View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2287_low_5 (Length: 339)

Name: NF2287_low_5
Description: NF2287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2287_low_5
NF2287_low_5
[»] chr2 (51 HSPs)
chr2 (61-323)||(43169359-43169621)
chr2 (61-195)||(43218868-43219002)
chr2 (206-323)||(43218706-43218826)
chr2 (14-61)||(11969081-11969128)
chr2 (14-61)||(21213913-21213960)
chr2 (14-61)||(43195813-43195860)
chr2 (7-61)||(3976499-3976553)
chr2 (16-62)||(10849518-10849564)
chr2 (15-61)||(18901892-18901938)
chr2 (15-61)||(21214229-21214275)
chr2 (15-61)||(23054356-23054402)
chr2 (15-61)||(42768362-42768408)
chr2 (25-61)||(15061293-15061329)
chr2 (18-61)||(17509142-17509185)
chr2 (14-61)||(25441725-25441772)
chr2 (14-61)||(43169271-43169318)
chr2 (15-61)||(883629-883675)
chr2 (15-61)||(20999017-20999063)
chr2 (27-61)||(30156250-30156284)
chr2 (15-61)||(38760345-38760391)
chr2 (15-60)||(27545145-27545190)
chr2 (15-60)||(39596735-39596780)
chr2 (17-61)||(10861862-10861906)
chr2 (17-61)||(15962185-15962229)
chr2 (17-61)||(33532764-33532808)
chr2 (14-61)||(3977031-3977078)
chr2 (14-61)||(6183394-6183441)
chr2 (15-62)||(7257635-7257682)
chr2 (17-60)||(12432137-12432180)
chr2 (15-61)||(884087-884133)
chr2 (15-57)||(6986448-6986490)
chr2 (27-61)||(7877886-7877920)
chr2 (15-61)||(10542091-10542137)
chr2 (15-61)||(12431928-12431974)
chr2 (15-61)||(17727434-17727480)
chr2 (15-61)||(19860067-19860113)
chr2 (15-61)||(29684041-29684087)
chr2 (27-61)||(30160369-30160403)
chr2 (15-61)||(33986003-33986049)
chr2 (15-61)||(34775387-34775433)
chr2 (15-60)||(3435515-3435560)
chr2 (17-54)||(11349828-11349865)
chr2 (17-54)||(11350222-11350259)
chr2 (17-62)||(14288953-14288998)
chr2 (29-62)||(28193602-28193635)
chr2 (15-60)||(29684249-29684294)
chr2 (4-61)||(31761350-31761407)
chr2 (17-61)||(936844-936888)
chr2 (17-61)||(10862086-10862130)
chr2 (29-61)||(15961828-15961860)
chr2 (17-61)||(28193363-28193407)
[»] chr4 (52 HSPs)
chr4 (3-61)||(52214633-52214691)
chr4 (15-61)||(48843045-48843091)
chr4 (14-62)||(32987498-32987546)
chr4 (14-62)||(45426963-45427011)
chr4 (15-62)||(990577-990624)
chr4 (14-61)||(45427280-45427327)
chr4 (14-61)||(53740211-53740258)
chr4 (15-61)||(991067-991113)
chr4 (15-61)||(22867114-22867160)
chr4 (15-61)||(29669391-29669437)
chr4 (15-61)||(29669706-29669752)
chr4 (15-61)||(43972385-43972431)
chr4 (15-61)||(51469511-51469557)
chr4 (15-61)||(52827260-52827306)
chr4 (18-61)||(27048165-27048208)
chr4 (18-61)||(27048436-27048479)
chr4 (18-61)||(28085727-28085770)
chr4 (6-57)||(56511318-56511369)
chr4 (6-57)||(56511525-56511576)
chr4 (15-61)||(991234-991280)
chr4 (15-61)||(5488397-5488443)
chr4 (15-61)||(12016711-12016757)
chr4 (15-61)||(12016919-12016965)
chr4 (15-61)||(15665183-15665229)
chr4 (27-61)||(21497711-21497745)
chr4 (27-61)||(21498229-21498263)
chr4 (15-61)||(23018500-23018546)
chr4 (15-61)||(25753633-25753679)
chr4 (15-61)||(29113479-29113525)
chr4 (15-61)||(43943703-43943749)
chr4 (15-61)||(49380690-49380736)
chr4 (15-61)||(49380908-49380954)
chr4 (17-61)||(35269043-35269087)
chr4 (17-61)||(46528951-46528995)
chr4 (30-61)||(34206021-34206052)
chr4 (30-61)||(34206283-34206314)
chr4 (14-61)||(53739895-53739942)
chr4 (18-61)||(56509642-56509685)
chr4 (15-61)||(33797137-33797183)
chr4 (27-61)||(41176748-41176782)
chr4 (15-61)||(43972069-43972115)
chr4 (15-57)||(50307306-50307348)
chr4 (15-61)||(51470513-51470559)
chr4 (15-61)||(53738236-53738282)
chr4 (17-54)||(2016564-2016601)
chr4 (16-57)||(10390708-10390749)
chr4 (27-60)||(13254425-13254458)
chr4 (14-51)||(50858357-50858394)
chr4 (17-62)||(52810652-52810697)
chr4 (17-61)||(11290201-11290245)
chr4 (33-61)||(29734609-29734637)
chr4 (17-61)||(50868041-50868085)
[»] chr6 (26 HSPs)
chr6 (14-61)||(1744870-1744917)
chr6 (15-61)||(8144047-8144093)
chr6 (27-61)||(10418366-10418400)
chr6 (15-61)||(10733466-10733512)
chr6 (15-61)||(15101139-15101185)
chr6 (15-61)||(16876858-16876904)
chr6 (15-61)||(16877038-16877084)
chr6 (15-61)||(19054523-19054569)
chr6 (15-61)||(19712637-19712683)
chr6 (15-61)||(24055137-24055183)
chr6 (15-61)||(28149823-28149869)
chr6 (15-61)||(29742464-29742510)
chr6 (17-61)||(21067085-21067129)
chr6 (17-61)||(21088876-21088920)
chr6 (17-61)||(26842752-26842796)
chr6 (15-61)||(31901-31947)
chr6 (15-61)||(5269301-5269347)
chr6 (15-61)||(11313410-11313456)
chr6 (27-61)||(17147933-17147967)
chr6 (15-61)||(19753632-19753678)
chr6 (15-61)||(24558613-24558659)
chr6 (27-61)||(27914354-27914388)
chr6 (17-62)||(8427582-8427627)
chr6 (15-60)||(12134512-12134557)
chr6 (15-60)||(21043810-21043855)
chr6 (17-61)||(25184242-25184286)
[»] chr8 (30 HSPs)
chr8 (3-61)||(36997184-36997242)
chr8 (15-61)||(18905886-18905932)
chr8 (15-61)||(21085176-21085222)
chr8 (15-61)||(34248107-34248153)
chr8 (15-61)||(34248389-34248435)
chr8 (16-61)||(21653835-21653880)
chr8 (17-61)||(20298544-20298588)
chr8 (17-61)||(32931433-32931477)
chr8 (15-61)||(3183939-3183985)
chr8 (15-61)||(10989062-10989108)
chr8 (15-61)||(10989269-10989315)
chr8 (15-61)||(15011057-15011103)
chr8 (15-61)||(23027856-23027902)
chr8 (15-61)||(40902421-40902467)
chr8 (15-61)||(42228801-42228847)
chr8 (15-61)||(43599341-43599387)
chr8 (17-61)||(15711528-15711572)
chr8 (15-62)||(5720894-5720941)
chr8 (15-61)||(4195978-4196024)
chr8 (15-61)||(8559611-8559657)
chr8 (15-61)||(15010849-15010895)
chr8 (27-61)||(39124966-39125000)
chr8 (27-57)||(39588116-39588146)
chr8 (27-61)||(43984344-43984378)
chr8 (17-54)||(14019840-14019877)
chr8 (15-60)||(20760689-20760734)
chr8 (16-61)||(21653358-21653403)
chr8 (32-61)||(36993975-36994004)
chr8 (15-63)||(18313814-18313862)
chr8 (17-61)||(18464102-18464146)
[»] chr3 (60 HSPs)
chr3 (14-61)||(44573965-44574012)
chr3 (15-61)||(13769319-13769365)
chr3 (15-61)||(27219359-27219405)
chr3 (15-61)||(49477357-49477403)
chr3 (15-60)||(24860090-24860135)
chr3 (15-60)||(43101400-43101445)
chr3 (17-61)||(44573671-44573715)
chr3 (15-62)||(22339771-22339818)
chr3 (6-57)||(35011885-35011936)
chr3 (14-61)||(44573355-44573402)
chr3 (15-61)||(14170027-14170073)
chr3 (27-61)||(21750517-21750551)
chr3 (27-61)||(31564031-31564065)
chr3 (27-61)||(34715483-34715517)
chr3 (27-61)||(38300780-38300814)
chr3 (15-61)||(39078799-39078845)
chr3 (15-61)||(39956702-39956748)
chr3 (15-61)||(45443310-45443356)
chr3 (15-61)||(49477564-49477610)
chr3 (15-57)||(50203889-50203931)
chr3 (15-61)||(50692353-50692399)
chr3 (15-61)||(50692556-50692602)
chr3 (28-61)||(10453731-10453764)
chr3 (15-60)||(47833691-47833736)
chr3 (15-60)||(54369069-54369114)
chr3 (17-61)||(9180400-9180444)
chr3 (17-61)||(10450676-10450720)
chr3 (17-61)||(11244569-11244613)
chr3 (17-61)||(48511667-48511711)
chr3 (27-62)||(9179175-9179210)
chr3 (27-61)||(3985815-3985849)
chr3 (15-61)||(9264114-9264160)
chr3 (15-61)||(9264321-9264367)
chr3 (15-61)||(21832227-21832273)
chr3 (31-61)||(22407469-22407499)
chr3 (31-61)||(22407676-22407706)
chr3 (27-57)||(31563731-31563761)
chr3 (27-61)||(34356870-34356904)
chr3 (15-61)||(34992899-34992945)
chr3 (15-53)||(35015515-35015553)
chr3 (15-61)||(35358481-35358527)
chr3 (27-61)||(38300311-38300345)
chr3 (27-61)||(40230667-40230701)
chr3 (14-60)||(48685346-48685392)
chr3 (15-61)||(51338469-51338515)
chr3 (15-61)||(51642456-51642502)
chr3 (15-61)||(51642663-51642709)
chr3 (15-61)||(53639993-53640039)
chr3 (15-61)||(53640200-53640246)
chr3 (15-61)||(54495561-54495607)
chr3 (17-50)||(10856665-10856698)
chr3 (15-60)||(19820557-19820602)
chr3 (28-61)||(50057072-50057105)
chr3 (18-55)||(53761432-53761469)
chr3 (15-55)||(5440642-5440682)
chr3 (17-61)||(10450452-10450496)
chr3 (17-61)||(24453810-24453854)
chr3 (23-59)||(24847998-24848034)
chr3 (17-61)||(42258942-42258986)
chr3 (17-61)||(48511438-48511482)
[»] chr1 (51 HSPs)
chr1 (14-61)||(36326935-36326982)
chr1 (15-61)||(2697359-2697405)
chr1 (15-61)||(4022153-4022199)
chr1 (15-61)||(17419817-17419863)
chr1 (15-61)||(31305741-31305787)
chr1 (15-57)||(38871187-38871229)
chr1 (15-61)||(43423309-43423355)
chr1 (4-57)||(29413367-29413420)
chr1 (17-61)||(19937071-19937115)
chr1 (17-61)||(38474315-38474359)
chr1 (14-61)||(20735551-20735598)
chr1 (15-61)||(8520121-8520167)
chr1 (15-61)||(12233313-12233359)
chr1 (27-61)||(20735797-20735831)
chr1 (15-61)||(33879806-33879852)
chr1 (15-61)||(33964403-33964449)
chr1 (15-57)||(35892051-35892093)
chr1 (15-57)||(38870981-38871023)
chr1 (15-61)||(39649112-39649158)
chr1 (15-61)||(40664240-40664286)
chr1 (15-61)||(43361580-43361626)
chr1 (27-61)||(45403482-45403516)
chr1 (15-60)||(39648907-39648952)
chr1 (17-62)||(45858687-45858732)
chr1 (17-61)||(12287880-12287924)
chr1 (17-61)||(17295010-17295054)
chr1 (17-61)||(27958075-27958119)
chr1 (17-61)||(29228480-29228524)
chr1 (17-61)||(33562155-33562199)
chr1 (15-59)||(35024277-35024321)
chr1 (27-61)||(463111-463145)
chr1 (27-61)||(2104288-2104322)
chr1 (15-57)||(10017360-10017402)
chr1 (27-61)||(11149451-11149485)
chr1 (15-61)||(11590450-11590496)
chr1 (15-61)||(15391849-15391895)
chr1 (27-61)||(21638294-21638328)
chr1 (15-61)||(24131909-24131955)
chr1 (15-61)||(29273253-29273299)
chr1 (27-61)||(36332154-36332188)
chr1 (15-57)||(37600902-37600944)
chr1 (27-61)||(40367617-40367651)
chr1 (15-61)||(43361785-43361831)
chr1 (15-61)||(52846877-52846923)
chr1 (15-60)||(21538963-21539008)
chr1 (27-60)||(22892462-22892495)
chr1 (28-61)||(35024488-35024521)
chr1 (15-55)||(15391778-15391818)
chr1 (15-59)||(25799150-25799194)
chr1 (17-61)||(27957837-27957881)
chr1 (17-53)||(29228707-29228743)
[»] chr7 (52 HSPs)
chr7 (15-61)||(1661219-1661265)
chr7 (15-61)||(7135271-7135317)
chr7 (15-57)||(36492575-36492617)
chr7 (15-61)||(37272073-37272119)
chr7 (14-60)||(41670612-41670658)
chr7 (15-61)||(43288562-43288608)
chr7 (248-316)||(19025512-19025580)
chr7 (248-316)||(20729056-20729124)
chr7 (17-61)||(43384308-43384352)
chr7 (17-60)||(22206307-22206350)
chr7 (17-60)||(22228389-22228432)
chr7 (15-62)||(29780177-29780224)
chr7 (15-61)||(6782856-6782902)
chr7 (15-61)||(6783068-6783114)
chr7 (27-61)||(28910074-28910108)
chr7 (15-61)||(29252606-29252652)
chr7 (15-61)||(36237832-36237878)
chr7 (15-61)||(39808625-39808671)
chr7 (17-58)||(257298-257339)
chr7 (15-60)||(9379030-9379075)
chr7 (17-62)||(14991536-14991581)
chr7 (17-62)||(15421147-15421192)
chr7 (15-60)||(43288294-43288339)
chr7 (17-61)||(36092627-36092671)
chr7 (17-61)||(36495921-36495965)
chr7 (17-61)||(37530951-37530995)
chr7 (17-61)||(47346122-47346166)
chr7 (17-61)||(47346351-47346395)
chr7 (15-61)||(1663632-1663679)
chr7 (18-61)||(14691105-14691148)
chr7 (14-61)||(40121646-40121693)
chr7 (14-61)||(40121967-40122014)
chr7 (27-61)||(480193-480227)
chr7 (27-61)||(5775924-5775958)
chr7 (27-61)||(6813311-6813345)
chr7 (15-61)||(6959994-6960040)
chr7 (15-57)||(16565128-16565170)
chr7 (15-57)||(16600492-16600534)
chr7 (27-61)||(31374807-31374841)
chr7 (27-57)||(34590570-34590600)
chr7 (15-57)||(39808496-39808538)
chr7 (27-61)||(40703439-40703473)
chr7 (15-57)||(43167925-43167967)
chr7 (27-61)||(44760535-44760569)
chr7 (15-57)||(47856023-47856065)
chr7 (17-54)||(36495698-36495735)
chr7 (17-61)||(27585288-27585332)
chr7 (17-61)||(34748810-34748854)
chr7 (17-61)||(36092420-36092464)
chr7 (17-61)||(37755966-37756010)
chr7 (17-61)||(37756192-37756236)
chr7 (17-61)||(37761940-37761984)
[»] chr5 (50 HSPs)
chr5 (15-61)||(48339-48385)
chr5 (15-60)||(1028122-1028167)
chr5 (17-61)||(29396371-29396415)
chr5 (17-61)||(33040095-33040139)
chr5 (14-61)||(13843726-13843773)
chr5 (15-61)||(48132-48178)
chr5 (15-61)||(2908590-2908636)
chr5 (15-61)||(13413614-13413660)
chr5 (14-60)||(13844042-13844088)
chr5 (15-61)||(28156268-28156314)
chr5 (15-61)||(29432442-29432488)
chr5 (15-61)||(35527016-35527062)
chr5 (15-61)||(37995662-37995708)
chr5 (15-61)||(38663277-38663323)
chr5 (17-61)||(84062-84106)
chr5 (14-54)||(22196361-22196401)
chr5 (14-57)||(2716372-2716415)
chr5 (15-62)||(4296692-4296739)
chr5 (15-62)||(18914188-18914235)
chr5 (18-61)||(24918194-24918237)
chr5 (18-61)||(24994102-24994145)
chr5 (15-61)||(873724-873770)
