View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2291_low_6 (Length: 276)

Name: NF2291_low_6
Description: NF2291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2291_low_6
NF2291_low_6
[»] chr8 (19 HSPs)
chr8 (47-229)||(16105913-16106095)
chr8 (49-229)||(16113155-16113335)
chr8 (49-230)||(16101519-16101694)
chr8 (154-226)||(30971285-30971357)
chr8 (154-230)||(30972002-30972078)
chr8 (168-230)||(42757602-42757664)
chr8 (168-230)||(23220004-23220066)
chr8 (159-228)||(5152454-5152523)
chr8 (180-230)||(1274129-1274179)
chr8 (154-226)||(1636848-1636920)
chr8 (168-228)||(12836696-12836756)
chr8 (158-230)||(32744006-32744078)
chr8 (168-230)||(18573510-18573572)
chr8 (168-226)||(23220888-23220946)
chr8 (181-227)||(3743129-3743175)
chr8 (167-221)||(42758412-42758466)
chr8 (178-226)||(28966538-28966586)
chr8 (154-198)||(37730908-37730952)
chr8 (154-230)||(37731860-37731934)
[»] chr4 (26 HSPs)
chr4 (46-226)||(31689177-31689358)
chr4 (47-230)||(12206760-12206944)
chr4 (93-229)||(12210853-12210989)
chr4 (154-227)||(31914522-31914595)
chr4 (158-229)||(23089270-23089341)
chr4 (154-227)||(20627526-20627599)
chr4 (158-227)||(31135169-31135238)
chr4 (158-230)||(23088272-23088344)
chr4 (154-229)||(31135894-31135969)
chr4 (167-230)||(31908362-31908425)
chr4 (154-230)||(34837967-34838043)
chr4 (159-228)||(12921863-12921932)
chr4 (154-230)||(11791357-11791433)
chr4 (152-227)||(6311778-6311853)
chr4 (159-227)||(41164169-41164237)
chr4 (166-226)||(48314367-48314427)
chr4 (152-230)||(6310815-6310893)
chr4 (154-229)||(34836747-34836822)
chr4 (159-218)||(34978352-34978411)
chr4 (166-226)||(48315193-48315253)
chr4 (159-229)||(12921126-12921196)
chr4 (154-223)||(11792314-11792383)
chr4 (158-218)||(20628338-20628398)
chr4 (158-218)||(54501642-54501702)
chr4 (159-218)||(42523886-42523945)
chr4 (168-230)||(50432825-50432887)
[»] chr3 (21 HSPs)
chr3 (49-229)||(29032696-29032875)
chr3 (65-224)||(17619051-17619210)
chr3 (53-213)||(17615035-17615195)
chr3 (101-230)||(54285758-54285887)
chr3 (154-229)||(4300930-4301005)
chr3 (164-230)||(27359841-27359907)
chr3 (163-230)||(28422850-28422917)
chr3 (159-230)||(40929858-40929929)
chr3 (148-227)||(33148289-33148368)
chr3 (152-229)||(33147329-33147406)
chr3 (166-230)||(27317483-27317547)
chr3 (154-230)||(27473853-27473929)
chr3 (162-226)||(51341874-51341938)
chr3 (168-226)||(39644540-39644598)
chr3 (168-229)||(39645379-39645440)
chr3 (184-228)||(8652108-8652152)
chr3 (154-230)||(27474876-27474952)
chr3 (182-226)||(2841230-2841274)
chr3 (168-221)||(8653987-8654040)
chr3 (148-188)||(1602477-1602517)
chr3 (158-229)||(2840201-2840271)
[»] chr1 (15 HSPs)
chr1 (148-230)||(42026892-42026974)
chr1 (148-230)||(42031683-42031765)
chr1 (148-230)||(16801969-16802051)
chr1 (159-230)||(17239407-17239478)
chr1 (154-230)||(34267972-34268048)
chr1 (167-230)||(17238593-17238656)
chr1 (158-226)||(16802682-16802750)
chr1 (154-230)||(34269080-34269156)
chr1 (154-230)||(34275315-34275391)
chr1 (154-226)||(24790846-24790918)
chr1 (244-276)||(3268673-3268705)
chr1 (158-226)||(34361210-34361278)
chr1 (166-230)||(48572817-48572881)
chr1 (100-132)||(42026989-42027021)
chr1 (100-132)||(42031636-42031668)
[»] chr7 (12 HSPs)
chr7 (148-230)||(5995249-5995331)
chr7 (158-230)||(5997611-5997683)
chr7 (158-230)||(41970884-41970956)
chr7 (158-227)||(27268242-27268311)
chr7 (166-230)||(45550994-45551058)
chr7 (168-230)||(38887327-38887389)
chr7 (166-228)||(45551813-45551875)
chr7 (159-222)||(1409380-1409443)
chr7 (158-227)||(27258107-27258177)
chr7 (168-226)||(28778109-28778167)
chr7 (168-228)||(47552509-47552569)
chr7 (171-228)||(27875931-27875988)
[»] chr6 (15 HSPs)
chr6 (158-229)||(19237603-19237674)
chr6 (148-226)||(17280689-17280767)
chr6 (148-230)||(17279880-17279962)
chr6 (153-228)||(29375038-29375113)
chr6 (178-226)||(8683876-8683924)
chr6 (154-230)||(10793575-10793651)
chr6 (158-230)||(5860546-5860618)
chr6 (154-230)||(10792479-10792555)
chr6 (154-230)||(8238065-8238141)
chr6 (155-227)||(7001770-7001842)
chr6 (158-229)||(28522618-28522689)
chr6 (168-226)||(12441716-12441774)
chr6 (159-229)||(25359496-25359566)
chr6 (168-230)||(28523366-28523428)
chr6 (168-213)||(5860490-5860535)
[»] chr5 (4 HSPs)
chr5 (154-230)||(33471161-33471237)
chr5 (165-230)||(22671603-22671667)
chr5 (159-226)||(33471854-33471921)
chr5 (168-229)||(30667861-30667922)
[»] scaffold0015 (1 HSPs)
scaffold0015 (163-229)||(45330-45396)
[»] chr2 (11 HSPs)
chr2 (154-227)||(16591522-16591595)
chr2 (154-228)||(18767565-18767639)
chr2 (168-230)||(39240864-39240926)
chr2 (158-219)||(9244251-9244312)
chr2 (158-230)||(45631139-45631211)
chr2 (158-226)||(5483914-5483982)
chr2 (159-230)||(9243990-9244061)
chr2 (154-218)||(29558160-29558223)
chr2 (180-230)||(32667406-32667456)
chr2 (154-230)||(18236653-18236729)
chr2 (158-228)||(18237623-18237693)
[»] scaffold0676 (1 HSPs)
scaffold0676 (168-220)||(3168-3220)
[»] scaffold0112 (3 HSPs)
scaffold0112 (184-226)||(24728-24770)
scaffold0112 (168-226)||(35003-35061)
scaffold0112 (181-230)||(35816-35865)
[»] scaffold0006 (1 HSPs)
scaffold0006 (159-230)||(162459-162530)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 16105913 - 16106095
Alignment:
Q  47 gtgaccttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnnc 146  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |    
T  16105913 gtgaccttcagaattctgggggaagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcaaaaaacaaaaac 16106012  T
Q  147 gtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16106013 gtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 16106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 16113155 - 16113335
Alignment:
Q  49 gaccttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgt 148  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||    
T  16113155 gaccttcagaattctgggggaagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcaaaaaacaaaaacgt 16113254  T
Q  149 gggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16113255 gggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 16113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 230
Target Start/End: Complemental strand, 16101694 - 16101519
Alignment:
Q  49 gaccttcagaattttgggggaaggaaa-aaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncg 147  Q
    ||||||||||||| ||||||||| ||| |||||||||||||       ||||||||||| ||||||||||| ||||||||||||||            ||    
T  16101694 gaccttcagaattctgggggaagaaaagaaaggaaaattaa-------ttgaaattaccattttacccttcggttttaatttcctcaaaaaacaaaaacg 16101602  T
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16101601 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgtgtctattgtagcaaacccc 16101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 30971357 - 30971285
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30971357 tttgtgtccaagtgaaaaagtgatggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 30971285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 30972002 - 30972078
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30972002 tttgtgtccaaatgaaaaggtgttggttgctaaaatagaccttcatgaaattgagtgggtctattgtagcaaacccc 30972078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 42757664 - 42757602
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  42757664 aaaaggtgcagcttgctaaaataaaccttcataaaaatgagtgggtctattgtagcaaacccc 42757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 23220066 - 23220004
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  23220066 aaaaggtgcagcttgctaaaatagaccttcataaaaaagggtgggtctattgtagcaaacccc 23220004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 5152454 - 5152523
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||||| |||||||||||   |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  5152454 gtccaaatgaaaaggtgccacttgctaaaatagaccttcataaaaatgagcgggtctattgtagcaaacc 5152523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 1274129 - 1274179
Alignment:
Q  180 ttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1274129 ttgctaaaatagaccttcatgaaaataagttggtctattgtagcaaacccc 1274179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 1636920 - 1636848
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||| ||||||| ||  |||||| |||||||| |||||||||||||||||  ||||||||||||||    
T  1636920 tttgtgtccaaatgaaaagatgttggttgcaaaaatagatcttcatgaaaatgagtgaatctattgtagcaaa 1636848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 12836756 - 12836696
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    ||||||||||  |||||||||||||||||||||||||   |||||||||||||||||||||    
T  12836756 aaaaggtgcaccttgctaaaatagaccttcatgaaaaaatgtgggtctattgtagcaaacc 12836696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 32744078 - 32744006
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||||||| |  ||||| |||||||||||||    
T  32744078 tgtccacgtgaaaaggtgttggttgctaaaatagaccttcataaaaatgaataagtctactgtagcaaacccc 32744006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 18573572 - 18573510
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatg-aaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18573572 aaaaggtgcatcttgctaaaatagaccttcatgtaaaatg-gtgggtctattgtagcaaacccc 18573510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 23220888 - 23220946
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||| |||||||||||||||||||| |||| | | |||||||||||||||||    
T  23220888 aaaaggtgcagcttgctaaaatagaccttcataaaaaagggagggtctattgtagcaaa 23220946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 3743175 - 3743129
Alignment:
Q  181 tgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||    
T  3743175 tgctaaaatagaccttcataaaaatgaggggatctattgtagcaaac 3743129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 42758412 - 42758466
Alignment:
Q  167 gaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgta 221  Q
    ||||| |||||| ||||||||||||||||||||   |||||||||||||||||||    
T  42758412 gaaaatgtgcagcttgctaaaatagaccttcatattaatgagtgggtctattgta 42758466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 28966538 - 28966586
Alignment:
Q  178 ggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||||||| |||||| ||||||||| ||| ||||||||||||    
T  28966538 ggttgctaaaatagaacttcataaaaatgagttggtttattgtagcaaa 28966586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 37730952 - 37730908
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttca 198  Q
    |||||||||||  |||||||||||  |||||||||||||||||||    
T  37730952 tttgtgtccaaaggaaaaggtgcatcttgctaaaatagaccttca 37730908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 37731860 - 37731934
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||  ||||||||| |  ||||||||||| |||||||  ||||| || |||||||||||||||||||||    
