagtactcctcacaatacaatgttagaagttagaa |
43742154 |
T |
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