View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2293_low_4 (Length: 490)

Name: NF2293_low_4
Description: NF2293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2293_low_4
NF2293_low_4
[»] chr4 (68 HSPs)
chr4 (1-477)||(52733370-52733849)
chr4 (318-466)||(13455703-13455852)
chr4 (335-458)||(11055232-11055356)
chr4 (329-466)||(12673028-12673166)
chr4 (338-471)||(26632933-26633067)
chr4 (338-466)||(51995080-51995209)
chr4 (375-466)||(22184505-22184597)
chr4 (338-466)||(40797832-40797961)
chr4 (335-466)||(24007909-24008041)
chr4 (403-466)||(25134576-25134640)
chr4 (335-466)||(46944550-46944682)
chr4 (347-477)||(48151144-48151275)
chr4 (338-458)||(80507-80628)
chr4 (390-466)||(44378252-44378329)
chr4 (338-466)||(48977578-48977707)
chr4 (370-466)||(49059831-49059928)
chr4 (375-466)||(1803500-1803592)
chr4 (335-466)||(51407955-51408087)
chr4 (383-466)||(52813603-52813687)
chr4 (373-466)||(7505531-7505625)
chr4 (335-466)||(21441583-21441715)
chr4 (335-466)||(36156300-36156432)
chr4 (335-466)||(55891991-55892123)
chr4 (360-466)||(19455189-19455296)
chr4 (375-477)||(27891378-27891480)
chr4 (338-466)||(28265682-28265808)
chr4 (403-469)||(50710844-50710911)
chr4 (403-456)||(5762619-5762673)
chr4 (403-456)||(5769189-5769243)
chr4 (364-426)||(49061684-49061746)
chr4 (338-466)||(12789561-12789690)
chr4 (375-443)||(13761824-13761893)
chr4 (338-466)||(53369874-53370003)
chr4 (335-458)||(49083240-49083364)
chr4 (335-466)||(56224147-56224279)
chr4 (403-457)||(5764647-5764702)
chr4 (403-457)||(5766891-5766946)
chr4 (372-466)||(6866146-6866241)
chr4 (390-464)||(15697144-15697219)
chr4 (426-477)||(16742423-16742474)
chr4 (409-466)||(24550079-24550137)
chr4 (403-468)||(48339173-48339239)
chr4 (425-466)||(19852980-19853021)
chr4 (433-466)||(22721330-22721363)
chr4 (387-455)||(34718152-34718221)
chr4 (425-466)||(36543783-36543824)
chr4 (425-466)||(45674837-45674878)
chr4 (425-466)||(50606010-50606051)
chr4 (425-466)||(53369690-53369731)
chr4 (403-466)||(9469779-9469843)
chr4 (335-466)||(9959345-9959465)
chr4 (375-466)||(28470821-28470913)
chr4 (426-466)||(38493075-38493115)
chr4 (375-466)||(43798269-43798361)
chr4 (335-458)||(49405641-49405765)
chr4 (403-466)||(52706219-52706283)
chr4 (406-456)||(5728758-5728809)
chr4 (399-477)||(25608771-25608850)
chr4 (393-471)||(48731237-48731316)
chr4 (375-460)||(34980550-34980636)
chr4 (373-415)||(43387311-43387353)
chr4 (393-458)||(48802540-48802606)
chr4 (428-466)||(49820984-49821022)
chr4 (410-466)||(9222211-9222268)
chr4 (376-432)||(38791728-38791785)
chr4 (335-466)||(9906362-9906494)
chr4 (380-424)||(36644035-36644079)
chr4 (368-424)||(41822145-41822201)
[»] chr3 (35 HSPs)
chr3 (338-466)||(9505130-9505259)
chr3 (338-466)||(28242585-28242714)
chr3 (338-458)||(52934822-52934943)
chr3 (338-466)||(12710704-12710833)
chr3 (335-466)||(30662137-30662269)
chr3 (375-463)||(18074581-18074670)
chr3 (393-469)||(46293277-46293354)
chr3 (375-466)||(52199431-52199523)
chr3 (396-466)||(28700999-28701070)
chr3 (338-466)||(39942809-39942938)
chr3 (403-466)||(40943563-40943627)
chr3 (378-468)||(25253702-25253793)
chr3 (403-469)||(39135353-39135420)
chr3 (338-466)||(26049549-26049678)
chr3 (335-466)||(32689171-32689303)
chr3 (335-446)||(33438737-33438849)
chr3 (392-466)||(5418680-5418755)
chr3 (381-466)||(50965405-50965492)
chr3 (381-466)||(51068540-51068627)
chr3 (339-484)||(39469541-39469687)
chr3 (338-466)||(20550211-20550340)
chr3 (338-458)||(54393452-54393573)
chr3 (403-466)||(54432265-54432329)
chr3 (403-459)||(55452744-55452800)
chr3 (339-477)||(1674620-1674759)
chr3 (412-466)||(52199391-52199446)
chr3 (365-466)||(41609890-41609992)
chr3 (360-471)||(15822380-15822492)
chr3 (406-456)||(18652528-18652579)
chr3 (425-468)||(28687072-28687115)
chr3 (360-466)||(31589624-31589731)
chr3 (387-447)||(30743593-30743654)
chr3 (148-181)||(42145688-42145721)
chr3 (378-449)||(1072758-1072830)
chr3 (390-449)||(25582625-25582685)
[»] chr1 (56 HSPs)
chr1 (335-464)||(45581014-45581144)
chr1 (338-466)||(28006352-28006481)
chr1 (338-461)||(44596524-44596648)
chr1 (335-466)||(24575911-24576043)
chr1 (375-472)||(5204515-5204613)
chr1 (338-458)||(15306503-15306624)
chr1 (365-477)||(23915633-23915746)
chr1 (336-477)||(14101853-14101996)
chr1 (335-466)||(27076521-27076653)
chr1 (335-466)||(50447343-50447475)
chr1 (373-455)||(30251437-30251520)
chr1 (360-458)||(31869604-31869703)
chr1 (335-471)||(7995968-7996105)
chr1 (338-466)||(40159639-40159768)
chr1 (335-466)||(47602868-47603000)
chr1 (335-437)||(12224581-12224684)
chr1 (369-463)||(20347671-20347766)
chr1 (383-477)||(51432257-51432352)
chr1 (373-466)||(14796590-14796684)
chr1 (373-466)||(14805464-14805558)
chr1 (335-468)||(47983255-47983389)
chr1 (338-466)||(7596395-7596524)
chr1 (403-463)||(15257245-15257306)
chr1 (338-466)||(24469826-24469955)
chr1 (338-466)||(32179860-32179989)
chr1 (338-458)||(35810728-35810849)
chr1 (338-466)||(38061187-38061316)
chr1 (335-458)||(31816578-31816702)
chr1 (403-458)||(39802841-39802897)
chr1 (338-468)||(7702835-7702966)
chr1 (369-463)||(20349151-20349246)
chr1 (338-448)||(21680665-21680776)
chr1 (365-466)||(42916150-42916252)
chr1 (338-466)||(25124894-25125023)
chr1 (338-466)||(29677528-29677657)
chr1 (338-466)||(36419103-36419232)
chr1 (338-444)||(15014339-15014446)
chr1 (376-466)||(48575127-48575218)
chr1 (375-466)||(3577672-3577765)
chr1 (365-466)||(46264980-46265082)
chr1 (406-466)||(8828303-8828364)
chr1 (402-466)||(33233623-33233688)
chr1 (384-444)||(34411959-34412020)
chr1 (425-466)||(37441283-37441324)
chr1 (143-182)||(2141590-2141629)
chr1 (381-458)||(28020602-28020680)
chr1 (390-462)||(19508534-19508607)
chr1 (338-466)||(42937076-42937205)
chr1 (338-418)||(7841674-7841753)
chr1 (403-466)||(7956326-7956390)
chr1 (433-469)||(13157161-13157197)
chr1 (88-192)||(13953203-13953305)
chr1 (137-177)||(13953345-13953385)
chr1 (335-446)||(14578591-14578703)
chr1 (403-466)||(40002896-40002960)
chr1 (403-466)||(43087540-43087604)
[»] chr5 (41 HSPs)
chr5 (335-477)||(19282120-19282263)
chr5 (338-466)||(27450590-27450719)
chr5 (339-458)||(40056373-40056493)
chr5 (376-466)||(1840734-1840825)
chr5 (335-466)||(27196079-27196211)
chr5 (338-466)||(34719666-34719795)
chr5 (335-466)||(31620870-31621002)
chr5 (338-465)||(34724763-34724891)
chr5 (375-466)||(39407408-39407500)
chr5 (339-469)||(24536006-24536137)
chr5 (375-469)||(26298310-26298405)
chr5 (335-468)||(31021863-31021997)
chr5 (339-466)||(39414183-39414312)
chr5 (403-466)||(3801438-3801502)
chr5 (339-466)||(26299849-26299977)
chr5 (381-466)||(34723705-34723791)
chr5 (375-466)||(19716185-19716277)
chr5 (376-469)||(34857346-34857440)
chr5 (335-420)||(5382831-5382916)
chr5 (338-466)||(27906100-27906229)
chr5 (338-466)||(38522870-38522999)
chr5 (402-466)||(39409142-39409207)
chr5 (390-466)||(41783327-41783404)
chr5 (370-457)||(1225362-1225450)
chr5 (152-196)||(16388095-16388139)
chr5 (335-466)||(18880194-18880326)
chr5 (335-466)||(20188975-20189107)
chr5 (335-458)||(32945027-32945151)
chr5 (335-458)||(29328054-29328177)
chr5 (409-466)||(10493987-10494045)
chr5 (378-466)||(14500755-14500844)
chr5 (402-466)||(28246734-28246799)
chr5 (403-446)||(2676038-2676082)
chr5 (426-466)||(43386729-43386769)
chr5 (143-194)||(34981067-34981118)
chr5 (386-455)||(5028905-5028975)
chr5 (433-466)||(3457828-3457861)
chr5 (425-466)||(11136103-11136144)
chr5 (390-466)||(26218049-26218126)
chr5 (425-466)||(32157034-32157075)
chr5 (375-466)||(1091126-1091217)
[»] chr2 (33 HSPs)
chr2 (338-463)||(3409197-3409323)
chr2 (335-477)||(24844672-24844815)
chr2 (358-477)||(9963750-9963870)
chr2 (383-468)||(2578079-2578165)
chr2 (335-471)||(27464578-27464715)
chr2 (375-466)||(44740529-44740621)
chr2 (338-466)||(27634673-27634802)
chr2 (379-466)||(11007022-11007110)
chr2 (365-456)||(41332243-41332335)
chr2 (381-477)||(44935758-44935854)
chr2 (375-472)||(13829874-13829972)
chr2 (338-466)||(33831497-33831626)
chr2 (383-466)||(1094459-1094543)
chr2 (335-466)||(40458923-40459055)
chr2 (378-464)||(17369039-17369125)
chr2 (375-477)||(17616258-17616361)
chr2 (335-464)||(41959147-41959277)
chr2 (338-466)||(26436356-26436484)
chr2 (391-466)||(34064707-34064783)
chr2 (335-458)||(36538666-36538790)
chr2 (375-441)||(28968847-28968914)
chr2 (376-469)||(12070561-12070655)
chr2 (365-466)||(30713158-30713260)
chr2 (338-424)||(40680255-40680340)
chr2 (390-466)||(2647035-2647112)
chr2 (381-469)||(14103266-14103355)
chr2 (370-466)||(38409612-38409709)
chr2 (403-466)||(34116247-34116311)
chr2 (425-458)||(33164077-33164110)
chr2 (425-466)||(39690172-39690213)
chr2 (426-463)||(40680226-40680263)
chr2 (335-459)||(45383144-45383269)
chr2 (374-477)||(6140084-6140188)
[»] chr7 (57 HSPs)
chr7 (338-463)||(33124705-33124831)
chr7 (335-471)||(33898950-33899087)
chr7 (338-466)||(46573621-46573750)
chr7 (375-466)||(10618928-10619020)
chr7 (375-466)||(33935515-33935607)
chr7 (338-466)||(22075070-22075199)
chr7 (384-460)||(48634460-48634537)
chr7 (335-466)||(17025367-17025499)
chr7 (335-469)||(32356965-32357100)
chr7 (373-466)||(222270-222364)
chr7 (338-466)||(18250002-18250131)
chr7 (338-466)||(18740227-18740356)
chr7 (339-466)||(21760593-21760721)
chr7 (403-466)||(26719822-26719886)
chr7 (335-466)||(37334285-37334417)
chr7 (347-477)||(23227017-23227148)
chr7 (347-477)||(23236170-23236301)
chr7 (337-466)||(45176252-45176382)
chr7 (375-466)||(44421947-44422040)
chr7 (403-466)||(7447883-7447947)
chr7 (327-466)||(31491822-31491962)
chr7 (338-477)||(33171543-33171683)
chr7 (335-466)||(36472446-36472578)
chr7 (360-466)||(49034255-49034362)
chr7 (338-466)||(5776139-5776268)
chr7 (338-466)||(36927006-36927135)
chr7 (338-463)||(665856-665982)
chr7 (373-418)||(24128544-24128589)
chr7 (338-466)||(43052879-43053008)
chr7 (335-446)||(27231545-27231657)
chr7 (391-466)||(42072090-42072166)
chr7 (403-466)||(48505862-48505926)
chr7 (403-469)||(29037854-29037921)
chr7 (425-466)||(3930813-3930854)
chr7 (425-466)||(5795033-5795074)
chr7 (425-466)||(15434250-15434291)
chr7 (338-466)||(28949767-28949896)
chr7 (376-466)||(35543603-35543691)
chr7 (390-466)||(45055735-45055812)
chr7 (425-469)||(2466614-2466658)
chr7 (383-458)||(29527401-29527481)
chr7 (403-466)||(37239840-37239904)
chr7 (403-469)||(10096475-10096542)
chr7 (282-325)||(22189579-22189622)
chr7 (426-477)||(41449747-41449798)
chr7 (137-195)||(18779248-18779306)
chr7 (8-42)||(21556567-21556601)
chr7 (377-466)||(30919429-30919519)
chr7 (365-446)||(37106853-37106935)
chr7 (381-466)||(48868141-48868227)
chr7 (390-462)||(11595857-11595930)
chr7 (406-466)||(17608719-17608780)
chr7 (14-87)||(18779605-18779677)
chr7 (425-466)||(26216279-26216320)
chr7 (425-466)||(40480148-40480189)
chr7 (335-466)||(20401003-20401135)
chr7 (378-466)||(37101148-37101236)
[»] chr6 (24 HSPs)
chr6 (338-477)||(4441310-4441450)
chr6 (335-458)||(1501858-1501982)
chr6 (338-458)||(17441168-17441289)
chr6 (403-466)||(13312024-13312088)
chr6 (338-466)||(3081727-3081856)
chr6 (370-466)||(10961837-10961934)
chr6 (375-466)||(6999269-6999361)
chr6 (363-458)||(32163551-32163647)
chr6 (338-466)||(5640261-5640390)
chr6 (375-466)||(18095521-18095613)
chr6 (375-466)||(18099818-18099910)
chr6 (427-466)||(8200644-8200683)
chr6 (358-466)||(11460043-11460144)
chr6 (137-182)||(3437798-3437843)
chr6 (390-466)||(7437306-7437383)
chr6 (425-466)||(10346723-10346764)
chr6 (375-443)||(17507315-17507384)
chr6 (378-457)||(2156010-2156090)
chr6 (426-458)||(12428897-12428929)
chr6 (425-464)||(13355722-13355761)
chr6 (409-458)||(2962782-2962832)
chr6 (378-469)||(9463403-9463495)
chr6 (403-466)||(9950834-9950898)
chr6 (435-471)||(34116628-34116664)
[»] chr8 (20 HSPs)
chr8 (338-458)||(3307944-3308065)
chr8 (365-466)||(27189118-27189220)
chr8 (375-466)||(1091729-1091821)
chr8 (335-466)||(33279983-33280115)
chr8 (338-424)||(43384839-43384925)
chr8 (338-466)||(11161574-11161703)
chr8 (369-463)||(35058312-35058407)
chr8 (338-466)||(453485-453614)
chr8 (390-466)||(43967512-43967589)
chr8 (378-463)||(9412573-9412659)
chr8 (1-91)||(10149693-10149782)
chr8 (375-466)||(23181157-23181249)
chr8 (378-477)||(24854590-24854690)
chr8 (425-469)||(28492749-28492793)
chr8 (376-466)||(32740641-32740732)
chr8 (392-466)||(34655037-34655112)
chr8 (360-457)||(22564017-22564115)
chr8 (268-325)||(32958026-32958083)
chr8 (281-325)||(944097-944141)
chr8 (378-457)||(9135963-9136043)
[»] scaffold0025 (1 HSPs)
scaffold0025 (335-468)||(11390-11524)
[»] scaffold0171 (1 HSPs)
scaffold0171 (335-466)||(21090-21221)
[»] scaffold0444 (1 HSPs)
scaffold0444 (390-466)||(828-905)
[»] scaffold0002 (1 HSPs)
scaffold0002 (335-466)||(96282-96414)
[»] scaffold0260 (2 HSPs)
scaffold0260 (369-463)||(9994-10089)
scaffold0260 (369-463)||(11474-11569)
[»] scaffold0224 (1 HSPs)
scaffold0224 (365-466)||(7344-7446)
[»] scaffold0063 (1 HSPs)
scaffold0063 (338-471)||(51311-51445)
[»] scaffold0223 (1 HSPs)
scaffold0223 (335-458)||(14436-14560)
[»] scaffold0204 (1 HSPs)
scaffold0204 (403-468)||(26695-26761)
[»] scaffold0316 (1 HSPs)
scaffold0316 (425-466)||(19298-19339)
[»] scaffold0263 (1 HSPs)
scaffold0263 (393-465)||(17238-17311)
[»] scaffold0027 (1 HSPs)
scaffold0027 (137-180)||(12882-12925)
[»] scaffold0022 (1 HSPs)
scaffold0022 (338-463)||(124490-124616)
[»] scaffold0135 (1 HSPs)
scaffold0135 (410-466)||(32864-32921)


Alignment Details
Target: chr4 (Bit Score: 398; Significance: 0; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 477
Target Start/End: Original strand, 52733370 - 52733849
Alignment:
Q  1 tattataaaagtgttgcaatcacaagttctaccgtgaagtttaggcttagagaaaattgatggaagcatcaattttgccttttggaatttttgacatttg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  52733370 tattataaaagtgttgcaatcataagttctaccgtgaagtttaggcttagagaaaattgatggaagcatcaattttgccttttggaatttttgacatgtg 52733469  T
Q  101 gaaattcttggagggattttagtttcgagggaagtgtactcattatggtgaagtatgatagttcttttcaactatgattgtcaattaagacaatgttaat 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52733470 gaaattcttggaggggttttagtttcgagggaagtgtactcattatggtggagtatgatagttcttttcaactatgattgtcaattaagacaatgttaat 52733569  T
Q  201 tttttgagtgattatattttttatgttggaatatgatag---nnnnnnnnaactacgattgtttgtgaccacaatggaagcgaatgtatcatttttaatc 297  Q
    |||||||||||||||||||||||||||||||||||||||           | || | |||||||||||||||||||||||||||||||||||||||||||    
