View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2292_high_1 (Length: 526)
Name: NF2292_high_1
Description: NF2292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2292_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 40553690 - 40554125
Alignment:
| Q |
1 |
tgaaaactctcattcaagagttgagtgtccatgttatgcattttcttatggcctatctcctgcatcttcaagtattcgaatttgcaaacttgacaaagat |
100 |
Q |
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| T |
40553690 |
tgaaaactctcattcaagagttgagtgtccatgttatgcattttcttatggcctatctcctgcatcttcaagtattcgaatttgcaaacttgacaaagat |
40553789 |
T |
|
| Q |
101 |
tttatgtataatctttcaaagcacattaaagcaaaatatgtggaaccaatatatgtttttaaagggtcgatgaacaatattccgttgaagcttggatatc |
200 |
Q |
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| T |
40553790 |
tttatgtataatctttcaaagcacattaaagcaaaatatgtggaaccaatatatgtttttaaagggtcgatgaacaatattccgctgaagctcggatatc |
40553889 |
T |
|
| Q |
201 |
tttctgttgaattgtgtaaattggtgagcatttttgttgatgatgacaacacatgctctcgaattgaaggtgatatcaatggtacactgtgtgaaatttt |
300 |
Q |
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| T |
40553890 |
tttctgttgaattgtgtaaattggtgagcatttttgttgatgatgacaacacatgctctcgaattgaaggtgatatcaatggtacactgtgtgaaatttt |
40553989 |
T |
|
| Q |
301 |
gaaaacgcttagtcgcaaaaaacaagtttctgcttttgaatttgttcatagtggtattataggttcattagttaagtattcagttcatggccagtgtgtg |
400 |
Q |
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| T |
40553990 |
gaaaacgcttagttgcaaaaaacaagtttctgcttttgaatttgttcatagtggtattataggttcattagttaagtattcagttcatggccagtgtgtg |
40554089 |
T |
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| Q |
401 |
aaggaaaatggaagagtagttataggtgttgatgat |
436 |
Q |
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||||||||||||||| ||||||||||||||| |||| |
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| T |
40554090 |
aaggaaaatggaagattagttataggtgttggtgat |
40554125 |
T |
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