View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2293_low_15 (Length: 248)
Name: NF2293_low_15
Description: NF2293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2293_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 40839301 - 40839519
Alignment:
| Q |
20 |
ggttcaaccttgttatgttatatttatcagaaggcaaaactaatctagcatagatagtataaaaatttgacccttgatcatgttgaatcgacatatctga |
119 |
Q |
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| T |
40839301 |
ggttcaaccttgttatgttatatttatcagaaggcaaaactaatctagcatagatagtataaaaatttgacccttgatcatgttgaatcgacatatctga |
40839400 |
T |
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| Q |
120 |
cacattaaggccaatatcggtaggtaaaagactgcaacctcttttggttcctttagtaacatcataggtaccaactggcaaatatgtaccatggtatctg |
219 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40839401 |
cacattaaggccaatatcggtaggtaaaagactacaacctcttttggttcctttagtaacatcataggtaccaactggcaaatatgtaccatggtatctg |
40839500 |
T |
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| Q |
220 |
atccctatgattgcctttg |
238 |
Q |
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||||||||||||||||||| |
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| T |
40839501 |
atccctatgattgcctttg |
40839519 |
T |
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