chr5 (27-61)||(2471721-2471755)
chr5 (15-57)||(2716576-2716618)
chr5 (27-61)||(2908797-2908831)
chr5 (15-61)||(3762936-3762982)
chr5 (27-61)||(12965274-12965308)
chr5 (15-61)||(15510532-15510578)
chr5 (15-57)||(18107863-18107905)
chr5 (15-61)||(18914396-18914442)
chr5 (15-61)||(20811484-20811530)
chr5 (15-61)||(20837839-20837885)
chr5 (23-61)||(24792150-24792188)
chr5 (15-61)||(27760105-27760151)
chr5 (15-61)||(28010144-28010190)
chr5 (27-61)||(28156072-28156106)
chr5 (15-61)||(28358063-28358109)
chr5 (15-61)||(34457126-34457172)
chr5 (15-61)||(37656760-37656806)
chr5 (15-61)||(37781872-37781918)
chr5 (15-61)||(38131794-38131840)
chr5 (15-61)||(38376761-38376807)
chr5 (15-57)||(39268048-39268090)
chr5 (17-62)||(30329868-30329913)
chr5 (17-61)||(83839-83882)
chr5 (29-61)||(1892118-1892150)
chr5 (15-55)||(17135549-17135589)
chr5 (17-61)||(18541754-18541798)
chr5 (17-61)||(30330093-30330137)
chr5 (17-53)||(32395350-32395386)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-62)||(21290-21337)
[»] scaffold0434 (2 HSPs)
scaffold0434 (15-61)||(13336-13382)
scaffold0434 (15-61)||(13543-13589)
[»] scaffold0029 (1 HSPs)
scaffold0029 (15-61)||(76882-76928)
[»] scaffold1138 (1 HSPs)
scaffold1138 (15-61)||(2107-2153)
[»] scaffold0989 (1 HSPs)
scaffold0989 (15-61)||(2975-3021)
[»] scaffold0166 (1 HSPs)
scaffold0166 (23-61)||(34533-34571)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-61)||(165816-165860)


Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 61 - 323
Target Start/End: Original strand, 43169359 - 43169621
Alignment:
Q  61 gtaagaacataaaatttagatttgtaacagaaactaataataatttatcttatcaacttttttgtataatacaatgtttgcaatctttacatgccagtgc 160  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43169359 gtaagaacatcaaatttagatttgtaacagaaactaataataatatatcttatcaacttttttgtataatacaatgtttgcaatctttacatgccggtgc 43169458  T
Q  161 tcataaattaagcatatattttatacaaaactaagcgttcggcaccagttacagacacaagactttatcttcaacggatactgctatggttgaaattagc 260  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  43169459 tcataaattaagcatatattttatacaaaactaagggttcggcaccagttacagacacaagacttcatcttcaacggatactgctacggttgaaattagc 43169558  T
Q  261 aaagggctcattgtttgtctttggtgctgctgcagggtttccaaagatattccaaattttcac 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43169559 aaagggctcattgtttgtctttggtgctgctgcagggtttccaaagatattccaaattttcac 43169621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 43219002 - 43218868
Alignment:
Q  61 gtaagaacataaaatttagatttgtaacagaaactaataataatttatcttatcaacttttttgtataatacaatgtttgcaatctttacatgccagtgc 160  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43219002 gtaagaacataaaatttagatttgtaacacaaactaataataatacatcttatcaacttttttgtatgatacaatgtttgcaatctttacatgccagtgc 43218903  T
Q  161 tcataaattaagcatatattttatacaaaactaag 195  Q
    ||||||||  | ||||||||| |||||||||||||    
T  43218902 tcataaatacatcatatatttaatacaaaactaag 43218868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 43218826 - 43218706
Alignment:
Q  206 cagttacagacacaagactttatcttcaacggatactgctatggttgaaattagcaaagggctcattgtttgtctttggtgctg---ctgcagggtttcc 302  Q
    |||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||| ||||||||    
T  43218826 cagttacacacacaaggcttcatcttcaacgaatactgctatggttgaaattagcaaagggctgattgtttgtctttggtgctgctgctgctgggtttcc 43218727  T
Q  303 aaagatattccaaattttcac 323  Q
    |||||||||||||||||||||    
T  43218726 aaagatattccaaattttcac 43218706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 11969081 - 11969128
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  11969081 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 11969128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 21213960 - 21213913
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  21213960 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 21213913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 43195813 - 43195860
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  43195813 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 43195860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 3976553 - 3976499
Alignment:
Q  7 tagattatactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| ||| |||||| || |||||||||||||||||||||||||||||||||||    
T  3976553 tagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaag 3976499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 10849564 - 10849518
Alignment:
Q  16 ctcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||    
T  10849564 ctcttgataagagtttataaagaggaggcactcctcaccttacaagt 10849518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 18901938 - 18901892
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  18901938 actcttgaaaagagtttataaagaggaggcactcttcaccttacaag 18901892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 21214275 - 21214229
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  21214275 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 21214229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 23054356 - 23054402
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  23054356 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 23054402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 42768408 - 42768362
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  42768408 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 42768362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15061329 - 15061293
Alignment:
Q  25 aaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  15061329 aaagtttataaagaggaggcactcctcaccttacaag 15061293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17509142 - 17509185
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  17509142 cttgagaagagtttataaagaggaggcactcctcaccttacaag 17509185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 25441725 - 25441772
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||    
T  25441725 tactcttgagaagagtttataaagagggggcactcctcaccttacaag 25441772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 43169271 - 43169318
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  43169271 tactcttgagaagagtttataaagaggaggcactcctcacctttcaag 43169318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 883675 - 883629
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  883675 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 883629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 20999063 - 20999017
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  20999063 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 20999017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 30156250 - 30156284
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  30156250 agtttataaagaggaggcactcctcaccttacaag 30156284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 38760391 - 38760345
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||    
T  38760391 actcttgataagagtttataaagaggaggcactcgtcaccttacaag 38760345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 27545190 - 27545145
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||    
T  27545190 actcttgagaagagtttataaagaggaggcaatcctcaccttacaa 27545145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 39596780 - 39596735
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||    
T  39596780 actcttgataagagtttataaagaggaggcactcctcgccttacaa 39596735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 10861906 - 10861862
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  10861906 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 10861862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 15962229 - 15962185
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  15962229 tcttgagaatagtttataaagaggaggcactcctcaccgtacaag 15962185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 33532808 - 33532764
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  33532808 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 33532764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 3977078 - 3977031
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || ||||||||||||||||||||||||||  |||||||    
T  3977078 tactcttgagaagagtttataaagaggaggcactcctcaaattacaag 3977031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 6183441 - 6183394
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||| |||| |||||||||||||    
T  6183441 tactcttgagaagagtttataaagaggagacacttctcaccttacaag 6183394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 7257682 - 7257635
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||||||||||||||| ||| ||||||||||||||||    
T  7257682 actcttgagaatagtttataaagaggatgcaatcctcaccttacaagt 7257635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 12432137 - 12432180
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||| || ||||||||||||||||||| ||||||||||||||    
T  12432137 tcttgagaagagtttataaagaggaggcaatcctcaccttacaa 12432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 884087 - 884133
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  884087 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 6986490 - 6986448
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  6986490 actcttgagaagagtttataaagaggaggcaatcctcacctta 6986448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 7877886 - 7877920
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||| ||||||||||||||||||    
T  7877886 agtttataaagaggagacactcctcaccttacaag 7877920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 10542137 - 10542091
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| ||||||||| ||||||||    
T  10542137 actcttgataagagtttataaagaggagacactcctcatcttacaag 10542091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 12431928 - 12431974
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| || |||||||||||||||    
T  12431928 actcttgagaagagtttataaagaggagacaatcctcaccttacaag 12431974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 17727434 - 17727480
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||| ||||| |||||||||||||||    
T  17727434 actcttgagaagagtttataaagagaaggcaatcctcaccttacaag 17727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 19860067 - 19860113
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| ||| |||||||||||    
T  19860067 actcttgagaagagtttataaagaggaggcaatccacaccttacaag 19860113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 29684041 - 29684087
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  29684041 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 29684087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 30160369 - 30160403
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||| ||||||||||    
T  30160369 agtttataaagaggaggcactccttaccttacaag 30160403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33986049 - 33986003
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  33986049 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 33986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34775387 - 34775433
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || | ||||||||||||||||| |||||||||||||||    
T  34775387 actcttgagaagaatttataaagaggaggcaatcctcaccttacaag 34775433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 3435560 - 3435515
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||    
T  3435560 actcttgagaagagtttatacagaggaggcaatcctcaccttacaa 3435515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 11349865 - 11349828
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    |||||| || ||||||||||||||||||||||||||||    
T  11349865 tcttgagaagagtttataaagaggaggcactcctcacc 11349828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 11350259 - 11350222
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    |||||| || ||||||||||||||||||||||||||||    
T  11350259 tcttgagaagagtttataaagaggaggcactcctcacc 11350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 14288953 - 14288998
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||||||||||||| ||||||||||| |||||||    
T  14288953 tcttgagaagagtttataaagaggagacactcctcaccgtacaagt 14288998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 28193635 - 28193602