T  37731860 tttgtgtccaaaggaaaaggtgtatcttgctaaaatacaccttca-caaaat-agagggtctattgtagcaaacccc 37731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 31689358 - 31689177
Alignment:
Q  46 cgtgaccttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnn 145  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||                
T  31689358 cgtgaccttcagaattctgggggaagaaaaaaaggaaaattaaaagttaattgaaattaccattttacccttcagttttaatttcctcaaaaaaacaaaa 31689259  T
Q  146 -cgtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31689258 acgtgggcatttgtgtccgagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 31689177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 12206944 - 12206760
Alignment:
Q  47 gtgaccttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctc-nnnnnnnnnnnn 145  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  12206944 gtgaccttcagaattctgggggaagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcaaaaaaacaaaaa 12206845  T
Q  146 cgtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12206844 tgtggccatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcataaaaatgagtgggtctattgtagcaaacccc 12206760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 12210853 - 12210989
Alignment:
Q  93 taattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaataga 192  Q
    ||||||||||||||||||||||||||| |||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||    
T  12210853 taattgaaattaccgttttacccttcaattttaatttcctcaaaaaacaaaaatgtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaataga 12210952  T
Q  193 ccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||| |||||||||||||||||||    
T  12210953 ccttcatgaaaatgagttggtctattgtagcaaaccc 12210989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 31914595 - 31914522
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31914595 tttgtgtccaagtgaaaaggtgctggttgctaaaatagatcttcatgaaaatgagtgggtctattgtagcaaac 31914522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 23089270 - 23089341
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23089270 tgtccaagtgaaaaggtgttggttgctaaaatagacctacatgaaaatgagtgggtctattgtagcaaaccc 23089341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 20627599 - 20627526
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20627599 tttgtgtccaagtgaaaaggtgttgggtgctaaaatagactttcatgaaaatgagtgggtctattgtagcaaac 20627526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 31135238 - 31135169
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31135238 tgtccaagtgaaaaggtgttggttgctaaaatagaccttcatgaaaatgagttggtctattgtagcaaac 31135169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 23088344 - 23088272
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23088344 tgtcgaagtgagaaggtgttggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 23088272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 31135894 - 31135969
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||| ||| ||| |||||||||||||||||    
T  31135894 tttgtgtccaagtgaaaaggtgttggttgctaaaatacaccttcatgaaattgaatggatctattgtagcaaaccc 31135969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 31908362 - 31908425
Alignment:
Q  167 gaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31908362 gaaaaggtgcaacttgctaaaatagaccttcataaaaatgagtgggtctattgtagcaaacccc 31908425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 34837967 - 34838043
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| |||||| |||  ||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  34837967 tttgtgtccaattgaaaaagtgttggttgctaaaataaaacttcataaaaatgagtgggtctattgtagcaaacccc 34838043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 12921863 - 12921932
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaacc 228  Q
    |||||| ||||||||||| || ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  12921863 gtccaaatgaaaaggtgctggatgctaaaatagaccttcat-aaaatgaagtgggtctattgtagcaaacc 12921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 11791433 - 11791357
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaacccc 230  Q
    |||||||||||||||||||||   | |||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  11791433 tttgtgtccaagtgaaaaggtattgcttgctaaaatagacattcat-aaaatgaagtgggtctattgtagcaaacccc 11791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 6311778 - 6311853
Alignment:
Q  152 catttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaac 227  Q
    ||||| ||||||| ||||||||||||  ||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  6311778 catttatgtccaaatgaaaaggtgcaccttgctaaaatagaccttcatg-aaatgaggtgggtctattatagcaaac 6311853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 41164169 - 41164237
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||| |||  |||||||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  41164169 gtccaagtgaaaatgtgttggttgctaaaatagactttcataaaaatgaatgggtctactgtagcaaac 41164237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 48314427 - 48314367
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||  | |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  48314427 tgaaaaggtgttgcttgctaaaatagactttcatgaaaatgagtgggtctattgcagcaaa 48314367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 6310893 - 6310815
Alignment:
Q  152 catttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaacccc 230  Q
