View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2287_low_11 (Length: 219)
Name: NF2287_low_11
Description: NF2287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2287_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 44857678 - 44857477
Alignment:
| Q |
14 |
aatataataaatcaaattatcaatcatttggtctcaaataaaactgaataatacacttataaaagaaaagtttga---------------ttaaaagaag |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
44857678 |
aatataataaatcaaattatcaatcatttggtctcaaataaaactgaataatacacttataaaagaaaagtttgaattagaagagtttgattaaatgaag |
44857579 |
T |
|
| Q |
99 |
tgggtgatgtaaatataagtgacagtttcttgtactgtcttgatagttgaagcaaagcaaagcaaatcgaatgaataatggcgctcacatcctctattcg |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
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| T |
44857578 |
tgggtgatgtaaatataagtgacagtttcttgtactgtcttgatagttgaagcaaagcaaagcaaatcgaatgaataatgg---ttacatcctctattcg |
44857482 |
T |
|
| Q |
199 |
atttg |
203 |
Q |
| |
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||||| |
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| T |
44857481 |
atttg |
44857477 |
T |
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