T  52733570 tttttgagtgattatattttttatgttggaatatgatagtttttttttttatctgcaattgtttgtgaccacaatggaagcgaatgtatcatttttaatc 52733669  T
Q  298 aaggtaaagattgttggtgttggatgaagattagagatgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaa 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  52733670 aaggtaaagattgttggtgttgggtgaagattagagatgacaatgaactgaaccaacttaataataattcgaaatttgattcgataattaactcgttgaa 52733769  T
Q  398 tttaattcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52733770 tttaattcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaataagttgaacttaaattgtatat 52733849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 318 - 466
Target Start/End: Complemental strand, 13455852 - 13455703
Alignment:
Q  318 tggatgaagattagagatgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatg 417  Q
    |||||| | ||||| | ||||||| ||| |||||| ||||| ||||||| || ||| |||||||||||||| |||||||| || ||| ||||||||||||    
T  13455852 tggatgcaaattagggctgacaataaaccgaaccaacttgaaaataatttgagattcgattcgataattaattcgttgaacttgatttatgaaccaaatg 13455753  T
Q  418 agttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||  || ||||||| |||||||||||||||||||||| |||||||||||    
T  13455752 agtccaacttgagctcaaaattaagttcgttaaataaacgagttgaactt 13455703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 11055232 - 11055356
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| |||| || | ||||||||||||||||| ||||| ||  ||||||||||||||||| |||| |||||| ||    
T  11055232 tgacaatgaaccgaaccaactcgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttgagcgga 11055331  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||||||||||||||||||||    
T  11055332 aaattaagttcgttaaataaatgag 11055356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 466
Target Start/End: Original strand, 12673028 - 12673166
Alignment:
Q  329 tagagatgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttg 427  Q
    ||||| || |||||||| |||||| || || |||| ||||| ||| |||||||||||| |||||||||| ||  |||||||||||||||||| ||| |||    
T  12673028 tagagttggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 12673127  T
Q  428 agctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    || ||||||||||| || |||||||||||||| ||||||    
T  12673128 agttgaaaattaagctcattaaataaatgagtcgaactt 12673166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 338 - 471
Target Start/End: Complemental strand, 26633067 - 26632933
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||||||| |||| || | ||||||| ||||||||||||||| ||   |||| ||||||||||| |||| ||||||||||||    
T  26633067 caatgaaccgaaccaactcgataatagttcgtaactcgattcgacaattaactcgttgaacttggctcattaaccaaatgagctgaacttgagctgaaaa 26632968  T
Q  437 ttaagttcgttaaataaatgagttgaacttaaatt 471  Q
    ||||||||||||||||||||||  |||||| ||||    
T  26632967 ttaagttcgttaaataaatgagccgaacttgaatt 26632933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 51995209 - 51995080
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||| | | |||||||||||||| |||||||| ||  |||||||||||||||||  ||| ||||||| ||||    
T  51995209 caatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgagccgaacttgagctcaaaa 51995110  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| |||||||||| |||||||||||    
T  51995109 ttaagtttgttaaataaacgagttgaactt 51995080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 22184597 - 22184505
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| ||||||||||||||| ||  ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  22184597 gattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctgaaaattaagttcgttaaacaaatgagctgaactt 22184505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 40797961 - 40797832
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| ||  | |||| ||||| | ||||||||||||||   || ||||| ||  |||||||||||||||||| ||| ||||| ||||||    
T  40797961 caatgaaccgaaccaactcaaaaatagttcgatacttgattcgataattggttcattgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 40797862  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||||||||||    
T  40797861 ttaagctcgttaaataaatgagttgaactt 40797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 24007909 - 24008041
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||| ||||||| || || |||| ||||| ||| |||| ||| ||| | |||||||| ||  |||||||||| || ||||| || ||||| | |    
T  24007909 tgacaatgaattgaaccaactcgaaaatagttcgagattcgatttgatgattgattcgttgaacttggttcatgaacctaacgagttaaacttgagttta 24008008  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||||||||||||||    
T  24008009 aaattaagttcgttaaataaatgagttgaactt 24008041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 25134640 - 25134576
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  25134640 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagttgaactt 25134576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 46944550 - 46944682
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| ||  | |||| ||||| ||| ||||||||||||  ||||||||| ||  |||||||||||||||||| ||| ||||| |||    
T  46944550 tgacaatgaaccgaaccaactcaaaaatagttcgagattcgattcgataattggctcgttgaacttggttcatgaaccaaatgagtcgaacttgagttga 46944649  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    || ||||| ||||||||||||| ||| ||||||    
T  46944650 aatttaagctcgttaaataaataagtcgaactt 46944682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 48151144 - 48151275
Alignment:
Q  347 gaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcg 445  Q
    |||||| || || |||| ||||||| | ||||||| ||||| || |||||| ||  ||||  ||||||||||| |||| |||||||||||||||||||||    
T  48151144 gaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggttcacaaaccaaatgagctgaacttgagctgaaaattaagttcg 48151243  T
Q  446 ttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||||| ||| |||||| | ||||||||    
T  48151244 ttaaataaataagtcgaacttgagttgtatat 48151275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 80628 - 80507
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| || ||| || || |||| |||||||||||||||| |||||   |||||||| ||  |||||||||||||||||| ||| ||||| ||||||    
T  80628 caatgaaccgatccaactcgaaaatagttcgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 80529  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    ||||| |||| |||||||||||    
T  80528 ttaagctcgtcaaataaatgag 80507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 44378329 - 44378252
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  |||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||    
T  44378329 tcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaagctcgttaaataaatgagttgaactt 44378252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 48977707 - 48977578
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||||||||| ||| || |||||| |||| |||||||| ||  |||||||||| |||||| || |  |||||||||||    
T  48977707 caatgaaccgaaccaactcgattataattcgacattcgactcgatatttaattcgttgaacttcgttcatgaacctaatgagctggacatgagctgaaaa 48977608  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||| |||||||| |||||||| |||||||    
T  48977607 ttaaattcgttaattaaatgagctgaactt 48977578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 49059831 - 49059928
Alignment:
Q  370 aatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| ||||||||| || || ||||||||||||||||||||| ||||||| || ||||||||||||||||| |||| ||| |||  |||||||    
T  49059831 aatttgatttgataattaattcattaaatttaattcatgaaccaaataagttgaattttagctgaaaattaagttcattaactaagtgaactgaactt 49059928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 1803592 - 1803500
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||| | ||||| || || ||||||||||| ||||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  1803592 gattcgataattgattcgttaaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 1803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 51407955 - 51408087
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||||||||| || || |||| ||||| | | |||||| ||||||| ||||| || ||  |||||||||||||||||| |||  || | | |    
T  51407955 tgacaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttcaacttggttcatgaaccaaatgagtcgaacctgggttta 51408054  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| ||| |||||||||||||||    
T  51408055 aaattaagttcgtcaaacaaatgagttgaactt 51408087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 52813687 - 52813603
Alignment:
Q  383 aattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||| ||  ||||||||||||| ||| |||| || ||||||||||||||||||||||| ||||||| |||||||    
T  52813687 aattaactcgttgaacttggttcatgaaccaaacgagctgaacttaagctgaaaattaagttcgttaaacaaatgagctgaactt 52813603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 7505625 - 7505531
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||| ||||||  |||||||| || ||||||||||||||||||  ||| ||||||| |||||||| |||||||| ||||||||||||||||    
T  7505625 ttgactcggtaattagttcgttgaacttgattcatgaaccaaatgagccgaacttgagctaaaaattaaattcgttaactaaatgagttgaactt 7505531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 21441715 - 21441583
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || | |||||||||    
T  21441715 tgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 21441616  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| |||||||    
T  21441615 aaattaagttcgttaattaaatgagctgaactt 21441583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 36156300 - 36156432
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| | | |||| |||| ||||||| |||| | |||||||| ||  ||| |||||||||||||  ||| |||||||||    
T  36156300 tgacaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcttgaaccaaatgagccgaacttgagctga 36156399  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| || ||| |||| |||||||    
T  36156400 aaattaagttcgtcaactaattgagctgaactt 36156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 55891991 - 55892123
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||||||||| ||  | |||| ||||| | | |||||| ||||||| |||||||| ||  ||||||||||||| |||| |||  || | | |    
T  55891991 tgacaatgaactgaaccaactcaaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacgagtcgaacctgggttta 55892090  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| ||| |||||||||||||||    
T  55892091 aaattaagttcgtcaaacaaatgagttgaactt 55892123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 19455189 - 19455296
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||| ||||||| | |||| || |||||| |||||||| ||  |||||||| |||||||| |||| ||||| ||||||||||||| ||||  ||||||||    
T  19455189 aatagttcgaaactcgatttgacaattaattcgttgaacttggttcatgaatcaaatgagctgaacttgagttgaaaattaagtttgttatctaaatgag 19455288  T
Q  459 ttgaactt 466  Q
    ||||||||    
T  19455289 ttgaactt 19455296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 477
Target Start/End: Complemental strand, 27891480 - 27891378
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgt 473  Q
    ||||||| ||||||||||||||| ||  ||||||||| ||||||| |||| ||||||||||||| || || |||||||||||||| |||| || |||| |    
T  27891480 gattcgacaattaactcgttgaacttggttcatgaac-aaatgagctgaacttgagctgaaaatcaaatttgttaaataaatgagctgaatttgaatttt 27891382  T
Q  474 atat 477  Q
    ||||    
T  27891381 atat 27891378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 28265682 - 28265808
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaa 436  Q
    ||||||||||||||| || || |||| ||||| | | |||||| ||||||| |||||||| ||  ||||||||||||| ||   |||| |||| | ||||    
T  28265682 caatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacga---gaatctgagtttaaaa 28265778  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||| ||| |||||||||||||||    
T  28265779 ttaagttcgtcaaacaaatgagttgaactt 28265808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 50710844 - 50710911
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||||| |||||||||||||    
T  50710844 ttcatgaatcaaatgagtcgaaattgagttgaaaattaagctcgttaaataaataagttgaacttaaa 50710911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 5762619 - 5762673
Alignment:
Q  403 ttcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatg 456  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  5762619 ttcatgaaccaaatgagttgagtttgagctgaaaattaaattcgttaaataaatg 5762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 5769189 - 5769243
Alignment:
Q  403 ttcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatg 456  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  5769189 ttcatgaaccaaatgggttgaatttgagctgaaaattaaattcgttaaataaatg 5769243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 426
Target Start/End: Original strand, 49061684 - 49061746
Alignment:
Q  364 attcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaatt 426  Q
    |||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  49061684 attcaaaatttcactcgataattaattcgttgaatttaattcatgaatcaaataagttgaatt 49061746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 12789561 - 12789690
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  || ||||||| || ||| |||| ||||||||||||    
T  12789561 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtttatgaacctaacgagctgaacttgagctgaaaa 12789660  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  12789661 ttaagttcgttaattaaatgagctgaactt 12789690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 13761893 - 13761824
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagtt 443  Q
    ||||||| ||||||||||||| | ||  ||||||||||||||||| |||| |||||||||||||||||||    
T  13761893 gattcgacaattaactcgttggacttggttcatgaaccaaatgagctgaatttgagctgaaaattaagtt 13761824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 53370003 - 53369874
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| |||  | |||||| ||||  ||||||| ||  |||||||||| || ||| || | ||||||||||||    
T  53370003 caatgaaccgaaccaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 53369904  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  53369903 ttaagttcgttaattaaatgagctgaactt 53369874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 49083240 - 49083364
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||  |||||| ||||| |||| || |||||| || ||||||||||    |||||| ||  ||||| |||| ||||||||||| |||| ||||    
T  49083240 tgacaatgaatcgaaccaacttgagaatagtttgaaattggactcgataattagtctgttgaacttggttcataaacctaatgagttgaacttgatctga 49083339  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    ||||||| |||||||| ||||||||    