    ||||| ||||||||||||||||||||  || |||||||||||||||||| |||||| |||| |||||||||| |||||||    
T  6310893 catttatgtccaagtgaaaaggtgcaccttcctaaaatagaccttcatg-aaatgaggtggatctattgtagtaaacccc 6310815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 34836822 - 34836747
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    |||| |||||| ||||||| ||  ||||| |||||||||||||||| ||||| |||||||||||||||| ||||||    
T  34836822 tttgggtccaattgaaaagatgttggttgataaaatagaccttcataaaaataagtgggtctattgtagaaaaccc 34836747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 34978411 - 34978352
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctatt 218  Q
    |||||| ||||||||||  ||||| |||||||||||||||| ||||||||||||||||||    
T  34978411 gtccaattgaaaaggtgttggttgataaaatagaccttcataaaaatgagtgggtctatt 34978352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 48315193 - 48315253
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||  | ||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  48315193 tgaaaaggtgttgcttgctaaaataaacctttatgaaaataagtgggtctattgtagcaaa 48315253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 12921196 - 12921126
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaaccc 229  Q
    |||||| ||||||||||| || |||||||||| |||||||| ||||||| ||| ||||||||||||||||||    
T  12921196 gtccaaatgaaaaggtgctggatgctaaaataaaccttcat-aaaatgaagtgcgtctattgtagcaaaccc 12921126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 11792314 - 11792383
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagc 223  Q
    |||||||||||||| ||||||| || |||||||||||||||||||| ||| || |||| ||||||||||||    
T  11792314 tttgtgtccaagtgtaaaggtgtagcttgctaaaatagaccttcat-aaactgaagtgcgtctattgtagc 11792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 20628338 - 20628398
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctatt 218  Q
    ||||| ||||||||||||  | ||| |||||||||||||||| |||||| |||||||||||    
T  20628338 tgtcctagtgaaaaggtgttgcttggtaaaatagaccttcataaaaatgggtgggtctatt 20628398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 54501642 - 54501702
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctatt 218  Q
    ||||||||| |||| |||  |||||||||| ||||||||||| |||||||||| |||||||    
T  54501642 tgtccaagtaaaaatgtgttggttgctaaattagaccttcataaaaatgagtgagtctatt 54501702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 42523886 - 42523945
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctatt 218  Q
    |||||||||||||||||    ||||||||| |||| |||||||||||||||| |||||||    
T  42523886 gtccaagtgaaaaggtgttacttgctaaaacagactttcatgaaaatgagtgagtctatt 42523945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 50432825 - 50432887
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| |||||||||| ||||||||| ||||   ||||||||||| || ||||||||    
T  50432825 aaaaggtgcagcttgctaaaatggaccttcataaaaagatgtgggtctattataacaaacccc 50432887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 29032696 - 29032875
Alignment:
Q  49 gaccttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgt 148  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||    
T  29032696 gaccttcagagttctgggggaagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcaaaaaacaaaaatgt 29032795  T
Q  149 gggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  29032796 gggcatttgtgtccaagtg-aaaggtacaggttgctaaaatagaccttcataaaaatgaatgggtctattgtagcaaaccc 29032875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 17619051 - 17619210
Alignment:
Q  65 ggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgtgggcatttgtgtccaa 164  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||    
T  17619051 ggggaagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctaaaaaaacataaacgtgggcatttgtgtccaa 17619150  T
Q  165 gtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagca 224  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17619151 gtgaaaaggtactggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagca 17619210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 17615195 - 17615035
Alignment:
Q  53 ttcagaattttgggggaaggaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgtgggc 152  Q
    |||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||| |||    
T  17615195 ttcagagttctggggggagaaaaaaaggaaaattaaaagttaattgaaattaccgttttacccttcagttttaatttcctcaaaaaacaaaaacgttggc 17615096  T
Q  153 atttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggt 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17615095 atttgtgtccaagtgaaaaggtgcaagttgctaaaatagaccttcataaaaatgagtgggt 17615035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 54285758 - 54285887
Alignment:
Q  101 attaccgttttacccttcagttttaatttcctcnnnnnnnnnnnncgtgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatg 200  Q
    |||||||||||||||||||||||||||||||||            ||||||||||||||||||| |||||||||| |||||||||||||||||||||||     
T  54285758 attaccgttttacccttcagttttaatttcctcaaaaaacaaaaacgtgggcatttgtgtccaaatgaaaaggtgtaggttgctaaaatagaccttcata 54285857  T
Q  201 aaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||||||||||||||    
T  54285858 aaaatgagtgggtctattgtagcaaacccc 54285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 4301005 - 4300930
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4301005 tttgtgtccaagtgaaaaggtgttggttgctaaaatagatcttcatgaaaataagtgggtctattgtagcaaaccc 4300930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 27359841 - 27359907
