View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2292_high_20 (Length: 211)
Name: NF2292_high_20
Description: NF2292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2292_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 30447546 - 30447400
Alignment:
| Q |
30 |
ctcaactccatattcatccttcttcaactnnnnnnnn--tatgatcaacgcactatcacttctctcctaccactgtcctaaaatatacgctcatccctcc |
127 |
Q |
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| T |
30447546 |
ctcaactccatattcatccttcttcaactaaaaaaaaaatatgatcaacgcactatcacttctctcctaccactgtcttaaaatataagctcatccctcc |
30447447 |
T |
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| Q |
128 |
ccattgtacctcaaaacaccatctacaatcccctccatcttcagcct |
174 |
Q |
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| T |
30447446 |
ccattgtacctcaaaacaccatctacaatctcctccatcttcagcct |
30447400 |
T |
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