View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2293_high_10 (Length: 301)

Name: NF2293_high_10
Description: NF2293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2293_high_10
NF2293_high_10
[»] chr5 (9 HSPs)
chr5 (19-300)||(34233278-34233559)
chr5 (19-300)||(34241051-34241332)
chr5 (20-291)||(42122805-42123076)
chr5 (19-295)||(42117053-42117332)
chr5 (20-300)||(42128200-42128479)
chr5 (19-290)||(41618153-41618424)
chr5 (19-290)||(41572514-41572785)
chr5 (178-300)||(41714043-41714165)
chr5 (20-138)||(41714170-41714288)
[»] chr3 (1 HSPs)
chr3 (20-300)||(8522428-8522708)
[»] chr4 (1 HSPs)
chr4 (20-291)||(11117462-11117739)
[»] chr6 (1 HSPs)
chr6 (19-295)||(25523524-25523803)
[»] chr2 (5 HSPs)
chr2 (19-295)||(11994890-11995170)
chr2 (19-295)||(12247760-12248039)
chr2 (25-238)||(9423281-9423495)
chr2 (19-98)||(32682381-32682460)
chr2 (122-157)||(32682349-32682384)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 34233559 - 34233278
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34233559 cacaaaccatctaggctttccaattaaaaacatataatatccaaggcctattccaaacacaaatccacatccataaccaattgccactggtttccatcca 34233460  T
Q  119 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34233459 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 34233360  T
Q  219 tccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaatgatc 300  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||    
T  34233359 tccctttataagaatcatttgtaaatgtattgaattgctttccttgaggtatttctcccacaagatggttattggaaagatc 34233278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 34241332 - 34241051
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34241332 cacaaaccatctaggctttccaattaaaaacatataatatccaaggcctattccaaacacaaatccacatccataaccaattgccactggtttccatcca 34241233  T
Q  119 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34241232 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 34241133  T
Q  219 tccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaatgatc 300  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||    
T  34241132 tccctttataagaatcatttgtaaatgtattgaattgctttccttgaggtatttctcccacaagatggttattggaaagatc 34241051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 20 - 291
Target Start/End: Original strand, 42122805 - 42123076
Alignment:
Q  20 acaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaa 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||| ||    
T  42122805 acaagccatctaggctttccaattaaaaacatataatatccaatgcatattccaatcacaaatccacatccatatccaatcgccactggtttccatccaa 42122904  T
Q  120 agccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagtt 219  Q
    | | ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  | ||    
T  42122905 atctaaatttctcttcactccaagagttcttggctgaaggtggagaatgttgttcaggtccacatttttttgacaagggtaatccacataaccctgaatt 42123004  T
Q  220 ccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttatt 291  Q
     |||| ||| ||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||    
T  42123005 tccttcataggaatcatttgtaaatgtattgaactgctttccttgaggtatttctcccacaagatggttatt 42123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 295
Target Start/End: Original strand, 42117053 - 42117332
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |    
T  42117053 cacaatccatctaggctttccaattaaaaacataaaatatccaatgcctattccaatcacaaatccacatccatatccaattgccactgctttccatcca 42117152  T
Q  119 aagccaaatttctcttcactccaaaa---gttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataacccca 215  Q
    || ||||||||||||||||| |||||   |||||||||||||  ||||||||| ||||| ||||||||  |||||||||| || ||||||||||| ||||    
T  42117153 aatccaaatttctcttcactgcaaaagctgttgttggctgaaattggagaatgatgttcaggtccacaaatctttgacaacggaaatccacataaaccca 42117252  T
Q  216 agttccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaa 295  Q
    |||| ||||| || |||||||||| |||||||| ||| |||     ||||||||||| ||| || |||||||||||||||    
T  42117253 agtttcctttgtaggaatcatttggaaatgtatcgaagtgcggctcttgaggtatttttcccactagatggttattggaa 42117332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 42128200 - 42128479
Alignment:
Q  20 acaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaa 119  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||    
T  42128200 acaagccatctagacttttcaattaaaaacatataatatccaatgcctattccaatcacaaatccacatccatatccaatcgccactggtttccatccaa 42128299  T
Q  120 agccaaatttctcttcactccaaaagttgttggctga-aggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 218  Q
    | | ||||||||||||||||||| |||||||| |  | |  ||  |||  |||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  42128300 atctaaatttctcttcactccaagagttgttgtcaaagaattgtggaa--ttgttcaggtccacaattctttgacaagggaaatccacataaccccaagt 42128397  T
Q  219 tccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaatgatc 300  Q