Alignment:
Q  164 agtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27359841 agtgaaaaggtgttgtttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 27359907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 28422850 - 28422917
Alignment:
Q  163 aagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  28422850 aagtgaaaaggtgatggttgctaaaatagactttcataaaaatgagtgggtctattgtagcaaacccc 28422917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 40929858 - 40929929
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||| ||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  40929858 gtccaaatgaaaaggtgttggttgctaaaataaaccttcataaaaatgagtgggtctattgtagcaaacccc 40929929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 33148289 - 33148368
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaac 227  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  33148289 tgggcatttatgtccaagtgaaaaggtgcaccttgctaaaatagaccttcat-aaaatgaggtgggtttattgtagcaaac 33148368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 33147406 - 33147329
Alignment:
Q  152 catttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaaccc 229  Q
    ||||| ||||||||||||||||||||  ||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  33147406 catttatgtccaagtgaaaaggtgcatcttgctaaaatagatcttcatg-aaatgaggtgggtctattgtagcaaaccc 33147329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 27317483 - 27317547
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  | ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  27317483 tgaaaaggtgttgcttgctaaaataaaccttcatgaaaatgagcgggtctattgtagcaaacccc 27317547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 27473929 - 27473853
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||  |||||||||||  |||||||||||||||||||  |||  |||||||||||||||||||||||||    
T  27473929 tttgtgtccaaaggaaaaggtgcatcttgctaaaatagaccttcacaaaatagagtgggtctattgtagcaaacccc 27473853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 51341938 - 51341874
Alignment:
Q  162 caagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||| ||||||||  ||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  51341938 caagtaaaaaggtgttggttgttaaaatagaccttcatgagaatgagtaggtctattgtagcaaa 51341874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 39644598 - 39644540
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||| |||||||||| ||||||||||||||   |||||||||||||||||||    
T  39644598 aaaaggtgcagcttgctaaaatggaccttcatgaaaagaggtgggtctattgtagcaaa 39644540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 39645379 - 39645440
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||| ||| |||||||||| ||||||||| ||||   ||||||||||||||||||||||    
T  39645379 aaaaggtacagcttgctaaaatggaccttcataaaaagaggtgggtctattgtagcaaaccc 39645440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 8652152 - 8652108
Alignment:
Q  184 taaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  8652152 taaaatagaccttcatgaaaagaggtgggtctattgtagcaaacc 8652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 27474876 - 27474952
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||   |||||||| |  |||||||||||||| ||||  |||  |||||||||||||||||||||||||    
T  27474876 tttgtgtccaaagaaaaaggtgtatcttgctaaaatagacgttcacaaaatagagtgggtctattgtagcaaacccc 27474952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 2841230 - 2841274
Alignment:
Q  182 gctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaa 226  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  2841230 gctaaaatagaccttcat-aaaatgaagtgggtctattgtagcaaa 2841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 8653987 - 8654040
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgta 221  Q
    ||||||||||  ||| ||||||| ||||||||||||||  ||||||||||||||    
T  8653987 aaaaggtgcactttgttaaaataaaccttcatgaaaataggtgggtctattgta 8654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 1602517 - 1602477
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaa 188  Q
    |||||||||||||| |||||||||||||  |||||||||||    
T  1602517 tgggcatttgtgtcaaagtgaaaaggtgttggttgctaaaa 1602477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 2840271 - 2840201
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaaccc 229  Q
    ||||||| | ||||||||| || ||||||||||||| || || ||||||| ||||||||||||||||||||||    
T  2840271 tgtccaaataaaaaggtgctggatgctaaaatagacttt-at-aaaatgaagtgggtctattgtagcaaaccc 2840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 42026974 - 42026892
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42026974 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 42026892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 42031683 - 42031765
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42031683 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 42031765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 16802051 - 16801969
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||| |||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16802051 tgggtatttttgtccaagtgaaaaggtgccccttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 16801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 17239407 - 17239478
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17239407 gtccaaatgaaaaggtgctacttgctaaaatagaccttcataaaaatgagtgggtctattgtagcaaacccc 17239478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 34268048 - 34267972