Alignment:
Q  29 tttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||||||||||||||||||||| |||||||    
T  28193635 tttataaagaggaggcactcctcaccgtacaagt 28193602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 29684249 - 29684294
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||| ||||||||||||||| ||||||||||||||    
T  29684249 actcttgagaagagtatataaagaggaggcaatcctcaccttacaa 29684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 31761350 - 31761407
Alignment:
Q  4 gggtagattatactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| | |||||| | || |||||||| |||||||||| |||||||||||||||    
T  31761350 gggtagataagactcttaataagagtttatatagaggaggcaatcctcaccttacaag 31761407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 936844 - 936888
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||| ||||||||||| ||||||    
T  936844 tcttgagaagagtttataaagaggagacactcctcaccgtacaag 936888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 10862130 - 10862086
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  10862130 tcttgagaagagtttataaagaggaggcactcatcaccgtacaag 10862086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 15961860 - 15961828
Alignment:
Q  29 tttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||| ||||||    
T  15961860 tttataaagaggaggcactcctcaccgtacaag 15961828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 28193407 - 28193363
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||| ||||||||||||||||| ||||||    
T  28193407 tcttgagaagagtttataaataggaggcactcctcaccgtacaag 28193363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 52214633 - 52214691
Alignment:
Q  3 tgggtagattatactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  52214633 tgggtagataatactcttgataagagtttataaagaggaggcactcctcaccttacaag 52214691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 48843091 - 48843045
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  48843091 actcttgaaaagagtttataaagaggaggcactcctcaccttacaag 48843045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 32987546 - 32987498
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  32987546 tactcttgagaaaagtttataaagaggaggcactccgcaccttacaagt 32987498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 45427011 - 45426963
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  45427011 tactcttgagaagagtttataaagaggaggcactcctcaccttacaagt 45426963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 990577 - 990624
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||    
T  990577 actcttgagaagagtttataaagaggaggcactcctcaccttacaagt 990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 45427327 - 45427280
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  45427327 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 45427280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 53740211 - 53740258
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  53740211 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 53740258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 991067 - 991113
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  991067 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 991113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 22867114 - 22867160
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  22867114 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 22867160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 29669437 - 29669391
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  29669437 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 29669391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 29669752 - 29669706
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  29669752 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 29669706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43972385 - 43972431
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43972385 actcttgagaaaagttgataaagaggaggcactcctcaccttacaag 43972431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 51469511 - 51469557
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  51469511 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 51469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 52827306 - 52827260
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  52827306 actcttgataagagtttataaagaggaggcactcctcaccttacaag 52827260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27048208 - 27048165
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  27048208 cttgataaaagtttataaagaggaggcactcctcaccttgcaag 27048165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27048479 - 27048436
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  27048479 cttgataagagtttataaagaggaggcactcctcaccttacaag 27048436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 28085727 - 28085770
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  28085727 cttgataagagtttataaagaggaggcactcctcaccttacaag 28085770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 56511318 - 56511369
Alignment:
Q  6 gtagattatactcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||| | |||||||| || |||||||||||||||||||||||||||||||    
T  56511318 gtagataagactcttgataagagtttataaagaggaggcactcctcacctta 56511369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 56511525 - 56511576
Alignment:
Q  6 gtagattatactcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||| | |||||||| || |||||||||||||||||||||||||||||||    
T  56511525 gtagataagactcttgataagagtttataaagaggaggcactcctcacctta 56511576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 991234 - 991280
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||    
T  991234 actcttgagaagagtttataatgaggaggcactcctcaccttacaag 991280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 5488397 - 5488443
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  5488397 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 5488443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 12016757 - 12016711
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  12016757 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 12016711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 12016965 - 12016919
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  12016965 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 12016919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 15665183 - 15665229
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||    
T  15665183 actcttgagaagagtttatatagaggaggcactcctcaccttacaag 15665229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 21497745 - 21497711
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  21497745 agtttataaagaggaggcactcctcaccttacaag 21497711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 21498229 - 21498263
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  21498229 agtttataaagaggaggcactcctcaccttacaag 21498263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 23018500 - 23018546
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  23018500 actcttgagaagagtttataaagaggaggcattcctcaccttacaag 23018546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 25753679 - 25753633
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  25753679 actcttgataagagtttataaagaggaggcaatcctcaccttacaag 25753633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 29113479 - 29113525
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  29113479 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 29113525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43943703 - 43943749
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  43943703 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 43943749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 49380690 - 49380736
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  49380690 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 49380736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 49380954 - 49380908
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  49380954 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 49380908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 35269043 - 35269087
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||| |||||||||||||||||||    
T  35269043 tcttgagaagagtttataaagaggaagcactcctcaccttacaag 35269087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 46528995 - 46528951
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  46528995 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 46528951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 34206052 - 34206021
Alignment:
Q  30 ttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||||||    
T  34206052 ttataaagaggaggcactcctcaccttacaag 34206021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 34206314 - 34206283
Alignment:
Q  30 ttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||||||    
T  34206314 ttataaagaggaggcactcctcaccttacaag 34206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 53739895 - 53739942
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || ||||||||||||||||| |||||||| ||||||||    
T  53739895 tactcttgagaagagtttataaagaggaggaactcctcagcttacaag 53739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 56509642 - 56509685
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || |||||||||||||||||||||||||| ||||||||    
T  56509642 cttgagaagagtttataaagaggaggcactcctcaacttacaag 56509685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33797183 - 33797137
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||| ||||||||||||||||| ||||    
T  33797183 actcttgataagagtttataaagacgaggcactcctcaccttccaag 33797137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 41176748 - 41176782
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  41176748 agtttataaagaggaagcactcctcaccttacaag 41176782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43972069 - 43972115
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||| ||||||||||| ||||||||||||||||||    
T  43972069 actcttgagaagagttgataaagaggagacactcctcaccttacaag 43972115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 50307306 - 50307348
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||| |||||||||||||||||||    
T  50307306 actcttgacaagagtttataaagcggaggcactcctcacctta 50307348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 51470513 - 51470559
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||| |||||||| ||||||||||||||||    
T  51470513 actcttgagaagagtttataaggaggaggctctcctcaccttacaag 51470559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 53738282 - 53738236
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| ||||| ||||||||||||    
T  53738282 actcttgagaagagtttataaagaggagacactcgtcaccttacaag 53738236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 2016564 - 2016601
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    |||||| || ||||||||||||||||||||||||||||    
T  2016564 tcttgagaagagtttataaagaggaggcactcctcacc 2016601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 10390749 - 10390708
Alignment:
Q  16 ctcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  10390749 ctcttgataatagtttataaagaggagacactcctcacctta 10390708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 13254425 - 13254458
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||||||| |||||||||||||||||||||    
T  13254425 agtttataaagatgaggcactcctcaccttacaa 13254458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 50858357 - 50858394
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctc 51  Q
    ||||||||| || |||||||||||||||||||||||||    
T  50858357 tactcttgagaagagtttataaagaggaggcactcctc 50858394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 52810697 - 52810652
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||||||||||||| ||||||||||| |||||||    
T  52810697 tcttgagaagagtttataaagaggagacactcctcaccgtacaagt 52810652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 11290201 - 11290245
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||    