    | |||| ||| |||||||||||||||||||||||||||   | ||||||||||||||| || ||||||||||| ||| ||||    
T  42128398 ttccttcataggaatcatttgtaaatgtattgaattgcggtccttgaggtatttctcccactagatggttatttgaaagatc 42128479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 290
Target Start/End: Complemental strand, 41618424 - 41618153
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| ||||||||||||||||||||| |||| | || |||||| |||||||||||  || | |||||||||||| ||||| |||||||||||||||| |    
T  41618424 cacaagccatctaggctttccaattaacaacacaaaacatccaaggcctattccaataaccattccacatccatatccaatagccactggtttccatcca 41618325  T
Q  119 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 218  Q
    || |||||||||||||||||||||| |||||||| || | | |||||||||||||| ||| ||||||||||||||||||| ||||| ||||| |||||||    
T  41618324 aatccaaatttctcttcactccaaaggttgttgggtggaagcggagaatgttgttcaggttcacatttctttgacaagggaaatccgcataatcccaagt 41618225  T
Q  219 tccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttat 290  Q
    | |||| ||| || ||||| | |||||||||||| || || | ||||||||||||||| || ||||||||||    
T  41618224 ttccttcatatgagtcattggaaaatgtattgaactgttttccttgaggtatttctcccactagatggttat 41618153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 290
Target Start/End: Complemental strand, 41572785 - 41572514
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| |||||||||||||||  |||| |||| | || |||||| |||||||||||  || | |||||||||||| ||||| |||||||||||||||| |    
T  41572785 cacaagccatctaggctttccggttaacaacacaaaacatccaaggcctattccaataaccattccacatccatatccaatagccactggtttccatcca 41572686  T
Q  119 aagccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagt 218  Q
    || |||||||||||||||||||||| |||||||| || | | |||||||||||||| ||| ||||||||||||||||||| ||||| ||||| |||||||    
T  41572685 aatccaaatttctcttcactccaaaggttgttgggtggaagcggagaatgttgttcaggttcacatttctttgacaagggaaatccgcataatcccaagt 41572586  T
Q  219 tccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttat 290  Q
    | |||| ||| || ||||| | |||||||||||| || || | ||||||||||||||| || ||||||||||    
T  41572585 ttccttcatatgagtcattggaaaatgtattgaactgttttccttgaggtatttctcccactagatggttat 41572514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 41714165 - 41714043
Alignment:
Q  178 tccacatttctttgacaagggtaatccacataaccccaagttccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctcca 277  Q
    |||||| ||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||| | |||||||||||||||     
T  41714165 tccacaattcttggacaagggaaatccacataaccccaagtttccttcataggaatcatttgtaaatgtattgaactgctttccttgaggtatttctccc 41714066  T
Q  278 acaagatggttattggaatgatc 300  Q
    |||||||||||||| ||| ||||    
T  41714065 acaagatggttattagaaagatc 41714043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 41714288 - 41714170
Alignment:
Q  20 acaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaa 119  Q
    |||| ||||||||||||||| || |||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||    
T  41714288 acaagccatctaggctttccgatcaaaaacatgtaatacccaatgcctattccaatcacaaatccacatccatatccaattgccactgctttccatccaa 41714189  T
Q  120 agccaaatttctcttcact 138  Q
    | |||||||||||| ||||    
T  41714188 atccaaatttctctgcact 41714170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 8522428 - 8522708
Alignment:
Q  20 acaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaa 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| ||    
T  8522428 acaagccatctaggctttccaattaaaaacatataatatccaatgcctattccaatcacaaatccacatccgtatccaattgccactggtttccatccaa 8522527  T
Q  120 agccaaatttctcttcactccaaaagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagtt 219  Q
    |  |||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||  | |||||||||||||||||||||||  |||||||    
T  8522528 attcaaacttctcttcactgcaaaagttgttggctgaaggtgcagaatgttgttcaggtccacacatttttgacaagggtaatccacataaatccaagtt 8522627  T
Q  220 ccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaatgatc 300  Q
     |||| ||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||| | ||||||||| ||||    
T  8522628 tccttcataagaatcatttgtaaatgtattgaattgctttccctgaggtatttctcccacaagacgattattggaaagatc 8522708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 20 - 291
Target Start/End: Original strand, 11117462 - 11117739
Alignment:
Q  20 acaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaa 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||||| |||||||| ||    
T  11117462 acaagccatctaggctttccaattaaaaacatataatatccaatgcttattccaatcacaaatccacatgcatatccaattgccactgctttccatccaa 11117561  T
Q  120 agccaaatttctcttcactccaaaag------ttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccc 213  Q
    | ||||||||||||||| ||||| ||      ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11117562 atccaaatttctcttcattccaagaggaagagttgttggctgaaggtggagaatgttgttcaggtccacatttctttgacaagggtaatccacataaccc 11117661  T