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||||||  | ||||||||||||||||| || |||  |||||||||||||||||||||||||    
T  34268048 tttgtgtccaagtgaaaaggtgttgcttgctaaaatagaccttgataaaatggagtgggtctattgtagcaaacccc 34267972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 17238656 - 17238593
Alignment:
Q  167 gaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17238656 gaaaaggtgctacttgctaaaatagaccttcataaaaatgagtgggtctattgtagcaaacccc 17238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 16802682 - 16802750
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||||||||| |   ||||||||||||||||| || ||||||||||||||||||||||||||    
T  16802682 tgtccaagtgaaaaggtacttcttgctaaaatagacctttataaaaatgagtgggtctattgtagcaaa 16802750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 34269080 - 34269156
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  34269080 tttgtgtccaaatgaaaaggtgttgcttgctaaaatagaccttcataaaatggaatgggtctattgtagcaaacccc 34269156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 34275315 - 34275391
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  34275315 tttgtgtccaaatgaaaaggtgttgcttgctaaaatagaccttcataaaatggaatgggtctattgtagcaaacccc 34275391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 24790846 - 24790918
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaa 226  Q
    |||||||||||||||||| |||  | || ||||||||||||||||| |||||| ||||||||||||||||||||    
T  24790846 tttgtgtccaagtgaaaaagtgttgctttctaaaatagaccttcat-aaaatgaagtgggtctattgtagcaaa 24790918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 3268673 - 3268705
Alignment:
Q  244 tctcctgatttaagacataggtcaatggtttca 276  Q
    |||||||||||||||||||||||||||||||||    
T  3268673 tctcctgatttaagacataggtcaatggtttca 3268705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 34361278 - 34361210
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||| |||||| |  ||||||||||||| |||||||| ||||| ||||| |||||| |||||||    
T  34361278 tgtccaagtcaaaaggcgttggttgctaaaataaaccttcataaaaataagtggttctattatagcaaa 34361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 48572817 - 48572881
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||| | |||||||||||||||| |  ||||   |||||||||||||||||||||||    
T  48572817 tgaaaaggtgcatgatgctaaaatagaccttaacaaaaagaggtgggtctattgtagcaaacccc 48572881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 42027021 - 42026989
Alignment:
Q  100 aattaccgttttacccttcagttttaatttcct 132  Q
    ||||||||||||||||||| |||||||||||||    
T  42027021 aattaccgttttacccttccgttttaatttcct 42026989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 42031636 - 42031668
Alignment:
Q  100 aattaccgttttacccttcagttttaatttcct 132  Q
    ||||||||||||||||||| |||||||||||||    
T  42031636 aattaccgttttacccttccgttttaatttcct 42031668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 5995331 - 5995249
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5995331 tgggcatttgtgtccaaatgaaaaggtgttggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 5995249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 5997611 - 5997683
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5997611 tgtccaagtgaaaaggtgctggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 5997683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 41970956 - 41970884
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41970956 tgtccaagtgaaaaggtgttggttgctaaaatagatcttcatgaaaatgagtgggtctattgtagcaaacccc 41970884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 27268242 - 27268311
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  27268242 tgtccaagtgaaaaggtgctgattgctaaaatagaccttcatgaaaatgagtggatctattgtatcaaac 27268311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 45551058 - 45550994
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45551058 tgaaaaggtgttggttgctaaaatagaccttcatgaaattgagtgggtctattgtagcaaacccc 45550994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 38887389 - 38887327
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38887389 aaaaggtgcaccttgctaaaatagaccttcatgaaaatgagtgagtctattgtagcaaacccc 38887327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 45551813 - 45551875
Alignment:
Q  166 tgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45551813 tgaaaaggtgttggttgctaaaatagaccttcatgaaattgagtgggtctattgtagcaaacc 45551875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 1409443 - 1409380
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtag 222  Q
    ||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  1409443 gtccaagagaaaaggtgcaccttgctaaaatagaccttcataaaaatgagtgggtctattgtag 1409380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 27258107 - 27258177
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagacc-ttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||  | ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  27258107 tgtccaagtgaaaaggtgttgattgctaaaatagacccttcatgaaaatgagtggatctattgcagcaaac 27258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 28778109 - 28778167
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||  ||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  28778109 aaaaggtgttggtcgctaaaatagaccttgatgaaaatgagtgggtctattgaagcaaa 28778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 47552509 - 47552569