T  49083340 aaattaaattcgttaattaaatgag 49083364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 56224279 - 56224147
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| ||  |  ||| ||||||| |||| || | |||||| |||||||| ||  || || |||||||||||  ||| |||||||||    
T  56224279 tgacaatgaaccgaaccaactcaaacatagttcgaaacttgactcaacaattaattcgttgaacttggttaataaaccaaatgagccgaacttgagctga 56224180  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| |||||||| ||||| ||||||||||    
T  56224179 aaattaaattcgttaattaaataagttgaactt 56224147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 5764647 - 5764702
Alignment:
Q  403 ttcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatga 457  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  5764647 ttcatgaaccaaataagttgagtttgagctgaaaattaaattcgttaaataaatga 5764702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 5766891 - 5766946
Alignment:
Q  403 ttcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatga 457  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  5766891 ttcatgaaccaaataagttgagtttgagctgaaaattaaattcgttaaataaatga 5766946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 466
Target Start/End: Original strand, 6866146 - 6866241
Alignment:
Q  372 tttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||| | ||||  || ||  |||||||||||||||||  ||| |||||||||||||||||||||| || ||| |||| |||||||    
T  6866146 tttgattcgataattgattcgtcaaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgtcaactaattgagctgaactt 6866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 464
Target Start/End: Original strand, 15697144 - 15697219
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaac 464  Q
    |||||||| || ||||||||||||||| || |||| ||||||| ||||||||||||||||| | |||||| |||||    
T  15697144 tcgttgaacttgattcatgaaccaaataagctgaacttgagctaaaaattaagttcgttaacttaatgagctgaac 15697219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 16742423 - 16742474
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |||| |||||||||||||||||||||||||||| ||||||| | ||||||||    
T  16742423 tgagttgaaaattaagttcgttaaataaatgagctgaacttgagttgtatat 16742474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 466
Target Start/End: Complemental strand, 24550137 - 24550079
Alignment:
Q  409 aaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  24550137 aaccaactgagttgaacttgagctaaaaattaagtttgttaactaaatgagttgaactt 24550079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 48339173 - 48339239
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||| || ||| |||| |||||||||    
T  48339173 ttcatgaatcaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttaa 48339239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 19853021 - 19852980
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  19853021 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 19852980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 22721363 - 22721330
Alignment:
Q  433 aaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||||||||||||    
T  22721363 aaaattaagttcgttaaataaatgagttgaactt 22721330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 34718221 - 34718152
Alignment:
Q  387 aactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaat 455  Q
    ||||||||||||||  || |||||| |||||||| ||| || ||||||||||||| ||||||||||||||    
T  34718221 aactcgttgaatttggtttatgaactaaatgagtcgaacttcagctgaaaattaatttcgttaaataaat 34718152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 36543824 - 36543783
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  36543824 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 36543783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 45674878 - 45674837
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  45674878 ttgagctgaaaattaaattcgttaattaaatgagttgaactt 45674837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 50606051 - 50606010
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  50606051 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 50606010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 53369731 - 53369690
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  53369731 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 53369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 9469843 - 9469779
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||   || ||||||||||||||||||||||| | |||||||| |||||||    
T  9469843 ttcatgaaccaaatgagccaaacttgagctgaaaattaagttcgttgattaaatgagctgaactt 9469779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 9959465 - 9959345
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaattgagctgaa 434  Q
    ||||||||||| |||||| || || |||| ||||||| | ||||| |||| |||||||||||| ||  |||||||| ||||          |||||||||    
T  9959465 tgacaatgaaccgaaccaactcgacaatagttcgaaactcgattctataaataactcgttgaactt-gttcatgaatcaaa----------tgagctgaa 9959377  T
Q  435 aattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||| || |||||||    
T  9959376 aattaagttcgttaaataaataagctgaactt 9959345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 28470913 - 28470821
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||||||| |||||||| ||  ||||||||||||||||||  | | ||| ||| ||||||| ||| ||||||||||||| |||||||    
T  28470913 gattcggtaattaattcgttgaacttggttcatgaaccaaatgagtcaattgtgaactgtaaattaatttcattaaataaatgagctgaactt 28470821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 38493075 - 38493115
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  38493075 tgagctgaaaattaagtttgttaattaaatgagttgaactt 38493115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 43798269 - 43798361
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttga-attgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||| |   ||| |||||||||||||| ||  |||||   ||||| ||| || |||||||||||||||||||||    
T  43798269 gattcgataattaactcgttgaactcggttcttgaaccaaatgagtcgagcttgagtaaaaaatgaagatcattaaataaatgagttgaactt 43798361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 49405641 - 49405765
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| |  || |||| ||||||| | |||||| ||||| | |||||||| ||  || ||||||||||||||| ||| ||||   ||    
T  49405641 tgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcgttgaacttggtttatgaaccaaatgagtcgaacttgaatcga 49405740  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||| |||| |||||||||||    
T  49405741 aaattaagctcgtcaaataaatgag 49405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 52706283 - 52706219
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||  ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  52706283 ttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaactt 52706219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 5728758 - 5728809
Alignment:
Q  406 atgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatg 456  Q
    |||||||||||||||||| || ||||| |||||||| |||||||||||||||    
T  5728758 atgaaccaaatgagttgagtttgagctaaaaattaaattcgttaaataaatg 5728809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 477
Target Start/End: Complemental strand, 25608850 - 25608771
Alignment:
Q  399 ttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||||| || |||||||||| |||| |||||||||||||||||| |||| |||||   |||||||| |||| |||||    
T  25608850 ttaattcattaatcaaatgagtttaatttgagctgaaaattaagttcattaattaaatagattgaacttgaattatatat 25608771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 471
Target Start/End: Original strand, 48731237 - 48731316
Alignment:
Q  393 ttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaatt 471  Q
    ||||||||  |||||||||||||| |  |||| ||||||| ||||||||||||||||| |||||||| || |||| ||||    
T  48731237 ttgaatttggttcatgaaccaaataaactgaacttgagctaaaaattaagttcgttaattaaatgagctgtacttgaatt 48731316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 34980550 - 34980636
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagtt 460  Q
    |||||||||||| | || ||||| || ||||||||| ||||||| | ||| ||||| ||||||||||  ||| ||||||||||||||    
T  34980550 gattcgataattgattcattgaacttgattcatgaatcaaatgaatcgaacttgagttgaaaattaaactcgctaaataaatgagtt 34980636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 43387353 - 43387311
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaa 415  Q
    ||||||||| ||||||||||||||||||  |||||||||||||    
T  43387353 ttgattcgacaattaactcgttgaatttggttcatgaaccaaa 43387311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 48802540 - 48802606
Alignment:
Q  393 ttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    ||||| || ||||||||||||||||||| ||| |||||  |||||||||| |||| |||||||||||    
T  48802540 ttgaacttgattcatgaaccaaatgagtcgaacttgagtcgaaaattaagctcgtcaaataaatgag 48802606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 466
Target Start/End: Complemental strand, 49821022 - 49820984
Alignment:
Q  428 agctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  49821022 agctgaaaattaagttcgttaattaaatgagctgaactt 49820984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 9222211 - 9222268
Alignment:
Q  410 accaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||| ||| ||||| || |||||||| ||||||||||||||| ||||||||    
T  9222211 accaaatgagtcgaacttgagttgtaaattaagctcgttaaataaatgaattgaactt 9222268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 38791785 - 38791728
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctg 432  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||| |||| ||||||||    
T  38791785 attcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctg 38791728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 9906362 - 9906494
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||| ||||| ||| | |||| || || |||||||||  ||||||  |||||||| || ||||||||   |||||| | ||| ||||| |||    
T  9906362 tgacaatgaactaaaccaacttaaaaatagtttgagatttgattcagtaattagttcgttgaacttgattcatgacttaaatgattcgaacttgagttga 9906461  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||  || ||| |||||| ||||||||||    
T  9906462 aaattaaactcattatataaataagttgaactt 9906494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 36644035 - 36644079
Alignment:
Q  380 gataattaactcgttgaatttaattcatgaaccaaatgagttgaa 424  Q
    |||||||||||| ||||| ||  ||||||||||||||||||||||    
T  36644035 gataattaactcattgaactttgttcatgaaccaaatgagttgaa 36644079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 41822201 - 41822145
Alignment:
Q  368 gaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa 424  Q
    |||||| || |||| ||||||||  ||||| ||||| ||||||||||||||||||||    
T  41822201 gaaattcgactcgagaattaacttattgaacttaatacatgaaccaaatgagttgaa 41822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 9505130 - 9505259
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| |||| || | ||||||| ||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||    
T  9505130 caatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagttgaacttgagctgaaaa 9505229  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||| |||||||    
T  9505230 ttaagttcgttaaataaatgagctgaactt 9505259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 28242714 - 28242585
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| ||| || || || ||||||||| || ||||||||| ||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  28242714 caatgaaccgaatcaactcgacaataattcggaacttgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaatttgagctgaaaa 28242615  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||||||||||||||  |||||||    
T  28242614 ttaaattcgttaaataaatgatctgaactt 28242585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 52934943 - 52934822
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    ||||||||||||||| ||||| |||| |||| || | ||||||||||||||||| ||||| ||  ||||||||||||||||| |||| |||||| |||||    
T  52934943 caatgaactgaaccaacttgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttgagcagaaaa 52934844  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    ||||||||||||||||||||||    
T  52934843 ttaagttcgttaaataaatgag 52934822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 12710833 - 12710704
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||| ||| |||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||| ||||||    
T  12710833 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 12710734  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||| ||||||    
T  12710733 ttaagctcgttaaataaatgagtcgaactt 12710704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 30662137 - 30662269
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||| | |||||| || || |||| || || ||| |||||||||||| |||||||||| ||  |||||||| ||||||||| ||| ||||| |||    
T  30662137 tgacaatgagccgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcatgaatcaaatgagtcgaacttgagttga 30662236  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||||||||||||||| ||||||    
T  30662237 aaattaagctcgttaaataaatgagtcgaactt 30662269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 18074670 - 18074581
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| ||||||||| |||||||||||  ||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||| ||||    
T  18074670 gatttgataattaattcgttgaatttgtttcatgaactaaatgagttgaatttgaactgaaaattaagttcgttaactaaatgagctgaa 18074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 46293277 - 46293354
Alignment:
Q  393 ttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    ||||||||  |||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  46293277 ttgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagttgaacttaaa 46293354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 52199523 - 52199431
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| |||||| |||||||| ||  ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  52199523 gattcgacaattaattcgttgaacttggttcatgaaccaaacgagctgaacttgagctgaaaattaagttcgttaaacaaatgagctgaactt 52199431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 28701070 - 28700999
Alignment:
Q  396 aatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  28701070 aatttaattcatgaaccaaataagttgaagttgaactgaaaattaaattcgttaaaaaaatgagttgaactt 28700999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 39942809 - 39942938
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    ||||||||||||||| || ||  ||| ||||||||| ||||||  ||||||   |||||| ||  |||||||||  |||||| |||| ||||||||||||    