T  11290201 tcttgagaagagtttataaagaggaggcattcctcaccgtacaag 11290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 29734609 - 29734637
Alignment:
Q  33 taaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||    
T  29734609 taaagaggaggcactcctcaccttacaag 29734637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 50868085 - 50868041
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||    
T  50868085 tcttgagaagagtttataaagaggaggcattcctcaccgtacaag 50868041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 1744917 - 1744870
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1744917 tactcttgaaaagagtttataaagaggaggcactcctcaccttacaag 1744870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 8144047 - 8144093
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  8144047 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 8144093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 10418400 - 10418366
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  10418400 agtttataaagaggaggcactcctcaccttacaag 10418366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 10733512 - 10733466
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||    
T  10733512 actcttgagaagagtttataaagaggagacactcctcaccttacaag 10733466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 15101185 - 15101139
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  15101185 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 15101139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 16876904 - 16876858
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  16876904 actcttgagaatagtttataaagaggaggcaatcctcaccttacaag 16876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 16877084 - 16877038
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  16877084 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 16877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 19054523 - 19054569
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||    
T  19054523 actcttgagaagagtttataaagatgaggcactcctcaccttacaag 19054569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 19712683 - 19712637
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  19712683 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 19712637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 24055183 - 24055137
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||    
T  24055183 actcttgagaagagtttataaagacgaggcactcctcaccttacaag 24055137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 28149823 - 28149869
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  28149823 actcttgataagagtttataaagaggaggcaatcctcaccttacaag 28149869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 29742510 - 29742464
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||    
T  29742510 actcttgatgaaagtttataaagaggaggcaatcctcaccttacaag 29742464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 21067129 - 21067085
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  21067129 tcttgagaagagtttataaagaggaggcactcctccccttacaag 21067085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 21088920 - 21088876
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  21088920 tcttgagaagagtttataaagaggaggcactcctccccttacaag 21088876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 26842752 - 26842796
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  26842752 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 26842796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 31947 - 31901
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||| ||||||||||||| ||||||||    
T  31947 actcttgataagagtttataaagacgaggcactcctcaacttacaag 31901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 5269347 - 5269301
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||| ||||| |||||||||||||||    
T  5269347 actcttgagaagagtttataaagagaaggcaatcctcaccttacaag 5269301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 11313456 - 11313410
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  11313456 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 11313410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 17147967 - 17147933
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| |||||||||||||||    
T  17147967 agtttataaagaggaggcaatcctcaccttacaag 17147933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 19753678 - 19753632
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||| || ||||||||||||||||||    
T  19753678 actcttgagaagagtttataaagagaagacactcctcaccttacaag 19753632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 24558613 - 24558659
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  24558613 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 24558659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 27914388 - 27914354
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||| ||||||||||    
T  27914388 agtttataaagaggaggcactccttaccttacaag 27914354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 8427582 - 8427627
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||| ||||||||||||||||||||| |||||||    
T  8427582 tcttgagaagagtttagaaagaggaggcactcctcaccgtacaagt 8427627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 12134557 - 12134512
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || |||||||||||||||| ||||||| |||||||||    
T  12134557 actcttgagaagagtttataaagaggagacactcctaaccttacaa 12134512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 21043855 - 21043810
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||| ||||||||||| ||||||||    
T  21043855 actcttgagaagagtttataaagagaaggcactcctccccttacaa 21043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 25184242 - 25184286
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||| ||| |||||||||||||||    
T  25184242 tcttgataagagtttataaagaggaagcaatcctcaccttacaag 25184286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 36997184 - 36997242
Alignment:
Q  3 tgggtagattatactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||  ||||||||| || |||||||||||||||||||||||||||||||||||    
T  36997184 tgggtagatactactcttgataagagtttataaagaggaggcactcctcaccttacaag 36997242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 18905886 - 18905932
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  18905886 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 18905932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 21085222 - 21085176
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  21085222 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 21085176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34248107 - 34248153
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  34248107 actcttgataagagtttataaagaggaggcactcctcaccttacaag 34248153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34248389 - 34248435
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  34248389 actcttgataagagtttataaagaggaggcactcctcaccttacaag 34248435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 21653835 - 21653880
Alignment:
Q  16 ctcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21653835 ctcttgagaaaagtttatacagaggaggcactcctcaccttacaag 21653880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20298588 - 20298544
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  20298588 tcttgagaagagtttataaagaggaggcactcctcaccttacaag 20298544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 32931433 - 32931477
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  32931433 tcttgagaagagtttataaagaggaggcactcctcaccttacaag 32931477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 3183985 - 3183939
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  3183985 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 3183939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 10989108 - 10989062
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  10989108 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 10989062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 10989315 - 10989269
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  10989315 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 10989269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 15011103 - 15011057
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  15011103 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 15011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 23027902 - 23027856
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || || ||||||||||||||||||||||||||||||||    
T  23027902 actcttgagaagagcttataaagaggaggcactcctcaccttacaag 23027856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 40902467 - 40902421
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  40902467 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 40902421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 42228801 - 42228847
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  42228801 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 42228847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43599341 - 43599387
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  43599341 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 43599387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 15711528 - 15711572
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  15711528 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 15711572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 5720941 - 5720894
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||||||||||||||||||| ||||||||||| ||||    
T  5720941 actcttgagaagagtttataaagaggaggcaatcctcaccttataagt 5720894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 4196024 - 4195978
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||    
T  4196024 actcttgagaagagtttatcaagaggaggcaatcctcaccttacaag 4195978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 8559611 - 8559657
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  8559611 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 8559657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 15010895 - 15010849
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || | ||||||||||||||||| |||||||||||||||    
T  15010895 actcttgagaagaatttataaagaggaggcaatcctcaccttacaag 15010849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 39124966 - 39125000
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||| ||||||||    
T  39124966 agtttataaagaggaggcactcctcatcttacaag 39125000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 39588146 - 39588116
Alignment:
Q  27 agtttataaagaggaggcactcctcacctta 57  Q
    |||||||||||||||||||||||||||||||    
T  39588146 agtttataaagaggaggcactcctcacctta 39588116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 43984378 - 43984344
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||| ||||||    
T  43984378 agtttataaagaggaggcactcctcaccatacaag 43984344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 14019840 - 14019877
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    |||||| || ||||||||||||||||||||||||||||    
T  14019840 tcttgagaagagtttataaagaggaggcactcctcacc 14019877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 20760734 - 20760689
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || |||||||||||| |||||| ||||||||||||||    
T  20760734 actcttgagaagagtttataaagatgaggcaatcctcaccttacaa 20760689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 21653358 - 21653403
Alignment:
Q  16 ctcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||| || |||||||| |||||||||||| |||||||||||||    
T  21653358 ctcttgagaagagtttatatagaggaggcacttctcaccttacaag 21653403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 36994004 - 36993975
Alignment:
Q  32 ataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||||    
T  36994004 ataaagaggaggcactcctcaccttacaag 36993975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 18313814 - 18313862
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagta 63  Q
    |||||||  ||||||||||| |||||||||| |||||||||| ||||||    