Q  214 caagttccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttatt 291  Q
      | || |||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||| || |||||||||||    
T  11117662 tgaatttccttcataggaatcatttgtaaatgtattgaattgctttccttgaggtatttctcccactagatggttatt 11117739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 19 - 295
Target Start/End: Complemental strand, 25523803 - 25523524
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||| |||| ||| |||||| |    
T  25523803 cacaagccatctaggctttccaactaaaaacatacaatatccaatgcctattccaatcagaaatccacatccatatccaattaccaccggtatccatcca 25523704  T
Q  119 aagccaaatttctcttcactccaaaagtt---gttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataacccca 215  Q
    || ||||||||||||||||||||||||||   ||||| |||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||    
T  25523703 aatccaaatttctcttcactccaaaagtttttgttgggtgaaggtggagaatgttgttcaagtccacatctctttgacaagggaaatccacataacccca 25523604  T
Q  216 agttccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaa 295  Q
    |||| |||| ||| ||||||||||||||||| ||||||||||| | |  |||||||||||| || | |||||||||||||    
T  25523603 agtttccttcataggaatcatttgtaaatgtgttgaattgctttcctctaggtatttctcccaccaaatggttattggaa 25523524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 295
Target Start/End: Complemental strand, 11995170 - 11994890
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| |||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |    
T  11995170 cacaagccatctaggctttccaattaaaaacatacaatatccgaggcctattccaatcacaaatccacatccatatccaattgccactggtttccatcca 11995071  T
Q  119 aagccaaatttctcttcactccaaaa---gttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataacccca 215  Q
    || |||||||||||||||||| ||||   |||||||| ||||||||||||| ||||||| ||||| || |||||||||||||| ||| |||||||| |||    
T  11995070 aatccaaatttctcttcactcgaaaagctgttgttgggtgaaggtggagaacgttgttcaggtccgcacttctttgacaagggaaattcacataactcca 11994971  T
Q  216 agttccctttataagaatcatttgtaaatgtat-tgaattgcttgcattgaggtatttctccaacaagatggttattggaa 295  Q
    |||| |||  ||| |||||||||| |||||| |  ||| || || | | ||||||||||||| || |||||||||||||||    
T  11994970 agtttcctacatatgaatcatttgaaaatgtctcggaactgttttcctcgaggtatttctcccactagatggttattggaa 11994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 19 - 295
Target Start/End: Original strand, 12247760 - 12248039
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatcta 118  Q
    ||||| |||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |||||||||| |    
T  12247760 cacaagccatctaggctttccaattaaaaacatacaatatccgaggcctattccaatcacaaatccacatccatatccaattgccaccggtttccatcca 12247859  T
Q  119 aagccaaatttctcttcactccaaaagttgttggc---tgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataacccca 215  Q
    || ||||||||| | || ||||||||| |||||     ||||||| |||||| |||||| |||||||| |||||||||||||| |||||||||||| |||    
T  12247860 aatccaaatttcgcgtcgctccaaaagctgttgttaagtgaaggttgagaatattgttcaggtccacacttctttgacaagggaaatccacataactcca 12247959  T
Q  216 agttccctttataagaatcatttgtaaatgtattgaattgcttgcattgaggtatttctccaacaagatggttattggaa 295  Q
    |||| |||  ||| |||||||||| |||||| | ||| || || | | ||||||||||||| || |||||||||||||||    
T  12247960 agtttcctacatatgaatcatttgaaaatgtctcgaactgttttcctcgaggtatttctcccactagatggttattggaa 12248039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 9423495 - 9423281
Alignment:
Q  25 ccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaattgccactggtttccatctaaagcca 124  Q
    ||||||||||||||||||||| | |||| || |||||| |||| |||||| ||| | |||||||||||| ||||||||||||| |||||||| ||| |||    
T  9423495 ccatctaggctttccaattaacagcatacaacatccaaggccttttccaagcaccattccacatccatatccaattgccactgatttccatccaaatcca 9423396  T
Q  125 aatttctcttcactccaa---aagttgttggctgaaggtggagaatgttgttccggtccacatttctttgacaagggtaatccacataaccccaagttcc 221  Q
    |||||||||||| | |||   || ||||||| ||||| || ||||| | |||  |||||||||||| || ||||||| ||||  ||||||||| |||| |    
T  9423395 aatttctcttcattgcaatataatttgttgggtgaagttgtagaatttcgtttaggtccacatttcatttacaagggaaatc--cataacccccagtttc 9423298  T
Q  222 ctttataagaatcattt 238  Q
    ||| |||| ||||||||    
T  9423297 cttcataaaaatcattt 9423281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 32682460 - 32682381
Alignment:
Q  19 cacaaaccatctaggctttccaattaaaaacatataatatccaatgcctattccaaacacaaatccacatccataaccaa 98  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||    
T  32682460 cacaagccatctaggctttccaattaaaaacataaagtatccaatgcctattccaatcacaaatccacatccatatccaa 32682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 157
Target Start/End: Complemental strand, 32682384 - 32682349
Alignment:
Q  122 ccaaatttctcttcactccaaaagttgttggctgaa 157  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32682384 ccaaatttctcttcactccgaaagttgttggctgaa 32682349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University