T  39942809 caatgaactgaaccaactcgagtatagttcgaaattcgattcggcaattaatctgttgaacttggttcatgaacttaatgagctgaacttgagctgaaaa 39942908  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| ||||| |||||||    
T  39942909 ttaagttcgttaaatagatgagctgaactt 39942938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 40943627 - 40943563
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  40943627 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaactt 40943563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 468
Target Start/End: Complemental strand, 25253793 - 25253702
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||| ||| |||| |||||| ||  ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||  ||||||||    
T  25253793 tcgacaataaacttgttgaacttggttcatgaaccaaatgagctgaacttgagctaaaaattaagttcgttaaataaatgagccgaacttaa 25253702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 39135420 - 39135353
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  39135420 ttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagctgaacttaaa 39135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 26049549 - 26049678
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| || || ||| |||||||||||| ||  |||||| ||  |||||||| ||||||||| ||| ||||| ||||||    
T  26049549 caatgaaccgaaccaactcgaaaatagtttgagattcgattcgataattgacctgttgaacttggttcatgaatcaaatgagtcgaacttgagttgaaaa 26049648  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||| ||| ||||||    
T  26049649 ttaagctcgttaaataaattagtcgaactt 26049678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 32689303 - 32689171
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || | |||||||||    
T  32689303 tgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 32689204  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| |||||||    
T  32689203 aaattaagttcgttaattaaatgagctgaactt 32689171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 446
Target Start/End: Original strand, 33438737 - 33438849
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| | | || | |||| ||||||| |||| | |||||||| ||  |||||||||||||||||| ||| |||||||||    
T  33438737 tgacaatgaaccgaaccaactcgattaaagtttgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaacttgagctga 33438836  T
Q  434 aaattaagttcgt 446  Q
    |||||||||||||    
T  33438837 aaattaagttcgt 33438849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 5418755 - 5418680
Alignment:
Q  392 gttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||| ||||||||||||| |||| ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  5418755 gttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagttcgttaactaaatgagttgaactt 5418680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 50965492 - 50965405
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaa-ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||  ||||| |||||  |||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  50965492 ataattagttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaactt 50965405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 51068627 - 51068540
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaa-ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||  ||||| |||||  |||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  51068627 ataattagttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaactt 51068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 484
Target Start/End: Original strand, 39469541 - 39469687
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaat 437  Q
    |||||||||||||| || ||  ||| |||| |||| ||||||||||||    | ||||| ||  |||||||| ||||||||  ||| |||||||||||||    
T  39469541 aatgaactgaaccaactcgaatatagttcgtaattcgattcgataattggtccattgaacttggttcatgaatcaaatgagccgaacttgagctgaaaat 39469640  T
Q  438 taagttcgttaaataaatgagttgaacttaaattgtatattcttcga 484  Q
    |||||||||||| |||||||| | ||||| |||| || ||| |||||    
T  39469641 taagttcgttaattaaatgagctaaacttgaattatagattgttcga 39469687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 20550211 - 20550340
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaa 436  Q
    ||||||||  ||||| || || |||| ||||| | | |||||||||||| | | |||||| ||  |||| ||||||||||||| |||  |||| ||||||    
T  20550211 caatgaaccaaaccaactcgaaaatagttcgatactcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacatgagttgaaaa 20550310  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||| |||||||||||||||||||| ||||    
T  20550311 ttaaattcgttaaataaatgagttgtactt 20550340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 54393452 - 54393573
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| |||| ||||||| |||| | |||||||| ||  ||||| |||||||||||  ||| ||||||||||||    
T  54393452 caatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcataaaccaaatgagccgaacttgagctgaaaa 54393551  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    |||||||||| |||||| ||||    
T  54393552 ttaagttcgtcaaataattgag 54393573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 54432265 - 54432329
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  54432265 ttcatgaactaaatgagtcgaacttgagttaaaaattaagctcgttaaataaatgagttgaactt 54432329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 55452744 - 55452800
Alignment:
Q  403 ttcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaatgagt 459  Q
    ||||||||||||| |||||||||| |||| ||| ||||||||||||| |||||||||    
T  55452744 ttcatgaaccaaacgagttgaattaagctaaaacttaagttcgttaactaaatgagt 55452800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 477
Target Start/End: Complemental strand, 1674759 - 1674620
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaat 437  Q
    ||||||| |||||| || || |||| |||  |||| ||||| | ||||| || |||||| ||  |||||||||||||||||||||| || ||||||||||    
T  1674759 aatgaaccgaaccaactcgacaatagttcagaattcgattcaacaattatcttgttgaacttggttcatgaaccaaatgagttgaacttaagctgaaaat 1674660  T
Q  438 taagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |  ||  ||||||||||| || ||||||| | ||||||||    
T  1674659 tttgtatgttaaataaataagctgaacttgagttgtatat 1674620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 52199446 - 52199391
Alignment:
Q  412 caaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  52199446 caaatgagctgaacttgagctgaaaattaagttcgttaaacaaatgagctgaactt 52199391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Complemental strand, 41609992 - 41609890
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| || | ||||||||||||||||||||||||| |||||||| ||||    
T  41609992 ttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaa 41609893  T
Q  464 ctt 466  Q
    |||    
T  41609892 ctt 41609890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 471
Target Start/End: Original strand, 15822380 - 15822492
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||| ||||||||| |||||| |||||   |||||||| ||  ||||||| |||| ||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  15822380 aatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgatccaattgagtagaacttgagttgaaaattaagctcgtcaaataaatgag 15822479  T
Q  459 ttgaacttaaatt 471  Q
      |||||| ||||    
T  15822480 ccgaacttgaatt 15822492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 18652528 - 18652579
Alignment:
Q  406 atgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatg 456  Q
    |||||||||||||||||| || ||||| |||||||| |||||||||||||||    
T  18652528 atgaaccaaatgagttgagtttgagctaaaaattaaattcgttaaataaatg 18652579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 468
Target Start/End: Complemental strand, 28687115 - 28687072
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||||||||||||||||||||||||| ||| | |||||||    
T  28687115 ttgagctgaaaattaagttcgttaaataaacgagctcaacttaa 28687072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 466
Target Start/End: Complemental strand, 31589731 - 31589624
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||||||| |||||||||||| |||| || || ||| | ||  ||||| |||||||| |||  || ||||| ||||||||||||| |||||||||| | |    
T  31589731 aataattcaaaatttgattcggtaatcaattcattggacttggttcataaaccaaataagtcaaacttgagttgaaaattaagtttgttaaataaacggg 31589632  T
Q  459 ttgaactt 466  Q
    ||||||||    
T  31589631 ttgaactt 31589624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 30743654 - 30743593
Alignment:
Q  387 aactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgtt 447  Q
    ||||||||||| ||  ||||||||||||||||| |||| ||||| ||| |||||||||||||    
T  30743654 aactcgttgaacttggttcatgaaccaaatgagctgaatttgagttgagaattaagttcgtt 30743593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 42145721 - 42145688
Alignment:
Q  148 gtgaagtatgatagttcttttcaactatgattgt 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  42145721 gtgaaatatgatagttcttttcaactatgattgt 42145688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 1072758 - 1072830
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttga-attgagctgaaaattaagttcgttaa 449  Q
    ||||||||| | |||||| | | | |||||||||||||||||||||  |||||| |||||||||||| |||||    
T  1072758 tcgataattgattcgttggactaagttcatgaaccaaatgagttgagtttgagccgaaaattaagtttgttaa 1072830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 25582625 - 25582685
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaa 449  Q
    ||||| ||||| |||||| || ||||||| ||||||| ||| |||||||||||||||||||    
T  25582625 tcgttaaatttgattcataaatcaaatgaattgaatttgagttgaaaattaagttcgttaa 25582685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 45581014 - 45581144
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| ||||| |||| ||||||| | ||||||||||||| ||||||||| ||  |||||||||||||||||||||| |||||| ||    
T  45581014 tgacaatgaaccgaaccaacttgaaaatagttcgaaactcgattcgataattatctcgttgaacttggttcatgaaccaaatgagttgaacttgagcgga 45581113  T
Q  434 aaattaagttcgttaaataaatgagttgaac 464  Q
    ||||||||||| |||| |||||||| |||||    
T  45581114 aaattaagttcattaactaaatgagatgaac 45581144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 28006481 - 28006352
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||| ||| |||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||| ||||||    
T  28006481 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 28006382  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||| ||||||    
T  28006381 ttaagctcgttaaataaatgagtcgaactt 28006352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 44596648 - 44596524
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| || | || | ||||||| ||||||||||||||||||  ||||||||||||||||| |||| |||| |||||||    
T  44596648 caatgaaccgaaccaactcgacaatagtttggaactcgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaacttgaactgaaaa 44596549  T
Q  437 ttaagttcgttaaataaatgagttg 461  Q
    |||||||||||||||||||||||||    
T  44596548 ttaagttcgttaaataaatgagttg 44596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 24576043 - 24575911
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| |||||||||||||||| |||||||||| ||  ||||||||||||||||   ||| ||||| |||    
T  24576043 tgacaatgaaccgaaccaactcgaaaatagttcgagatttgattcgataattgactcgttgaacttggttcatgaaccaaatgaaacgaacttgagttga 24575944  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| | ||||||||||||||| ||||||    
T  24575943 aaattaagcttgttaaataaatgagtcgaactt 24575911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 375 - 472
Target Start/End: Original strand, 5204515 - 5204613
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattg 472  Q
    |||||||||||| |||||||||| ||  ||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  5204515 gattcgataattgactcgttgaacttggttcgtgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagtcgaacttgaattg 5204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 15306624 - 15306503
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| ||||| |||| |||| || | |||||||||||||| || ||||| ||  ||||||||||||||||| |||| |||||| |||||    
T  15306624 caatgaaccgaaccaacttgacaatagttcggaactcgattcgataattaattcattgaacttggttcatgaaccaaatgagctgaacttgagcggaaaa 15306525  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    |||||||| |||||||||||||    
T  15306524 ttaagttcattaaataaatgag 15306503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 23915633 - 23915746
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    ||||||| | ||||| | ||||| ||||||||| ||  ||||||||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||    
T  23915633 ttcgaaactcgattcaacaattatctcgttgaacttggttcatgaaccaaatgagctgaactttagctgaaaattaagttcattaaataaatgagttgaa 23915732  T
Q  464 cttaaattgtatat 477  Q
    ||| | ||||||||    
T  23915733 cttgagttgtatat 23915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 14101996 - 14101853
Alignment:
Q  336 gacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctg-a 433  Q
    |||||||| | |||||| |||||||||| ||| ||| | ||||||| ||||| ||| ||||| ||| ||||||||||||||||| |||| |||||||| |    
T  14101996 gacaatgatccgaaccaacttgataatagttccaaactcgattcgacaattatctcattgaacttagttcatgaaccaaatgagctgaatttgagctgaa 14101897  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||| ||||||||||||| |||  |||||| | ||||||||    
T  14101896 aaattaaattcgttaaataaacgagccgaactttagttgtatat 14101853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 27076521 - 27076653
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||| ||||||| ||||| |||| ||  | | |||||||||||||||| |||||||| ||  | ||||||| |||||||  ||| ||||||| |    
T  27076521 tgacaatgaattgaaccaacttgaaaatagtttaagacttgattcgataattaattcgttgaacttggtccatgaactaaatgagccgaacttgagctca 27076620  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    || |||||||||||||||||| |||||||||||    
T  27076621 aagttaagttcgttaaataaacgagttgaactt 27076653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 50447475 - 50447343
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||  ||||| || || |||| ||||| | | |||||||||||||| ||||| || ||  || ||||||||||||||  ||| |||| || |    
T  50447475 tgacaatgaaccaaaccaactcgaaaatagttcgagactcgattcgataattaattcgttaaacttggtttatgaaccaaatgagccgaacttgaactta 50447376  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||||||||||||||    
T  50447375 aaattaagttcgttaaataaatgagttgaactt 50447343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 455
Target Start/End: Complemental strand, 30251520 - 30251437
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaat 455  Q
    |||||||||||||||||||||||| |||  ||||||||| |||||| ||||| ||||||| ||||||||||||||||| |||||    