T  18313814 actcttgttaaaagtttatatagaggaggcaatcctcacctttcaagta 18313862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 18464102 - 18464146
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||| |||||||||||||| ||||||    
T  18464102 tcttgagaagagtttataaagagaaggcactcctcaccgtacaag 18464146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 44573965 - 44574012
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  44573965 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 44574012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 13769365 - 13769319
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  13769365 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 13769319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 27219359 - 27219405
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  27219359 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 27219405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 49477357 - 49477403
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||    
T  49477357 actcttgagaaaagtttataaagaggaggcaatcctcaccttacaag 49477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 24860135 - 24860090
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  24860135 actcttgagaagagtttataaagaggaggcactcctcaccttacaa 24860090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 43101445 - 43101400
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  43101445 actcttgagaagagtttataaagaggaggcactcctcaccttacaa 43101400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 44573671 - 44573715
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  44573671 tcttgagaagagtttataaagaggaggcactcctcaccttacaag 44573715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 22339771 - 22339818
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||    
T  22339771 actcttgagaagagtttataaagaggaggcaatcctcaccttacaagt 22339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 35011885 - 35011936
Alignment:
Q  6 gtagattatactcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||| | |||||||| || |||||||||||||||||||||||||||||||    
T  35011885 gtagataagactcttgataagagtttataaagaggaggcactcctcacctta 35011936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 44573355 - 44573402
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||||    
T  44573355 tactcttgagaagagtttataaagaggaggcactcctcaccctacaag 44573402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 14170073 - 14170027
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || | |||||||||||||||||||||||||||||||||    
T  14170073 actcttgagaagattttataaagaggaggcactcctcaccttacaag 14170027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 21750517 - 21750551
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  21750517 agtttataaagaggaggcactcctcaccttacaag 21750551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 31564065 - 31564031
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  31564065 agtttataaagaggaggcactcctcaccttacaag 31564031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 34715517 - 34715483
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  34715517 agtttataaagaggaggcactcctcaccttacaag 34715483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 38300814 - 38300780
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  38300814 agtttataaagaggaggcactcctcaccttacaag 38300780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39078845 - 39078799
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  39078845 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 39078799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39956748 - 39956702
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  39956748 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 39956702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 45443310 - 45443356
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||    
T  45443310 actcttgagaagagtttataaagaggaggcactcttcaccttacaag 45443356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 49477564 - 49477610
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  49477564 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 49477610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 50203931 - 50203889
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  50203931 actcttgagaagagtttataaagaggaggcactcctcacctta 50203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 50692353 - 50692399
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  50692353 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 50692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 50692556 - 50692602
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  50692556 actcttgataagagtttataaagaggaggcaatcctcaccttacaag 50692602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 10453764 - 10453731
Alignment:
Q  28 gtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||||||||    
T  10453764 gtttataaagaggaggcactcctcaccttacaag 10453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 47833736 - 47833691
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||    
T  47833736 actcttgagaagtgtttataaagaggaggcactcctcaccttacaa 47833691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 54369069 - 54369114
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||    
T  54369069 actcttgagaagagtttataaagaggaggcactcctcactttacaa 54369114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 9180400 - 9180444
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||    
T  9180400 tcttgagaaaagtttataaagaggagacactcctcaccgtacaag 9180444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 10450720 - 10450676
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  10450720 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 10450676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 11244613 - 11244569
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  11244613 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 11244569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 48511711 - 48511667
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  48511711 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 48511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 9179175 - 9179210
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaagt 62  Q
    ||||||||||||||| ||||||||||||||||||||    
T  9179175 agtttataaagaggatgcactcctcaccttacaagt 9179210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 3985815 - 3985849
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  3985815 agtttataaagaggaagcactcctcaccttacaag 3985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 9264160 - 9264114
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  9264160 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 9264114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 9264367 - 9264321
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  9264367 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 9264321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 21832273 - 21832227
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| ||||||||||||||| |||||| ||||||||| |||||    
T  21832273 actcttgagaaaagtttataaagatgaggcaatcctcacctcacaag 21832227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 22407499 - 22407469
Alignment:
Q  31 tataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||    
T  22407499 tataaagaggaggcactcctcaccttacaag 22407469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 22407706 - 22407676
Alignment:
Q  31 tataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||    
T  22407706 tataaagaggaggcactcctcaccttacaag 22407676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 31563761 - 31563731
Alignment:
Q  27 agtttataaagaggaggcactcctcacctta 57  Q
    |||||||||||||||||||||||||||||||    
T  31563761 agtttataaagaggaggcactcctcacctta 31563731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 34356904 - 34356870
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  34356904 agtttataaagaggaagcactcctcaccttacaag 34356870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34992899 - 34992945
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| ||||||||| |||||    
T  34992899 actcttgagaagagtttataaagaggaggcaatcctcacctcacaag 34992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 35015515 - 35015553
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcac 53  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  35015515 actcttgataaaagtttataaagaggaggcaatcctcac 35015553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 35358527 - 35358481
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||| ||||| || |||||||||||||||    
T  35358527 actcttgaaaaaagtatataaaaaggagacaatcctcaccttacaag 35358481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 38300345 - 38300311
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||| |||||||||||    
T  38300345 agtttataaagaggaggcactccccaccttacaag 38300311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 40230701 - 40230667
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| |||||||||||||||    
T  40230701 agtttataaagaggaggcaatcctcaccttacaag 40230667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 48685392 - 48685346
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    ||||||||| || |||||||||||||||| |||||||||||| ||||    
T  48685392 tactcttgagaagagtttataaagaggagacactcctcacctcacaa 48685346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 51338515 - 51338469
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  51338515 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 51338469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 51642502 - 51642456
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  51642502 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 51642456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 51642709 - 51642663
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  51642709 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 51642663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 53640039 - 53639993
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  53640039 actcttgacaagagtatataaagaggaggcaatcctcaccttacaag 53639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 53640246 - 53640200
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  53640246 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 53640200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 54495561 - 54495607
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| || |||||||||||||||    
T  54495561 actcttgagaagagtttataaagaggagacaatcctcaccttacaag 54495607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 10856698 - 10856665
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcct 50  Q
    ||||||||| ||||||||||||||||||||||||    
T  10856698 tcttgaaaagagtttataaagaggaggcactcct 10856665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 19820602 - 19820557
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || |||||||||||||||| || ||||||||||||||    
T  19820602 actcttgagaagagtttataaagaggagacaatcctcaccttacaa 19820557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 50057072 - 50057105
Alignment:
Q  28 gtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| ||||||||||||||    
T  50057072 gtttataaagaggaggcacccctcaccttacaag 50057105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 53761469 - 53761432
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcacct 55  Q
    ||||| || |||||||||||||||||||||||||||||    
T  53761469 cttgataagagtttataaagaggaggcactcctcacct 53761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 5440642 - 5440682
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacct 55  Q
    |||||||| || ||||||||||||||||||| |||||||||    
T  5440642 actcttgagaagagtttataaagaggaggcaatcctcacct 5440682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 10450496 - 10450452
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||| |||||||||||||||||| ||||||    