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    ||||||||||   |||||||||||| ||||||||||| | |||||||||||||||||||||    
T  47552509 aaaaggtgcatcatgctaaaatagatcttcatgaaaaagggtgggtctattgtagcaaacc 47552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 27875988 - 27875931
Alignment:
Q  171 aggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||||||  |||||||||||||||||||||||||   | || ||||||||||||||||    
T  27875988 aggtgcaccttgctaaaatagaccttcatgaaaaaaggcggatctattgtagcaaacc 27875931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 19237603 - 19237674
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19237603 tgtccaagtgaaaaggtgttggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 19237674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 17280689 - 17280767
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  17280689 tgggcatttgtgtccaagtgaaaaggtgttggttgctaaaatagaccttaatgaaaatgagtgggtcaattgtagcaaa 17280767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 17279962 - 17279880
Alignment:
Q  148 tgggcatttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  17279962 tgggtatttgtgtccaagtaaaaaggtgctggttgctaaaatagaccttcataaaaatgaataggtctattgtagcaaacccc 17279880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 29375038 - 29375113
Alignment:
Q  153 atttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||| |||||||||||||||||||   |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29375038 atttttgtccaagtgaaaaggtgctccttgctaaaatggaccttcatgaaaatgagtggatctattgtagcaaacc 29375113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 8683876 - 8683924
Alignment:
Q  178 ggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8683876 ggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 8683924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 10793575 - 10793651
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||||||  | ||||||||||||||||| || |||  |||||||||||||||||||||||||    
T  10793575 tttgtgtccaagtgaaaaggtgttgcttgctaaaatagaccttgataaaatggagtgggtctattgtagcaaacccc 10793651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 5860618 - 5860546
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||| |||||| |||   |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  5860618 tgtccaaatgaaaatgtgtttgttgctaaaatacaccttcataaaaatgagtgggtctattgtagcaaacccc 5860546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 10792555 - 10792479
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||| |||  || ||||||||||||||||||||||    
T  10792555 tttgtgtccaaatgaaaaggtgttgcttgctaaaatagaccttcataaaatggaatgggtctattgtagcaaacccc 10792479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 8238141 - 8238065
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||| |||||| ||||||||||  ||||| || ||||||| ||||| |||||||||| |||||||||||||||||||    
T  8238141 tttgggtccaattgaaaaggtgttggttgatagaatagactttcataaaaatgagtgagtctattgtagcaaacccc 8238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 7001770 - 7001842
Alignment:
Q  155 ttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaac 227  Q
    |||||||||||||||||||||  |  ||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  7001770 ttgtgtccaagtgaaaaggtgttgcatgctaaaatagaccttcat-aaaatgaagtgggtctattgcagcaaac 7001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 28522689 - 28522618
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||| ||||||||||   |||||||||||| |||||  |||  ||||||||||||||||||||||||    
T  28522689 tgtccaagtcaaaaggtgcatcctgctaaaatagagcttcacaaaatagagtgggtctattgtagcaaaccc 28522618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 12441716 - 12441774
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||  |||||||||| ||||||||||||||   |||||||||||||||||||    
T  12441716 aaaaggtgcatcttgctaaaatggaccttcatgaaaagaggtgggtctattgtagcaaa 12441774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 25359566 - 25359496
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaaccc 229  Q
    |||||| | ||||||||  |||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  25359566 gtccaaataaaaaggtgttggttgctaaaatagactttcat-aaaatgaagtgagtctattgtagcaaaccc 25359496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 28523366 - 28523428
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  |||||||||||||||||||  |||  || ||||||||||| ||||||||||    
T  28523366 aaaaggtgcatcttgctaaaatagaccttcacaaaatagaatgggtctattgcagcaaacccc 28523428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 5860490 - 5860535
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggt 213  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||    
T  5860490 aaaaggtgcacgatgctaaaatagactttcatgaaaatgactgggt 5860535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 33471237 - 33471161
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33471237 tttgtgtccaaatgaaaaggtgttggttgctaaaatagaccttcatgaaaatgaatgggtctattgtagcaaacccc 33471161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 22671667 - 22671603
Alignment:
Q  165 gtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22671667 gtgaaaaggtgttggttgttaaaatagaccttcatgaaaatgagtgggtc-attgtagcaaacccc 22671603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 33471854 - 33471921
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaa 226  Q
    |||||| |||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  33471854 gtccaaatgaaaaggtgctagttgctaaaatagaccttcat-aaaatgaagtgggtctattgtagcaaa 33471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 30667922 - 30667861