T  30251520 ttgattcgataattaactcgttgagtttggttcatgaactaaatgaattgaacttgagctaaaaattaagttcgttaactaaat 30251437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 458
Target Start/End: Complemental strand, 31869703 - 31869604
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||| |||| || ||||||||| |||||| |||||||| ||  |||||||||||||||||  ||| || |||||||||||||||||||||||||||||||    
T  31869703 aatagttcggaacttgattcgacaattaaatcgttgaacttggttcatgaaccaaatgagccgaacttaagctgaaaattaagttcgttaaataaatgag 31869604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 471
Target Start/End: Complemental strand, 7996105 - 7995968
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| ||||| |||| ||||| ||| |||||||||||| | |||||||| ||  ||||| |||| ||||||| ||| || || | |    
T  7996105 tgacaatgaaccgaaccaacttgaaaatagttcgagattcgattcgataattgattcgttgaacttggttcataaacctaatgagtcgaacttaagttta 7996006  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaatt 471  Q
    |||||||| |||||||||||||||| | ||||| ||||    
T  7996005 aaattaagctcgttaaataaatgagctcaacttgaatt 7995968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 40159639 - 40159768
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| || || ||| ||||||||||||   || ||| | ||  |||||||| ||||||||| ||| ||||| ||||||    
T  40159639 caatgaaccgaaccaactcgaaaatagtttgatattcgattcgataattggttcattggacttggttcatgaatcaaatgagtcgaacttgagttgaaaa 40159738  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||||||||    
T  40159739 ttaagttcgttaaataaatgagttgaactt 40159768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 47602868 - 47603000
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| || | |||||||||    
T  47602868 tgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 47602967  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| |||||||    
T  47602968 aaattaagttcgttaattaaatgagctgaactt 47603000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 12224581 - 12224684
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| |||| |||| ||||||| ||||||||||||||| ||  |||||||||||||||||  ||| |||||||||    
T  12224581 tgacaatgaaccgaaccaactcgacaatagttcggaattcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagccgaacttgagctga 12224680  T
Q  434 aaat 437  Q
    ||||    
T  12224681 aaat 12224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 20347766 - 20347671
Alignment:
Q  369 aaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||| |||| |||||| ||||||||||| ||||||| ||||||||||  ||| || || ||||||||||||||||||| |||||||| ||||    
T  20347766 aaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaattaagttcgttaattaaatgagctgaa 20347671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 51432257 - 51432352
Alignment:
Q  383 aattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||||||||| | ||  |||||||||||||||||||||| || |||||||||||||  ||||||||||||| || ||||||| | ||||||||    
T  51432257 aattaactcgttgtacttggttcatgaaccaaatgagttgaaattaagctgaaaattaaaatcgttaaataaattagctgaacttgagttgtatat 51432352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 14796684 - 14796590
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||||||||| ||||||||  |  |||||||||||| | ||||||| |||| ||  |||||||||||||||||||||||||||||||||    
T  14796684 ttgactcgataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactt 14796590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 14805558 - 14805464
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||||||||| ||||||||  |  |||||||||||| | ||||||| |||| ||  |||||||||||||||||||||||||||||||||    
T  14805558 ttgactcgataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactt 14805464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 47983389 - 47983255
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| ||| |||||||||||| | | |||||| ||  |||| ||||||||||||| ||| ||||| | |    
T  47983389 tgacaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacttgagttaa 47983290  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaa 468  Q
    ||  |||  ||||||||||||||||||||||||||    
T  47983289 aatctaaactcgttaaataaatgagttgaacttaa 47983255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 7596524 - 7596395
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| ||||||||||||||||| | |||| ||| ||  || ||||||||||||||  ||| ||||||||||||    
T  7596524 caatgaaccgaaccaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgagctgaaaa 7596425  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| ||| ||| |||| |||||||    
T  7596424 ttaagttcgctaactaattgagctgaactt 7596395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 463
Target Start/End: Original strand, 15257245 - 15257306
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||    
T  15257245 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaa 15257306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 24469826 - 24469955
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| || | ||||||||||||    
T  24469826 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 24469925  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  24469926 ttaagttcgttaattaaatgagctgaactt 24469955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 32179989 - 32179860
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  ||||| |||| |||||| || | ||||||||||||    
T  32179989 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcataaacctaatgagctggacttgagctgaaaa 32179890  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  32179889 ttaagttcgttaattaaatgagctgaactt 32179860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 35810849 - 35810728
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| |||| ||||||| |||| | |||||||| ||  |||||||||||||||||  ||| ||||||||||||    
T  35810849 caatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagccgaacttgagctgaaaa 35810750  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    |||||||||| |||||| ||||    
T  35810749 ttaagttcgtcaaataattgag 35810728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 38061187 - 38061316
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| | ||| ||| |||| ||||||| | |||||||| || ||| ||||||| ||||||| ||| || || | ||||    
T  38061187 caatgaaccgaaccaactcgaaaatagtgcgagattcgatttgataattgattcgttgaacttgatttatgaacctaatgagtcgaacttaagtttaaaa 38061286  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||||||||||    
T  38061287 ttaagctcgttaaataaatgagttgaactt 38061316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 458
Target Start/End: Complemental strand, 31816702 - 31816578
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||||| |  ||||| ||||| | |||||||| ||  |||||||||||||||||||||| || ||  ||    
T  31816702 tgacaatgaaccgaaccaactcgaaaatagttcgaaactcaattcggtaattgattcgttgaacttggttcatgaaccaaatgagttgaacttcagtcga 31816603  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||| |||| |||||||||||    
T  31816602 aaattaagctcgtcaaataaatgag 31816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 458
Target Start/End: Original strand, 39802841 - 39802897
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  39802841 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgag 39802897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 468
Target Start/End: Complemental strand, 7702966 - 7702835
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||| | || ||| || | ||||||||||||    
T  7702966 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaagctaacgagctggacttgagctgaaaa 7702867  T
Q  437 ttaagttcgttaaataaatgagttgaacttaa 468  Q
    ||||||||||||| |||||||| |||||||||    
T  7702866 ttaagttcgttaattaaatgagctgaacttaa 7702835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 20349246 - 20349151
Alignment:
Q  369 aaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||| ||||||||||| |||||||| || ||||||  ||||||||||  ||| || || ||||||||||||||||||| |||||||| ||||    
T  20349246 aaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaattaagttcgttaattaaatgagctgaa 20349151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 21680665 - 21680776
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| ||||||||| || |||| ||||||| | ||||||||||||| ||||||||| ||  || |||||  |||||||  ||| ||||||| ||||    
T  21680665 caatgaaccgaaccagctcgaaaatagttcgaaactcgattcgataattatctcgttgaacttggtttatgaatgaaatgagccgaacttgagctaaaaa 21680764  T
Q  437 ttaagttcgtta 448  Q
    ||||||||||||    
T  21680765 ttaagttcgtta 21680776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 42916150 - 42916252
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| |||| |||||||||||| | |||| ||| ||  |||||||||||||||||  ||| ||||||||||||||||||||| ||| ||| |||| ||||    
T  42916150 ttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaa 42916249  T
Q  464 ctt 466  Q
    |||    
T  42916250 ctt 42916252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 25124894 - 25125023
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| |||| |||| ||||||| | |||||||| ||  |||||||||||||||||  ||| ||||||||||||    
T  25124894 caatgaaccgaaccaactcgattaaagttcgtaattcgatttgataattgattcgttgaacttggttcatgaaccaaatgagccgaacttgagctgaaaa 25124993  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||| || ||| |||| |||||||    
T  25124994 ttaatttcgtgaactaattgagctgaactt 25125023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 29677528 - 29677657
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||| | | |||| |||||||   |||||||| ||  |||| ||||||||||||| ||| ||||| ||||||    
T  29677528 caatgaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttgagttgaaaa 29677627  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| || ||||||||||||| |||||||    
T  29677628 ttaagctctttaaataaatgagctgaactt 29677657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 36419232 - 36419103
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||| ||| ||  |||||||||| |||||| || | |||||| |||||    
T  36419232 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgtcgaacttggttcatgaacctaatgagctggacttgagccgaaaa 36419133  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  36419132 ttaagttcgttaattaaatgagctgaactt 36419103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 15014446 - 15014339
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| |||| |||||||||||| | |||| ||| || ||||||||||||||||||  ||| ||||| ||||||    
T  15014446 caatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgaaccaaatgagccgaacttgagttgaaaa 15014347  T
Q  437 ttaagttc 444  Q
    ||||||||    
T  15014346 ttaagttc 15014339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 48575127 - 48575218
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||| |||||||| ||  ||||||||||||| || | ||| ||||  | |||||||||||||| |||||||||||||||||||    
T  48575127 attcggtaattaattcgttgaacttggttcatgaaccaaacgaatcgaacttgaatttaaaattaagttcgtcaaataaatgagttgaactt 48575218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 3577765 - 3577672
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa--ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| | ||||||||||||| ||  |||||||| ||||||| || ||  |||||||||||| | | ||||||||||||||||| |||||||    
T  3577765 gattcgacagttaactcgttgaacttggttcatgaatcaaatgaattaaaacttgagctgaaaaattaattcgttaaataaatgagctgaactt 3577672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 46264980 - 46265082
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| |||| |||||||||||| | |||| ||| ||  ||||||||| |||||||  ||| ||||||||||||||||||||| ||| ||| |||| ||||    
T  46264980 ttcgtaattcgattcgataattgattcgtcgaacttggttcatgaactaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaa 46265079  T
Q  464 ctt 466  Q
    |||    
T  46265080 ctt 46265082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 8828303 - 8828364
Alignment:
Q  406 atgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||| ||||| ||||||||||    
T  8828303 atgaaccaaatgaattgaacttgagctgaaaattaagtctgttaactaaataagttgaactt 8828364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 33233623 - 33233688
Alignment:
Q  402 attcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| ||||| ||||||| ||||||||||||||||| ||||||| |||| ||||| |||||    
T  33233623 attcatgaatcaaataagttgaacttgagctgaaaattaaggtcgttaactaaacgagtttaactt 33233688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 34412020 - 34411959
Alignment:
Q  384 attaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttc 444  Q
    |||||||||||||||||||||||||||  ||||||||| || ||| | ||||||||||||||    
T  34412020 attaactcgttgaatttaattcatgaattaaatgagtttaatttgggttgaaaattaagttc 34411959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 37441283 - 37441324
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  37441283 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 37441324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 2141590 - 2141629
Alignment:
Q  143 ttatggtgaagtatgatagttcttttcaactatgattgtc 182  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  2141590 ttatggtggagtatgatagttcttttgaactatgattgtc 2141629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 28020680 - 28020602
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||||||| ||||| || ||| |||||||| ||||||||||||| |||| |||| ||||||||||  ||| ||||||||    
T  28020680 ataattaattcgttaaacttagttcatgaatcaaatgagttgaacttgaactgataattaagttctctaactaaatgag 28020602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 19508607 - 19508534
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttga 462  Q
    |||||||| ||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| ||||||||||||    
T  19508607 tcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttga 19508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 42937205 - 42937076
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    ||||||||||||||| || ||| | | |||| |||| ||||| | |||| | |||| ||| ||  |||||||| ||||||||  ||| ||||||| ||||    
T  42937205 caatgaactgaaccaactcgattagagttcgtaattcgattcaacaattgattcgtcgaacttggttcatgaatcaaatgagccgaacttgagcttaaaa 42937106  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||| || ||| |||| |||||||    
T  42937105 ttaagttcgtcaactaattgagctgaactt 42937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 418
Target Start/End: Complemental strand, 7841753 - 7841674
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatga 418  Q
    |||||||| |||||| || || |||| ||||| | | |||||||||||||| |||||||| ||  ||||||||||||||||    