T  10450496 tcttgagaagagtttataacgaggaggcactcctcaccgtacaag 10450452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 24453810 - 24453854
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||| ||||||||||||||||| ||||||    
T  24453810 tcttgagaagagtttataaacaggaggcactcctcaccgtacaag 24453854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 24847998 - 24848034
Alignment:
Q  23 aaaaagtttataaagaggaggcactcctcaccttaca 59  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  24847998 aaaaaatttataaagaggaggcactcctctccttaca 24848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 42258942 - 42258986
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||| ||||||||||||||| |||||||||||||||    
T  42258942 tcttgagaagagtatataaagaggaggcaatcctcaccttacaag 42258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 48511482 - 48511438
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||    
T  48511482 tcttgagaagagtttataaagaggaggcattcctcaccgtacaag 48511438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 36326935 - 36326982
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  36326935 tactcttgagaagagtttataaagaggaggcactcctcaccttacaag 36326982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 2697405 - 2697359
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  2697405 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 2697359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 4022199 - 4022153
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  4022199 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 4022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 17419817 - 17419863
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  17419817 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 17419863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 31305741 - 31305787
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  31305741 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 31305787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 38871229 - 38871187
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  38871229 actcttgataaaagtttataaagaggaggcactcctcacctta 38871187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43423309 - 43423355
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  43423309 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 43423355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29413367 - 29413420
Alignment:
Q  4 gggtagattatactcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| | |||||||| || |||||||||||||||||||||||||||||||    
T  29413367 gggtagataagactcttgataagagtttataaagaggaggcactcctcacctta 29413420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 19937115 - 19937071
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  19937115 tcttgagaagagtttataaagaggaggcactcctcaccttacaag 19937071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 38474315 - 38474359
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  38474315 tcttgacaagagtttataaagaggaggcactcctcaccttacaag 38474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20735551 - 20735598
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || | |||||||||||||||||||||||||||||||||    
T  20735551 tactcttgagaagaatttataaagaggaggcactcctcaccttacaag 20735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 8520167 - 8520121
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||    
T  8520167 actcttgagaagagtttataaagaagaggcactcctcaccttacaag 8520121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 12233313 - 12233359
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||    
T  12233313 actcttgagaagagtttataaagaggaggtactcctcaccttacaag 12233359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 20735797 - 20735831
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  20735797 agtttataaagaggaggcactcctcaccttacaag 20735831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33879852 - 33879806
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||    
T  33879852 actcttgagaagagtttataaagaggagccactcctcaccttacaag 33879806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 33964403 - 33964449
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||    
T  33964403 actcttgagaagagtttataaagaggagccactcctcaccttacaag 33964449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 35892051 - 35892093
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  35892051 actcttgataagagtttataaagaggaggcactcctcacctta 35892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 38871023 - 38870981
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  38871023 actcttgataaaagtttataaagtggaggcactcctcacctta 38870981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39649158 - 39649112
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  39649158 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 39649112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 40664240 - 40664286
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||    
T  40664240 actcttgataagagtttataaagaggaggcactcctcgccttacaag 40664286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 43361626 - 43361580
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  43361626 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 43361580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 45403482 - 45403516
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  45403482 agtttataaagaggaggcactcctcaccttacaag 45403516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 39648952 - 39648907
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||    
T  39648952 actcttgagaagagtttataaagaggaggcaatcctcaccttacaa 39648907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 45858687 - 45858732
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||||||||||||||||||||||||| |||||||    
T  45858687 tcttgagaagagtttataaagaggaggcactcctcaccgtacaagt 45858732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 12287880 - 12287924
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||    
T  12287880 tcttgaaaagaggttataaagaggaggcactcctcaccgtacaag 12287924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 17295010 - 17295054
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  17295010 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 17295054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 27958119 - 27958075
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  27958119 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 27958075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29228480 - 29228524
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  29228480 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 29228524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 33562199 - 33562155
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||    
T  33562199 tcttgaaaagaggttataaagaggaggcactcctcaccgtacaag 33562155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 35024321 - 35024277
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttaca 59  Q
    |||||||| || |||||||||| ||||||||||||||||||||||    
T  35024321 actcttgataagagtttataaacaggaggcactcctcaccttaca 35024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 463145 - 463111
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  463145 agtttataaagaggaagcactcctcaccttacaag 463111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 2104322 - 2104288
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| |||||||||||||||||||||||||||||    
T  2104322 agtttgtaaagaggaggcactcctcaccttacaag 2104288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 10017402 - 10017360
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  10017402 actcttgataagagtttataaagaggaagcactcctcacctta 10017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 11149485 - 11149451
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  11149485 agtttataaagaggaagcactcctcaccttacaag 11149451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 11590450 - 11590496
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| ||||||||| |||||    
T  11590450 actcttgagaagagtttataaagaggaggcaatcctcacctcacaag 11590496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 15391849 - 15391895
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  15391849 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 15391895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 21638328 - 21638294
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||| ||||||||||||||||||    
T  21638328 agtttataaagaggagacactcctcaccttacaag 21638294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 24131955 - 24131909
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||| ||||||||    
T  24131955 actcttgagaagagtttataaagaggaggcaatcctcaacttacaag 24131909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 29273299 - 29273253
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||| ||||||| |||||||||||||||    
T  29273299 actcttgagaagagtttataaaggggaggcaatcctcaccttacaag 29273253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 36332154 - 36332188
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  36332154 agtttataaagaggatgcactcctcaccttacaag 36332188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 37600902 - 37600944
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||||||| ||||||||||||||||    
T  37600902 actcttgagaagagtttataaagaggcggcactcctcacctta 37600944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 40367617 - 40367651
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  40367617 agtttataaagaggaagcactcctcaccttacaag 40367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 43361831 - 43361785
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||| ||| |||||||||||||||    
T  43361831 actcttgagaagagtttataaagaggaagcaatcctcaccttacaag 43361785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 52846923 - 52846877
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  52846923 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 52846877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 21539008 - 21538963
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || | ||||||||||||||||| ||||||||||||||    
T  21539008 actcttgagaagaatttataaagaggaggcaatcctcaccttacaa 21538963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 22892495 - 22892462
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaa 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  22892495 agtttataaagaggaggcactcctcacctcacaa 22892462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 35024521 - 35024488
Alignment:
Q  28 gtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  35024521 gtttataaacaggaggcactcctcaccttacaag 35024488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 15391778 - 15391818
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacct 55  Q
    |||||||| |||||| ||||||||||||||| |||||||||    
T  15391778 actcttgagaaaagtatataaagaggaggcaatcctcacct 15391818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 25799150 - 25799194
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttaca 59  Q
    |||||||| || |||||||||||||| |||| |||||||||||||    
T  25799150 actcttgagaagagtttataaagagggggcaatcctcaccttaca 25799194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 27957881 - 27957837
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||    
T  27957881 tcttgagaaaagtttataaagaggagacgctcctcaccgtacaag 27957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 29228707 - 29228743
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcac 53  Q
    |||||| || |||||||||||||||||||||||||||    
T  29228707 tcttgagaagagtttataaagaggaggcactcctcac 29228743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 1661265 - 1661219
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  1661265 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 1661219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 7135317 - 7135271
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  7135317 actcttgagaagagtttataaagaggaggcactcctcaccttacaag 7135271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 36492617 - 36492575