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    ||||||||||  ||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  30667922 aaaaggtgcaccttgctaaaatataccttcatgaaaaaaggtgggtctattgtagcaaaccc 30667861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 45396 - 45330
Alignment:
Q  163 aagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 229  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45396 aagtgaaaaggtgcatcttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaaccc 45330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 16591522 - 16591595
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaac 227  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| | | |||||||||||||||||||    
T  16591522 tttgtgtccaagtgaaaaggtgttggttgctaaaatagaccttcatgaaattaaatgggtctattgtagcaaac 16591595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 18767565 - 18767639
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||||||| |||||||||||||  ||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  18767565 tttgtgtctaagtgaaaaggtgttggttgctaaaatagacctttataaaaatgagtgagtctattgtagcaaacc 18767639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 39240864 - 39240926
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39240864 aaaaggtgcatcttgctaaaatagaccttcatgaaaatgggtgggtctattgtagcaaacccc 39240926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 9244312 - 9244251
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattg 219  Q
    ||||||| ||||||||||  || ||||||||||||||||||| |||||||||||||||||||    
T  9244312 tgtccaactgaaaaggtgttggatgctaaaatagaccttcataaaaatgagtgggtctattg 9244251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 45631139 - 45631211
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatg-agtgggtctattgtagcaaacccc 230  Q
    |||||||||| ||||||| || |||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  45631139 tgtccaagtgtaaaggtgtagcttgctaaaatagaccttcat-aaaatgaagtgggtctattgtaacaaacccc 45631211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 5483914 - 5483982
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||| ||||||||||  || |||||||||||||||| |||||||||||| |||||||| |||||||    
T  5483914 tgtccaattgaaaaggtgttggatgctaaaatagacctttatgaaaatgagttggtctattatagcaaa 5483982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 9244061 - 9243990
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatga-gtgggtctattgtagcaaacccc 230  Q
    |||||| |||||||||||  | ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  9244061 gtccaaatgaaaaggtgctcggtgctaaaatagaccttcat-aaaatgaagtgggtctattgtagcaaacccc 9243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 29558223 - 29558160
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctatt 218  Q
    ||||||||||||| ||||||||  |||||||||| ||||||||||| ||||||||||||||||||    
T  29558223 tttgtgtccaagtaaaaaggtgttggttgctaaa-tagaccttcataaaaatgagtgggtctatt 29558160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 32667406 - 32667456
Alignment:
Q  180 ttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  32667406 ttgctaaaatagaccttcaagaaaaagggtgggtctattgtagcaaacccc 32667456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 18236729 - 18236653
Alignment:
Q  154 tttgtgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||||||||  |||||||||||  |||||||||||||||||||  |||  ||| ||||||||| |||||||||||    
T  18236729 tttgtgtccaaaggaaaaggtgcatcttgctaaaatagaccttcacaaaatagagcgggtctattatagcaaacccc 18236653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 18237623 - 18237693
Alignment:
Q  158 tgtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacc 228  Q
    |||||||  |||||||||||  |||||||||||||||||||  |||  |||||||||||||||| ||||||    
T  18237623 tgtccaaaggaaaaggtgcatcttgctaaaatagaccttcacaaaatagagtgggtctattgtaacaaacc 18237693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 3220 - 3168
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgt 220  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  3220 aaaaggtgcatcttgctaaaatagaccttcatgaaaatgagcgggtctattgt 3168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 24770 - 24728
Alignment:
Q  184 taaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  24770 taaaatagaacttcatgaaaatgagtgggtctattgtagcaaa 24728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 35061 - 35003
Alignment:
Q  168 aaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaa 226  Q
    ||||||||||   ||||||||||||||||||||||||   |||||||||||||||||||    
T  35061 aaaaggtgcatcatgctaaaatagaccttcatgaaaaaaggtgggtctattgtagcaaa 35003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 35816 - 35865
Alignment:
Q  181 tgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    ||||||||||||||||||||||||   | |||||||||||||||||||||    
T  35816 tgctaaaatagaccttcatgaaaaaaggcgggtctattgtagcaaacccc 35865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 162530 - 162459
Alignment:
Q  159 gtccaagtgaaaaggtgcaggttgctaaaatagaccttcatgaaaatgagtgggtctattgtagcaaacccc 230  Q
    |||||| |||||||||||| | || |||||| ||||||||  ||||   |||||||||||||||||||||||    
T  162530 gtccaaatgaaaaggtgcatgatgttaaaatggaccttcacaaaaagaggtgggtctattgtagcaaacccc 162459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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