T  7841753 caatgaaccgaaccaactcgaaaata-ttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatga 7841674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 7956390 - 7956326
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| |||| ||| ||| ||||  ||||||||||| | ||||||||||||||||||||||    
T  7956390 ttcatgaacaaaattagtcgaacttgaattgaaaattaagcttgttaaataaatgagttgaactt 7956326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 469
Target Start/End: Original strand, 13157161 - 13157197
Alignment:
Q  433 aaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13157161 aaaattaagtttgttaaataaatgaattgaacttaaa 13157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 13953203 - 13953305
Alignment:
Q  88 tttttgacatttggaaattcttggagggattttagtttcgagggaagtgtactcattatggtgaagtatgatagttcttttcaactatgattgtcaatta 187  Q
    |||| ||||| |||||||||||| || ||||| || |||||  ||| | ||||||||||| || || |||| ||||||||| || ||||||||||||| |    
T  13953203 ttttcgacatgtggaaattcttg-agcgattt-agcttcgattgaaatatactcattatgatggagcatgacagttcttttgaaatatgattgtcaatga 13953300  T
Q  188 agaca 192  Q
    |||||    
T  13953301 agaca 13953305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 13953345 - 13953385
Alignment:
Q  137 tactcattatggtgaagtatgatagttcttttcaactatga 177  Q
    ||||| ||||| |||||||||||||||||||| ||||||||    
T  13953345 tactctttatgatgaagtatgatagttcttttgaactatga 13953385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 446
Target Start/End: Original strand, 14578591 - 14578703
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| | | |||| |||| |||| || |||| | | |||||| ||  |||||||||||||||||  ||| | |||||||    
T  14578591 tgacaatgaaccgaaccaactcgattagagttcgtaattcgattagacaattgatttgttgaacttggttcatgaaccaaatgagccgaactggagctga 14578690  T
Q  434 aaattaagttcgt 446  Q
    |||||||||||||    
T  14578691 aaattaagttcgt 14578703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 40002960 - 40002896
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||||||  ||| ||||| |||||||||||||||| || ||| ||||||||||||    
T  40002960 ttcatgaatcaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagttgaactt 40002896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 43087540 - 43087604
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||  ||| |||| || || |||||||||||||| ||||||||||||||||    
T  43087540 ttcatgaaccaaacgagccgaacttgaactaaagattaagttcgttaattaaatgagttgaactt 43087604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 335 - 477
Target Start/End: Original strand, 19282120 - 19282263
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||| |||||||| || ||||||| |||| || || |||||| ||||||||||||||| ||  ||||||||||||||||| |||| |||||||||    
T  19282120 tgacaatgagctgaaccaactcgataatagttcggaacttcattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctga 19282219  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||| ||||||||| || ||||| ||||||| || |||||||    
T  19282220 aaattaggttcgttaagtagatgagctgaacttgaactgtatat 19282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 27450590 - 27450719
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| | ||| ||| |||||||||||| | ||||||||||| ||||||||||| ||||||| ||| ||||| | ||||    
T  27450590 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaatttgattcatgaacctaatgagtcgaacttgagtttaaaa 27450689  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||||||||||    
T  27450690 ttaagctcgttaaataaatgagttgaactt 27450719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 458
Target Start/End: Original strand, 40056373 - 40056493
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaat 437  Q
    |||||| | ||||| || ||||||| || |||||| ||||||| ||||| ||||||||||||  |||||||||||||| |||| || ||||| |||||||    
T  40056373 aatgaattaaaccaactcgataatagtttgaaattcgattcgacaattatctcgttgaatttggttcatgaaccaaataagttaaatttgagatgaaaat 40056472  T
Q  438 taagttcgttaaataaatgag 458  Q
    |||||||||||||||||||||    
T  40056473 taagttcgttaaataaatgag 40056493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 1840734 - 1840825
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| |||||||    
T  1840734 attcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaattaagttcgtgaaataaatgagctgaactt 1840825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 27196211 - 27196079
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| | | |||||||||||| | ||||| |||||  |||||||||||||||||| ||| ||||| |||    
T  27196211 tgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttaaatttggttcatgaaccaaatgagtcgaacttgagttga 27196112  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| |||||| ||||| |||||||||||    
T  27196111 aaattaagctcgttagataaaggagttgaactt 27196079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 34719666 - 34719795
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||  |||||| || || |||| | ||| |||||||||||||||| | |||||||| || ||||||||||  ||||||| ||| ||||| | ||||    
T  34719666 caatgaaacgaaccaactcgaaaatagtgcgagatttgattcgataattgattcgttgaacttgattcatgaacttaatgagtcgaacttgagtttaaaa 34719765  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||||||||||    
T  34719766 ttaagctcgttaaataaatgagttgaactt 34719795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 31621002 - 31620870
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| |||||  ||| ||||||||| || |||| |||||   | ||||||||  |||||||||| ||||||||||| || ||||||    
T  31621002 tgacaatgaaccgaaccaacttgaatatagttcgaaattcgactcgacaattagtccattgaatttggttcatgaacctaatgagttgaacttcagctga 31620903  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    | |||||||||||||| |||||||| |||||||    
T  31620902 atattaagttcgttaattaaatgagctgaactt 31620870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 465
Target Start/End: Original strand, 34724763 - 34724891
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| ||||| |||| |  || ||| |||| ||||||| | |||||||| || ||||||||||| ||||||| ||| ||||| | ||||    
T  34724763 caatgaaccgaaccaacttgaaaatagtgtgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 34724862  T
Q  437 ttaagttcgttaaataaatgagttgaact 465  Q
    ||||| |||||||||||||||||||||||    
T  34724863 ttaagctcgttaaataaatgagttgaact 34724891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 39407500 - 39407408
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||| | |||||||| || ||||||||||| ||||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  39407500 gattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 39407408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 469
Target Start/End: Complemental strand, 24536137 - 24536006
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaat 437  Q
    |||||||||||||| ||||| |||| ||| | | || ||| ||||||||| | ||||||| |  |||||||| |||||||| | |||| ||||| |||||    
T  24536137 aatgaactgaaccaacttgaaaatagttcaagacttaatttgataattaatttgttgaatctggttcatgaatcaaatgagctaaatttgagctcaaaat 24536038  T
Q  438 taagttcgttaaataaatgagttgaacttaaa 469  Q
    ||||||||||||||||| |||||||| |||||    
T  24536037 taagttcgttaaataaacgagttgaatttaaa 24536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 469
Target Start/End: Complemental strand, 26298405 - 26298310
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||| | |||||||| || ||||||||||| |||||||  || ||||| | ||||||||| |||||||||||||||||||||||||||    
T  26298405 gattcgataattgattcgttgaacttgattcatgaacctaatgagtcaaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 26298310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 31021997 - 31021863
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||  ||| |||| || | || ||||||||||||||||||| |||  ||||||||||||||||| |||| |||||||      
T  31021997 tgacaatgaaccgaaccaactcgaatatagttcggaactcgactcgataattaactcgttgagtttggttcatgaaccaaatgagctgaatttgagcttg 31021898  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||||| ||||| |||||||| |||| ||||    
T  31021897 aaattaagtttgttaactaaatgagctgaatttaa 31021863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 39414312 - 39414183
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa--ttgagctgaaaa 436  Q
    ||||||| |||||| || || |||| ||||||| || |||||| ||||||||||||||| ||  | |||||||| |||||| ||||  || || | ||||    
T  39414312 aatgaaccgaaccaactcgacaatagttcgaaacttaattcgacaattaactcgttgaacttggtccatgaacctaatgagctgaactttaagttaaaaa 39414213  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||| |||||||    
T  39414212 ttaagttcgttaaataaatgagctgaactt 39414183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 3801438 - 3801502
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  3801438 ttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagttgaactt 3801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 26299977 - 26299849
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaat 437  Q
    ||||||| |||||| || || |||| | ||| ||| |||||||||||| | |||||||| || ||||||||||| |||||||  || ||||| | |||||    
T  26299977 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttcattcatgaacctaatgagtcaaacttgagtttaaaat 26299878  T
Q  438 taagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||||||||||||| ||||||||    
T  26299877 taagctcgttaaataaatgaattgaactt 26299849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 34723705 - 34723791
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| | |||||||| || ||||||||||| ||||||| ||||| ||| | ||||||||| ||||||||||||||||||||||||    
T  34723705 ataattgattcgttgaacttgattcatgaacctaatgagtcgaatttgagtttaaaattaagctcgttaaataaatgagttgaactt 34723791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 19716277 - 19716185
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||| | |||||||| || ||||||||||| ||||||| ||| || || | ||||||||| ||||||||||||||| ||||||||    
T  19716277 gattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttaagtttaaaattaagctcgttaaataaatgaattgaactt 19716185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 469
Target Start/End: Complemental strand, 34857440 - 34857346
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||| |||||| | |||||||| || ||||||||| | ||||||| ||| ||||| | ||||||||| |||||||||||||||||| ||||||||    
T  34857440 attcaataattgattcgttgaacttgattcatgaatctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttaaacttaaa 34857346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 420
Target Start/End: Original strand, 5382831 - 5382916
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagt 420  Q
    |||||||||||||||||| ||||| || | ||||| | | |||||| ||||||| |||||||| || |||||||||||||| ||||    
T  5382831 tgacaatgaactgaaccaacttgaaaagagttcgagactcgattcggtaattaattcgttgaacttgattcatgaaccaaacgagt 5382916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 27906229 - 27906100
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || | ||||||||||||    
T  27906229 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 27906130  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  27906129 ttaagttcgttaattaaatgagctgaactt 27906100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 38522870 - 38522999
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||  ||| |||| ||||||| |||||||||    | ||||| ||  |||||||||||||||||   || ||||||||||||    
T  38522870 caatgaaccgaaccaactcgaatatagttcgtaatttgactcgataattggtccattgaacttggttcatgaaccaaatgagccaaacttgagctgaaaa 38522969  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  38522970 ttaagttcgttaattaaatgagctgaactt 38522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 39409207 - 39409142
Alignment:
Q  402 attcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||| ||||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  39409207 attcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 39409142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 41783404 - 41783327
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  |||||||||||||||||  ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  41783404 tcgttgaacttggttcatgaaccaaatgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaactt 41783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 1225450 - 1225362
Alignment:
Q  370 aatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatga 457  Q
    |||| ||||||||||||   |||||||| ||| || ||||||||||||||| ||| ||||| ||||||||||| |||| ||||||||||    
T  1225450 aattcgattcgataattgtttcgttgaacttagtttatgaaccaaatgagtcgaacttgagttgaaaattaagctcgtcaaataaatga 1225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 16388095 - 16388139
Alignment:
Q  152 agtatgatagttcttttcaactatgattgtcaattaagacaatgt 196  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  16388095 agtatgatagttcttttgaactatgattgtcaatgaagacaatgt 16388139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 18880326 - 18880194
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || | || ||||||    
T  18880326 tgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttaagctga 18880227  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| |||||||    
T  18880226 aaattaagttcgttaattaaatgagctgaactt 18880194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 20189107 - 20188975
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| ||| || || ||| | | |||| ||||||||||||||||| | |||| ||| ||  |||||||||||||||||  ||| |||| || |    
T  20189107 tgacaatgaaccgaatcaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgaactaa 20189008  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| || ||| |||| |||||||    
T  20189007 aaattaagttcgtcaactaattgagctgaactt 20188975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 32945027 - 32945151
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||||| | |||||| ||||| | ||||| || ||  |||||||||||||||||| ||| |||||   |    
T  32945027 tgacaatgaaccgaaccaactcgaaaatagttcgaaactcgattcggtaattgattcgttaaacttggttcatgaaccaaatgagtcgaacttgagtcaa 32945126  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||| |||| |||||||||||    
T  32945127 aaattaagctcgtcaaataaatgag 32945151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 458
Target Start/End: Complemental strand, 29328177 - 29328054
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaattgagctgaa 434  Q
    ||||||||||| |||| | || ||| ||| ||||| ||| || |||||| ||||  ||||||| || ||||||||||| ||    | || ||||||||||    
T  29328177 tgacaatgaaccgaacaaactcgattatagttcgacattcgactcgatatttaatccgttgaacttgattcatgaacctaacagctggacttgagctgaa 29328078  T