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  36492617 actcttgataaaagtttataaagaggaggcactcctcacctta 36492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 37272119 - 37272073
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  37272119 actcttgataagagtttataaagaggaggcactcctcaccttacaag 37272073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 41670612 - 41670658
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||    
T  41670612 tactcttgagaagagtttataaagaggaggcactcctcaccttacaa 41670658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43288562 - 43288608
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||||    
T  43288562 actcttgacaagagtttataaagaggaggcactcctcaccttacaag 43288608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 19025512 - 19025580
Alignment:
Q  248 ggttgaaattagcaaagggctcattgtttgtctttggtgctgctgcagggtttccaaagatattccaaa 316  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||   ||| ||||||||| ||||||||    
T  19025512 ggttgaaattagcaaagggctcatgatttgtctttggtgttgcttttggggttccaaagacattccaaa 19025580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 20729124 - 20729056
Alignment:
Q  248 ggttgaaattagcaaagggctcattgtttgtctttggtgctgctgcagggtttccaaagatattccaaa 316  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||   ||| ||||||||| ||||||||    
T  20729124 ggttgaaattagcaaagggctcatgatttgtctttggtgttgcttttggggttccaaagacattccaaa 20729056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 43384352 - 43384308
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  43384352 tcttgagaagagtttataaagaggaggcactcctcaccttacaag 43384308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 22206350 - 22206307
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  22206350 tcttgagaaaagtttataaagaggaggcactcctcaccatacaa 22206307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 22228389 - 22228432
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  22228389 tcttgagaaaagtttataaagaggaggcactcctcaccatacaa 22228432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 29780177 - 29780224
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||    
T  29780177 actcttgagaagagtttataaagaggagacactcctcaccttacaagt 29780224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 6782856 - 6782902
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  6782856 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 6782902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 6783068 - 6783114
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  6783068 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 6783114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 28910074 - 28910108
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||||||||    
T  28910074 agtttataaagaggaggcactcctcaccttacaag 28910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 29252606 - 29252652
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  29252606 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 29252652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 36237832 - 36237878
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||    
T  36237832 actcttgataagagtttataaagaggaggcactcctctccttacaag 36237878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39808671 - 39808625
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  39808671 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 39808625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 257339 - 257298
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttac 58  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  257339 tcttgagaagagtttataaagaggaggcactcctcaccttac 257298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 9379030 - 9379075
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||    
T  9379030 actcttgagaagagtttataaagaggaggcaatcctcaccttacaa 9379075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 14991581 - 14991536
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||||||||||||||||||||||||| |||||||    
T  14991581 tcttgagaagagtttataaagaggaggcactcctcaccgtacaagt 14991536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 15421192 - 15421147
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || |||||||||||||||||||||||||||| |||||||    
T  15421192 tcttgagaagagtttataaagaggaggcactcctcaccgtacaagt 15421147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 43288294 - 43288339
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || |||||||||||||||||||||||||| |||||||    
T  43288294 actcttgataagagtttataaagaggaggcactcctcatcttacaa 43288339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36092671 - 36092627
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||| ||||||||||||||||||||||||||    
T  36092671 tcttgagaagagtttatagagaggaggcactcctcaccttacaag 36092627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 36495921 - 36495965
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  36495921 tcttgagaatagtttataaagaggaggcactcctcaccgtacaag 36495965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37530995 - 37530951
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||| ||||||||    
T  37530995 tcttgagaagagtttataaagaggaggcactcctcaacttacaag 37530951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 47346166 - 47346122
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  47346166 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 47346122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 47346395 - 47346351
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  47346395 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 47346351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 1663679 - 1663632
Alignment:
Q  15 actcttgaaaaaagtttataaa-gaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||| |||||||||||||||||||||||||    
T  1663679 actcttgagaagagtttataaaagaggaggcactcctcaccttacaag 1663632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 14691105 - 14691148
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || |||||||||||||||| ||||||||||||||||||    
T  14691105 cttgataagagtttataaagaggagacactcctcaccttacaag 14691148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 40121693 - 40121646
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||| ||||||||||||||||||| ||||||    
T  40121693 tactcttgagaagagtttatagagaggaggcactcctcaccctacaag 40121646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 40122014 - 40121967
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||| ||||||||||| ||||||    
T  40122014 tactcttgagaagagtttataaagaggagacactcctcaccctacaag 40121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 480227 - 480193
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| ||||||||||||||||||||||||||||    
T  480227 agtttagaaagaggaggcactcctcaccttacaag 480193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 5775924 - 5775958
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||| |||||||    
T  5775924 agtttataaagaggaggcactcctcactttacaag 5775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 6813345 - 6813311
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||| |||||    
T  6813345 agtttataaagaggaggcactcctcacctcacaag 6813311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 6960040 - 6959994
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||| |||||||||||| ||||||||||||    
T  6960040 actcttgataagagtttataacgaggaggcactcttcaccttacaag 6959994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 16565128 - 16565170
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||| ||||||||||||||||||||    
T  16565128 actcttgataagagtttataaataggaggcactcctcacctta 16565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 16600534 - 16600492
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||| ||||||||||||||||||||    
T  16600534 actcttgataagagtttataaataggaggcactcctcacctta 16600492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 31374807 - 31374841
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| |||||||||||||||    
T  31374807 agtttataaagaggaggcaatcctcaccttacaag 31374841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 34590570 - 34590600
Alignment:
Q  27 agtttataaagaggaggcactcctcacctta 57  Q
    |||||||||||||||||||||||||||||||    
T  34590570 agtttataaagaggaggcactcctcacctta 34590600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 39808538 - 39808496
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  39808538 actcttgagaagagtttataaagaggaggcaatcctcacctta 39808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 40703473 - 40703439
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||||||||||||| |||||    
T  40703473 agtttataaagaggaggcactcctcacctcacaag 40703439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 43167967 - 43167925
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||||||||||| |||||||||||    
T  43167967 actcttgagaagagtttataaagaggaggcaatcctcacctta 43167925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 44760569 - 44760535
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||||| ||||    
T  44760569 agtttataaagaggaggcactcctcacctttcaag 44760535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 47856065 - 47856023
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||||||||||||||||| |||||||    
T  47856065 actcttgataagagtttataaagaggaggcactccccacctta 47856023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 36495698 - 36495735
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    |||||| || ||||||||||||||||||||||||||||    
T  36495698 tcttgagaatagtttataaagaggaggcactcctcacc 36495735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 27585288 - 27585332
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||| ||||||||||||||||| ||||||    
T  27585288 tcttgagaagagtttataaaaaggaggcactcctcaccgtacaag 27585332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 34748810 - 34748854
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||||||||||||||||||| |||||||| ||||||    
T  34748810 tcttgagaagagtttataaagaggaggcattcctcaccgtacaag 34748854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36092464 - 36092420
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||| |||||||| |||||||||||||||||    
T  36092464 tcttgagaagagtttatagagaggaggtactcctcaccttacaag 36092420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37756010 - 37755966
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  37756010 tcttgagaagagtttataaagaggaggcactcttcaccgtacaag 37755966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37756236 - 37756192
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  37756236 tcttgagaagagtttataaagaggaggcactcttcaccgtacaag 37756192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 37761984 - 37761940
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  37761984 tcttgagaagagtttataaagaggaggcactcttcaccgtacaag 37761940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 48385 - 48339
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||    
T  48385 actcttgagaaaagtttataaagaggaggcaatcctcaccttacaag 48339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 1028167 - 1028122
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  1028167 actcttgagaagagtttataaagaggaggcactcctcaccttacaa 1028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 29396415 - 29396371
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  29396415 tcttgagaaaagtttataaagaggaggcactcctcaccgtacaag 29396371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 33040095 - 33040139
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||    
T  33040095 tcttgaaaagagtttatatagaggaggcactcctcaccttacaag 33040139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 13843726 - 13843773
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||    
T  13843726 tactcttgagaagagtttataaagaggaggcgctcctcaccttacaag 13843773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 48178 - 48132
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  48178 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 48132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 2908636 - 2908590
