View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2288_low_11 (Length: 267)
Name: NF2288_low_11
Description: NF2288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2288_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 13590964 - 13591205
Alignment:
| Q |
19 |
tggacaaaatataataaaatagaggaatatcacatgttcggttcttcggtggtttgtgtgaattgtgctctaagttgcaatatattatttgtacaaaaaa |
118 |
Q |
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| T |
13590964 |
tggacaaaatataataaaatagaggaatatcacatgttcggttctttggtggtttgtgtgaattgtgctctaagttacaatatattttttgtacaaaaaa |
13591063 |
T |
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| Q |
119 |
tatataggataannnnnnnnnnnnngagtgaatatagtataattatttgatactaaaaaatacccagaaagaattagttggacttgggttgtttgcatag |
218 |
Q |
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| T |
13591064 |
tatataagataagtttttttttttt-agtgaatataggataattatttgatactaaaaaatacccagaaagaattagttggacttgggttgtttgcatag |
13591162 |
T |
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| Q |
219 |
ttactaaatatgtgtttttattcaaaataccaagaataatcta |
261 |
Q |
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| T |
13591163 |
ttactaaatatgtgtttttattcaaaataccaagaaaaatcta |
13591205 |
T |
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