Q  435 aattaagttcgttaaataaatgag 458  Q
    ||||||||||||||| ||||||||    
T  29328077 aattaagttcgttaattaaatgag 29328054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 466
Target Start/End: Complemental strand, 10494045 - 10493987
Alignment:
Q  409 aaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||| ||| ||||| ||||||||||| |||||||||||||||| |||||||    
T  10494045 aaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagctgaactt 10493987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 14500755 - 14500844
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||  |||||||| ||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| | ||||||||||||||    
T  14500755 tcgataattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactgaatgagttgaactt 14500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 28246799 - 28246734
Alignment:
Q  402 attcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||  || |||||||||||||||||||||    
T  28246799 attcacgaaccaaatgagtcgaacttgagttgaaaattaaactcattaaataaatgagttgaactt 28246734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 446
Target Start/End: Complemental strand, 2676082 - 2676038
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgt 446  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  2676082 ttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgt 2676038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 43386769 - 43386729
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  43386769 tgagctgaaaattaagttctttaaataaatgaattgaactt 43386729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 34981118 - 34981067
Alignment:
Q  143 ttatggtgaagtatgatagttcttttcaactatgattgtcaattaagacaat 194  Q
    ||||| || ||||||||||||||||| ||||||||||||| || ||||||||    
T  34981118 ttatgatggagtatgatagttcttttgaactatgattgtccatgaagacaat 34981067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 455
Target Start/End: Complemental strand, 5028975 - 5028905
Alignment:
Q  386 taactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaat 455  Q
    |||||| ||||| || |||||| ||||||||||| | |||| |||||||||||||||||| |||| |||||    
T  5028975 taactcattgaacttcattcataaaccaaatgagataaatttgagctgaaaattaagttcattaattaaat 5028905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 3457861 - 3457828
Alignment:
Q  433 aaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||||||| ||||    
T  3457861 aaaattaagttcgttaaataaatgagttggactt 3457828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 11136103 - 11136144
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| || |||||||||||||| ||||||||||||||||    
T  11136103 ttgagctaaagattaagttcgttaactaaatgagttgaactt 11136144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 26218126 - 26218049
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| |||||||||| |||||    
T  26218126 tcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttaaactt 26218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 32157034 - 32157075
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||||| |||||||| |||||||    
T  32157034 ttgagttgaaaattaagttcgttaattaaatgagctgaactt 32157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 1091217 - 1091126
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||| || |||||||| ||| ||||  ||| ||||| || ||| ||||| | ||||| |||||| |||||||||||||||||||||    
T  1091217 gattcgataatgaattcgttgaacttagttcacaaactaaatgggtcgaacttgagttaaaaat-aagttcattaaataaatgagttgaactt 1091126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 338 - 463
Target Start/End: Original strand, 3409197 - 3409323
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||||| | ||||||| ||||||||||||||| ||  ||||||||||||||||  |||| ||||||||||||    
T  3409197 caatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgaactgaacttgagctgaaaa 3409296  T
Q  437 ttaagttcgttaaataaatgagttgaa 463  Q
    |||||||||||||||||||||| ||||    
T  3409297 ttaagttcgttaaataaatgagctgaa 3409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 477
Target Start/End: Original strand, 24844672 - 24844815
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||| | |||||| || ||||||| ||||||| | ||||||  ||||| ||||||||| ||  ||||||||||||||||| |||| |||||||||    
T  24844672 tgacaatgatccgaaccaactcgataatagttcgaaactcgattcggcaattatctcgttgaacttggttcatgaaccaaatgagctgaacttgagctga 24844771  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||| |||| |||||||||||| |||||||||  |||||||    
T  24844772 aaattaaattcgataaataaatgagctgaacttaaggtgtatat 24844815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 477
Target Start/End: Complemental strand, 9963870 - 9963750
Alignment:
Q  358 ataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatg 456  Q
    |||||||||||||| || |||||| ||||||||||||||| |   ||||||||||||||||| |||| || || | |||||||||||||||| |||||||    
T  9963870 ataataattcgaaacttaattcgacaattaactcgttgaactgggttcatgaaccaaatgagctgaacttaagttaaaaattaagttcgttagataaatg 9963771  T
Q  457 agttgaacttaaattgtatat 477  Q
    || ||||||| | ||||||||    
T  9963770 agctgaacttgagttgtatat 9963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 2578165 - 2578079
Alignment:
Q  383 aattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||| |||||| || ||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  2578165 aattaacttgttgaacttgattcatgaatcaaatgagctgaacttgagctgaaaattaaattcgttaaataaatgagttaaacttaa 2578079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 471
Target Start/End: Original strand, 27464578 - 27464715
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| | |||||||||||||| | | |||||||||  |||||||||||||||||| ||| ||||  |||    
T  27464578 tgacaatgaaccgaaccaactcgaaaatagttcgagacttgattcgataattgatttgttgaatttggttcatgaaccaaatgagtcgaacttgaattga 27464677  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaatt 471  Q
    |||||||||||  |||||||| |||||| |||| ||||    
T  27464678 aaattaagttccctaaataaaggagttggacttgaatt 27464715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 44740529 - 44740621
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| ||||||||||||||| ||  ||||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||| |||||||    
T  44740529 gattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctaaaaattaagttcgttaaacaaatgagctgaactt 44740621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 27634802 - 27634673
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||| |||||||||| || ||| || | ||||||||||||    
T  27634802 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttagttcatgaacctaacgagctggacttgagctgaaaa 27634703  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  27634702 ttaagttcgttaattaaatgagctgaactt 27634673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 11007022 - 11007110
Alignment:
Q  379 cgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| | |||||||| ||  |||| ||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  11007022 cgataattgattcgttgaacttggttcacgaaccaaatgagtcgaacttgagttgaaaattaagctcgttaaataaatgagttgaactt 11007110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 41332335 - 41332243
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatg 456  Q
    ||||||| | ||||||| |||||||| |||||| ||  ||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  41332335 ttcgaaactcgattcgacaattaacttgttgaacttggttcataaaccaattgagttgaatttgagctgaaaattaagtttgttaaataaatg 41332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 44935854 - 44935758
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||||||| |||||  || ||||||||| ||||| ||||||| || |||||||| | ||||||||| |||||||| |||||||||||| |||||    
T  44935854 ataattaactcattgaaaatagttcatgaactaaatgggttgaatagaactgaaaatcatgttcgttaactaaatgagctgaacttaaattatatat 44935758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 472
Target Start/End: Complemental strand, 13829972 - 13829874
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattg 472  Q
    |||||||||||| | |||||||| ||  ||||| |||||||||||||||| ||||| | ||||||||  ||||||| |||||||||||||||| |||||    
T  13829972 gattcgataattgattcgttgaacttggttcataaaccaaatgagttgaacttgagttaaaaattaaactcgttaattaaatgagttgaacttgaattg 13829874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 33831626 - 33831497
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||||||  |||||||||| || ||| || | ||||||||||||    
T  33831626 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaatttggttcatgaacctaacgagctggacttgagctgaaaa 33831527  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  33831526 ttaagttcgttaattaaatgagctgaactt 33831497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 1094543 - 1094459
Alignment:
Q  383 aattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||| |||| ||||||||  |||||||||||||||||| ||| ||||| ||||||||||| ||||| ||||||||||| ||||||    
T  1094543 aattgactcattgaatttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttgaataaatgagtcgaactt 1094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 40459055 - 40458923
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| ||||| |||| || || | | ||||| ||||||   | |||||| ||  |||| ||||||||||||| ||| ||||| |||    
T  40459055 tgacaatgaaccgaaccaacttgaaaatagtttgatactcgattcaataattggtttgttgaacttggttcacgaaccaaatgagtcgaacttgagttga 40458956  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| |||||||||||||||| |||||||    
T  40458955 aaattaagctcgttaaataaatgagctgaactt 40458923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 17369039 - 17369125
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaac 464  Q
    |||| ||||||||||||||||||| || ||||||| ||||||| ||| ||||| |||||||||| || ||||| ||||||||||||||    
T  17369039 tcgacaattaactcgttgaatttagtttatgaacc-aatgagtcgaacttgagttgaaaattaaatttgttaagtaaatgagttgaac 17369125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 477
Target Start/End: Complemental strand, 17616361 - 17616258
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgt 473  Q
    ||||||| ||||| |||||||||||| || |||||||||||||||  ||| ||||||| |||||||||||| |||| |||| |||| |||| || ||| |    
T  17616361 gattcgacaattatctcgttgaatttgatacatgaaccaaatgagccgaacttgagctaaaaattaagttcattaactaaacgagtggaacatagattat 17616262  T
Q  474 atat 477  Q
    ||||    
T  17616261 atat 17616258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 41959277 - 41959147
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| ||| || || ||| ||| ||||| ||| || ||||||  |||  ||||||| || ||||||||||| || ||| || | |||||||||    
T  41959277 tgacaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttgattcatgaacctaacgagctggacttgagctga 41959178  T
Q  434 aaattaagttcgttaaataaatgagttgaac 464  Q
    |||||||||||||||| |||||||| |||||    
T  41959177 aaattaagttcgttaattaaatgagctgaac 41959147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 26436484 - 26436356
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaa 436  Q
    |||||||| |||||| || ||| |||||| || ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| ||||  |||||||||||    
T  26436484 caatgaaccgaaccaactcgattataatt-gacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctgaacgtgagctgaaaa 26436386  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  26436385 ttaagttcgttaattaaatgagctgaactt 26436356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 34064783 - 34064707
Alignment:
Q  391 cgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| ||| |||||||||| || ||| || | ||||||||||||||||||||||||| |||||||| |||||||    
T  34064783 cgttgaacttagttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaactt 34064707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 458
Target Start/End: Complemental strand, 36538790 - 36538666
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||  ||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || |||||| | |||||||||    
T  36538790 tgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttgagctga 36538691  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||||||||||| ||||||||    
T  36538690 aaattaagttcgttaattaaatgag 36538666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 441
Target Start/End: Complemental strand, 28968914 - 28968847
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaag 441  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||  || ||||| |||||||||||    
T  28968914 gattcgataattaactcgttgaattcagttcgtgaaccaaatgagtcaaatttgagttgaaaattaag 28968847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 469
Target Start/End: Original strand, 12070561 - 12070655
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    ||||| ||||||| ||||||||||| |||| | ||| |||||| | ||| ||||| |||||||||| ||||||||| |||| |||| ||||||||    
T  12070561 attcggtaattaattcgttgaatttgattcgtcaactaaatgaatcgaacttgagttgaaaattaaattcgttaaacaaataagttaaacttaaa 12070655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Complemental strand, 30713260 - 30713158
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| |||| |||||||||||| | |||| ||| ||  |||||||||||||||||  |||  |||||||||| |||||||||| || ||| |||||||||    
T  30713260 ttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacatgagctgaaatttaagttcgtcaactaattgagttgaa 30713161  T
Q  464 ctt 466  Q
    |||    
T  30713160 ctt 30713158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 40680340 - 40680255
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa 424  Q
    |||||||| |||||| ||  |||||| |||| |||| |||||||||||| |||||||||||||| || ||||| |||||||| ||||    
T  40680340 caatgaaccgaaccaactcaataatagttcggaattcgattcgataattgactcgttgaatttagtt-atgaatcaaatgagctgaa 40680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 2647035 - 2647112
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  ||||||||||||| |||  ||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  2647035 tcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaaattaagttcgttaactaaataagttgaactt 2647112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 14103355 - 14103266
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||| || ||  ||||||| |||||| ||| ||| || | |||||||||||||||||||| ||||||||  |||||||||    
T  14103355 ataattaactcgtttaacttggttcatgagccaaataagtcgaacttaaactgaaaattaagttcgttaattaaatgagcagaacttaaa 14103266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 38409612 - 38409709
Alignment:
Q  370 aatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||| ||||||| |||| | |||| ||||||  |||||||||||||||||  ||| ||||||||||||||||||| || || ||| |||| |||||||    