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  2908636 actcttgagaatagtttataaagaggaggcaatcctcaccttacaag 2908590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 13413614 - 13413660
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  13413614 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 13413660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 13844042 - 13844088
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcaccttacaa 60  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||    
T  13844042 tactcttgagaagagtttataaagaggaggcacttctcaccttacaa 13844088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 28156268 - 28156314
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  28156268 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 28156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 29432442 - 29432488
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||||| |||||||||||||    
T  29432442 actcttgataagagtttataaagaggaggcacttctcaccttacaag 29432488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 35527062 - 35527016
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  35527062 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 35527016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 37995708 - 37995662
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  37995708 actcttgagaagagtttataaagaggaggcattcctcaccttacaag 37995662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 38663277 - 38663323
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||||||||| ||||||||||||    
T  38663277 actcttgataagagtttataaagaggaggcactcgtcaccttacaag 38663323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 84106 - 84062
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||||| ||||||    
T  84106 tcttgagaagagtttataaagaggaggcactcctcaccgtacaag 84062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 22196401 - 22196361
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcacc 54  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  22196401 tactcttgagaagagtttataaagaggaggcactcctcacc 22196361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 2716372 - 2716415
Alignment:
Q  14 tactcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||    
T  2716372 tactgttgataaaagtttataaagaggagacactcctcacctta 2716415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 4296739 - 4296692
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||| ||||||||||||||| ||||||||||||||||    
T  4296739 actcttgagaagagtatataaagaggaggcaatcctcaccttacaagt 4296692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 18914235 - 18914188
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| ||||||||||||| ||||| || ||||||||||||||||    
T  18914235 actcttgagaaaagtttataaaaaggagacaatcctcaccttacaagt 18914188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24918194 - 24918237
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || ||||||||||||||||||||| |||||||||||||    
T  24918194 cttgagaagagtttataaagaggaggcactactcaccttacaag 24918237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24994102 - 24994145
Alignment:
Q  18 cttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||| || ||||||||||||||||||||| |||||||||||||    
T  24994102 cttgagaagagtttataaagaggaggcactactcaccttacaag 24994145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 873770 - 873724
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||| |||||||||| |||||||||||||||    
T  873770 actcttgagaagagtttatagagaggaggcattcctcaccttacaag 873724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 2471755 - 2471721
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||||||||||| ||||||    
T  2471755 agtttataaagaggaggcactcctcaccgtacaag 2471721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 2716576 - 2716618
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || ||||||||| |||||||||||||||||||||    
T  2716576 actcttgataagagtttataaggaggaggcactcctcacctta 2716618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 2908831 - 2908797
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| |||||||||||||||    
T  2908831 agtttataaagaggaggcaatcctcaccttacaag 2908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 3762936 - 3762982
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| || ||||||||||||    
T  3762936 actcttgagaagagtttataaagaggaggcaatcttcaccttacaag 3762982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 12965308 - 12965274
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||| |||||||||||||||||||    
T  12965308 agtttataaagaggaagcactcctcaccttacaag 12965274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 15510578 - 15510532
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| ||||||||| |||||    
T  15510578 actcttgagaagagtttataaagaggaggcaatcctcacctcacaag 15510532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 18107863 - 18107905
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || | |||||||||||||||||||||||||||||    
T  18107863 actcttgataagaatttataaagaggaggcactcctcacctta 18107905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 18914442 - 18914396
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| ||||||||||||| ||||| || |||||||||||||||    
T  18914442 actcttgagaaaagtttataaaaaggagacaatcctcaccttacaag 18914396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 20811484 - 20811530
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || | ||||||||||||||||||||| |||||||||||    
T  20811484 actcttgagaagattttataaagaggaggcactccacaccttacaag 20811530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 20837839 - 20837885
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || | ||||||||||||||||||||| |||||||||||    
T  20837839 actcttgagaagattttataaagaggaggcactccacaccttacaag 20837885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 24792188 - 24792150
Alignment:
Q  23 aaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  24792188 aaaaagtttataaagaggagacactcctcaccgtacaag 24792150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 27760105 - 27760151
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||    
T  27760105 actcttgagaagagtttctaaagaagaggcactcctcaccttacaag 27760151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 28010190 - 28010144
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || || | ||||||||||||||||||||||||||||||    
T  28010190 actcttgagaagagctaataaagaggaggcactcctcaccttacaag 28010144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 28156072 - 28156106
Alignment:
Q  27 agtttataaagaggaggcactcctcaccttacaag 61  Q
    ||||||||||||||||||| |||||||||||||||    
T  28156072 agtttataaagaggaggcaatcctcaccttacaag 28156106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 28358109 - 28358063
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| || |||||||||||||||    
T  28358109 actcttgagaagagtttataaagaggagacaatcctcaccttacaag 28358063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34457126 - 34457172
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||| ||| |||||||||||||||    
T  34457126 actcttgagaagagtttataaagaggatgcaatcctcaccttacaag 34457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 37656806 - 37656760
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  37656806 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 37656760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 37781918 - 37781872
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||    
T  37781918 actcttgagaagagtatataaagaggaggcaatcctcaccttacaag 37781872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 38131794 - 38131840
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| || |||||||||||||||    
T  38131794 actcttgagaagagtttataaagaggagacattcctcaccttacaag 38131840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 38376761 - 38376807
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||||||||||| || |||||||||||||||    
T  38376761 actcttgagaagagtttataaagaggagacaatcctcaccttacaag 38376807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 39268048 - 39268090
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacctta 57  Q
    |||||||| || |||||||||| ||||||||||||||||||||    
T  39268048 actcttgataagagtttataaataggaggcactcctcacctta 39268090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 30329868 - 30329913
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||| || ||||||||||||||||| |||||||||| |||||||    
T  30329868 tcttgagaagagtttataaagaggaggaactcctcaccgtacaagt 30329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 83882 - 83839
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||    
T  83882 tcttgagaaaagtttataaagaggaggcact-ctcaccgtacaag 83839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 1892150 - 1892118
Alignment:
Q  29 tttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||| ||||||||||||||||    
T  1892150 tttataaagaggaggccctcctcaccttacaag 1892118  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 17135549 - 17135589
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcacct 55  Q
    |||||||| || |||||||||||||||| ||||||||||||    
T  17135549 actcttgataagagtttataaagaggagacactcctcacct 17135589  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 18541754 - 18541798
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||||||| | ||||||    
T  18541754 tcttgagaatagtttataaagaggaggcactcctcaacctacaag 18541798  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 30330093 - 30330137
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||    
T  30330093 tcttgagaagagtatataaagaggaggcactcctcaccgtacaag 30330137  T

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Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 32395386 - 32395350
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcac 53  Q
    |||||| || |||||||||||||||||||||||||||    
T  32395386 tcttgagaagagtttataaagaggaggcactcctcac 32395350  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 21337 - 21290
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaagt 62  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||    
T  21337 actcttgagaagagtttataaagaggaggcaatcctcaccttacaagt 21290  T

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Target: scaffold0434 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 13336 - 13382
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  13336 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 13382  T

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Target: scaffold0434; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 13543 - 13589
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  13543 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 13589  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 76882 - 76928
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  76882 actcttgagaagagtttataaagaggaggcaatcctcaccttacaag 76928  T

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Target: scaffold1138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 2153 - 2107
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || |||||||| |||||||||| |||||||||||||||    
T  2153 actcttgataagagtttatatagaggaggcaatcctcaccttacaag 2107  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 3021 - 2975
Alignment:
Q  15 actcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||| || ||||||||||||||||||| ||||||| |||||||    
T  3021 actcttgagaagagtttataaagaggaggcaatcctcactttacaag 2975  T

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Target: scaffold0166 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 34571 - 34533
Alignment:
Q  23 aaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  34571 aaaaagtttataaagaggagacactcctcaccgtacaag 34533  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 165816 - 165860
Alignment:
Q  17 tcttgaaaaaagtttataaagaggaggcactcctcaccttacaag 61  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  165816 tcttgagaagagtttataaagaggaggcactcttcaccgtacaag 165860  T

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