T  38409612 aattcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaagtttgtgaactaattgagctgaactt 38409709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 34116247 - 34116311
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||  ||| ||||||| ||||||||||||| ||||||| |||| |||||||    
T  34116247 ttcatgaaccaaatgagccgaacttgagcttaaaattaagttcgctaaataattgagctgaactt 34116311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 458
Target Start/End: Original strand, 33164077 - 33164110
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    ||||||||||||||||||||||||| ||||||||    
T  33164077 ttgagctgaaaattaagttcgttaattaaatgag 33164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 39690213 - 39690172
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||| || ||| ||||||||||||    
T  39690213 ttgagctgaaaattaagttcgtcaactaattgagttgaactt 39690172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 463
Target Start/End: Complemental strand, 40680263 - 40680226
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  40680263 tgagctgaaaattatgttcgttaaataaatgagctgaa 40680226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 45383144 - 45383269
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||| | |||||   || |||||| || ||||| | |||| ||||| |||| || |||||||||||||||| | | || ||||||| |    
T  45383144 tgacaatgaaccgaactaacttgaatttagttcgaagttcgattcaacaattgactcgatgaacttgattcatgaaccaaatgcgctaaatttgagctta 45383243  T
Q  434 aaattaagttcgttaaataaatgagt 459  Q
    ||||||| ||| |||| |||||||||    
T  45383244 aaattaatttcattaattaaatgagt 45383269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 477
Target Start/End: Complemental strand, 6140188 - 6140084
Alignment:
Q  374 tgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattg 472  Q
    ||||| ||||||||||||||| |||||| || ||  ||||||||| ||||| ||||| | |||| ||||||  |||| |||||||   |||||||||||     
T  6140188 tgatttgataattaactcgttaaatttagtttatagaccaaatgatttgaatttgagttaaaaactaagtttattaactaaatgatccgaacttaaatta 6140089  T
Q  473 tatat 477  Q
    |||||    
T  6140088 tatat 6140084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 338 - 463
Target Start/End: Complemental strand, 33124831 - 33124705
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| || |||| | ||||||| ||||||||||||||| ||  || ||||||||||||| ||||| ||||||||||||    
T  33124831 caatgaaccgaaccaactcgacaatagtttgaaactcgattcgacaattaactcgttgaacttggtttatgaaccaaatgaattgaacttgagctgaaaa 33124732  T
Q  437 ttaagttcgttaaataaatgagttgaa 463  Q
    |||||||||||||||||||||| ||||    
T  33124731 ttaagttcgttaaataaatgagctgaa 33124705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 471
Target Start/End: Original strand, 33898950 - 33899087
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| ||| ||||||| |||||  || ||| | ||  |||||||||||||||||| ||| ||||| |||    
T  33898950 tgacaatgaaccgaaccaactcgaaaatagttcgatattcgattcgagaattagttcattggacttggttcatgaaccaaatgagtcgaacttgagttga 33899049  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaatt 471  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33899050 aaattaagctcgttaaataaatgagttgaacttaaatt 33899087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 46573621 - 46573750
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| ||  | |||||||||| ||| |||||||||||| |||||||||| ||  |||||||||||||||||| ||| || || ||||||    
T  46573621 caatgaaccgaaccaactcaaaaataattcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttaagttgaaaa 46573720  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||| ||||||    
T  46573721 ttaagctcgttaaataaatgagtcgaactt 46573750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 10619020 - 10618928
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| ||||||||||||||| ||  ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10619020 gattcgacaattaactcgttgaacttggttcatgaactaaatgagctgaacttgagctgaaaattaagttcgttaaataaatgagctgaactt 10618928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 33935607 - 33935515
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  33935607 gattcgataattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctgaaaattaagttcgttaaacaaatgagatgaactt 33935515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 22075199 - 22075070
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||||||| ||   || | ||||||| |||||||||||||||  |  |||| |||||||||||| |||| ||||||||||||    
T  22075199 caatgaaccgaaccaactcgataatagtttagaactcgattcgacaattaactcgttgaacgtggttcacgaaccaaatgagctgaacttgagctgaaaa 22075100  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||||||| |||||||    
T  22075099 ttaagttcgttaaataaatgagctgaactt 22075070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 384 - 460
Target Start/End: Complemental strand, 48634537 - 48634460
Alignment:
Q  384 attaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagtt 460  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  48634537 attaactcgttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaattaagttcgttaaataaatgagtt 48634460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 17025367 - 17025499
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||| |  || |||||||||||| |||||||||| ||  |||| ||||||||||||| ||| ||||| |||    
T  17025367 tgacaatgaaccgaaccaactcgaaaatagttcaaggttcgattcgataattgactcgttgaacttggttcacgaaccaaatgagtcgaacttgagttga 17025466  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||||||||||||||| ||||||    
T  17025467 aaattaagctcgttaaataaatgagtcgaactt 17025499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 469
Target Start/End: Complemental strand, 32357100 - 32356965
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    |||||||||||  ||||| ||| | |||| ||||| | | |||||||||||||| |||||||| || |||||||||| |||||||  ||| ||||| |||    
T  32357100 tgacaatgaaccaaaccaacttaaaaatagttcgagactcgattcgataattaattcgttgaacttgattcatgaactaaatgagccgaatttgagttga 32357001  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||| ||||||||||| |||| ||||||||||||||    
T  32357000 aaataaagttcgttaagtaaacgagttgaacttaaa 32356965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 222270 - 222364
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| ||| |||| |||| ||||||||||| ||||||||| ||||||| |||||||    
T  222270 ttgattcgacaattaactcgttgaatttggttcatgaaccaaacgagctgaacttgaactgaaaattaaattcgttaaacaaatgagctgaactt 222364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 18250002 - 18250131
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||| | | | |||||||||||| | |||||||| ||  |||||||||||||||||| ||| ||||| ||||||    
T  18250002 caatgaaccgaaccaactcgaaaatagttcaagactcgattcgataattgattcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 18250101  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||| | ||||||||||||||||||||||||    
T  18250102 ttatgctcgttaaataaatgagttgaactt 18250131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 18740227 - 18740356
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||| ||| |||| ||||||| |||| || || ||  |||||||||||||||||| ||| ||||| ||||||    
T  18740227 caatgaaccgaaccaactcgaaaatagttcgagattcgatttgataattgactcattaaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 18740326  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||||||||||||| ||||||    
T  18740327 ttaagctcgttaaataaatgagtcgaactt 18740356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 21760593 - 21760721
Alignment:
Q  339 aatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaat 437  Q
    ||||||| |||||| || || |||| ||||||| | |||||||||||| | |||||||| ||  |||| ||||||||||||| ||| ||||| ||||||     
T  21760593 aatgaaccgaaccaactcgaaaatagttcgaaactcgattcgataattgattcgttgaactttgttcacgaaccaaatgagtcgaacttgagttgaaaac 21760692  T
Q  438 taagttcgttaaataaatgagttgaactt 466  Q
    |||  ||||||||||||||||||||||||    
T  21760693 taaactcgttaaataaatgagttgaactt 21760721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 26719886 - 26719822
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  26719886 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagttgaactt 26719822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 37334417 - 37334285
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||| ||| ||||| ||| ||||||||| ||||  ||||||| ||  |||||||||| || ||| || | |||||||||    
T  37334417 tgacaatgaaccgaaccaactcgattatagttcgacattcgattcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 37334318  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||| |||||||| |||||||    
T  37334317 aaattaagttcgttaattaaatgagctgaactt 37334285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 23227017 - 23227148
Alignment:
Q  347 gaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcg 445  Q
    |||||| || || |||| ||||||| | ||||||| ||||| || |||||| ||  | |||||| |||||||| |||| |||||||||||||||||||||    
T  23227017 gaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttgagctgaaaattaagttcg 23227116  T
Q  446 ttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||||||||  |||||| | ||||||||    
T  23227117 ttaaataaatgagccgaacttgagttgtatat 23227148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 477
Target Start/End: Original strand, 23236170 - 23236301
Alignment:
Q  347 gaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcg 445  Q
    |||||| || || |||| ||||||| | ||||||| ||||| || |||||| ||  | |||||| |||||||| |||| |||||||||||||||||||||    
T  23236170 gaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttgagctgaaaattaagttcg 23236269  T
Q  446 ttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||||||||  |||||| | ||||||||    
T  23236270 ttaaataaatgagccgaacttgagttgtatat 23236301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 466
Target Start/End: Complemental strand, 45176382 - 45176252
Alignment:
Q  337 acaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaa 435  Q
    ||||||||| |||| | || ||| ||| || || ||| || |||||||||||  ||||||| ||  ||||||||||||| ||| |||| || ||||||||    
T  45176382 acaatgaaccgaacaaactcgattatagtttgacattcgactcgataattaatccgttgaacttggttcatgaaccaaacgagctgaactttagctgaaa 45176283  T
Q  436 attaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||| ||||||||||||||||    
T  45176282 attaagttcgttaattaaatgagttgaactt 45176252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 44421947 - 44422040
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa-ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| ||||||||||||||| ||  ||||||||||||| ||| |||| |||||||||||| |||||||||||||| ||||||| |||||||    
T  44421947 gattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctgaaaatttaagttcgttaaacaaatgagctgaactt 44422040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 7447947 - 7447883
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7447947 ttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgttaattaaatgagttgaactt 7447883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 466
Target Start/End: Complemental strand, 31491962 - 31491822
Alignment:
Q  327 attagagatgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-t 425  Q
    ||||||| ||||||||||| ||| || ||  | |||| || || ||| |||||||||||||| |||||||| || |  |||||||||||||||| ||| |    
T  31491962 attagagctgacaatgaaccgaatcaactcaaaaatagtttgagattcgattcgataattaattcgttgaacttgacacatgaaccaaatgagtcgaact 31491863  T
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    | | || || |||||||||||||||||||| ||||||||||    
T  31491862 taaactcaatattaagttcgttaaataaattagttgaactt 31491822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 477
Target Start/End: Original strand, 33171543 - 33171683
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||| | |||||| || ||||||| ||||||| | |||  || ||||| || |||||| || ||| |||||||||||||| |||| ||||||| ||||    
T  33171543 caatgatccgaaccaactcgataatagttcgaaactcgataagacaattatcttgttgaacttgatttatgaaccaaatgagctgaacttgagctaaaaa 33171642  T
Q  437 ttaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||| |||||||||||||  |||||| | ||||||||    
T  33171643 ttaagttcattaaataaatgagccgaacttgagttgtatat 33171683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 36472578 - 36472446
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || ||||| | || | | |||||||||| | | |||||||| ||  |||||||||||||||||  ||| ||||| |||    
T  36472578 tgacaatgaaccgaaccaactcgaaaataacttgatactcgattcgataaatgattcgttgaacttggttcatgaaccaaatgagccgaacttgagttga 36472479  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||||||||||| ||||||||||    
T  36472478 aaattaagctcgttaaataaataagttgaactt 36472446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 49034255 - 49034362
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||| ||||||||| |||||| |||||   |||||||| ||  |||||||||||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  49034255 aatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgtcaaataaatgag 49034354  T
Q  459 ttgaactt 466  Q
    | ||||||    
T  49034355 tcgaactt 49034362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 5776139 - 5776268
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| || | ||||||||||||    
T  5776139 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 5776238  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  5776239 ttaagttcgttaattaaatgagctgaactt 5776268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 36927135 - 36927006
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || |||||| | ||||||| ||||    
T  36927135 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttgagctaaaaa 36927036  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| ||||||||||||||||    
T  36927035 ttaagttcgttaattaaatgagttgaactt 36927006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 463
Target Start/End: Original strand, 665856 - 665982
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  |||| |||||  |||||||||| || ||| || | ||||||||||||    
T  665856 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttaaatttggttcatgaacctaacgagctggacttgagctgaaaa 665955  T
Q  437 ttaagttcgttaaataaatgagttgaa 463  Q
    ||||||||||||| |||||||| ||||    
T  665956 ttaagttcgttaattaaatgagctgaa 665982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 24128544 - 24128589
Alignment:
Q  373 ttgattcgataattaactcgttgaatttaattcatgaaccaaatga 418  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  24128544 ttgattcgataattaactcgttgaatttggttcatgaaccaaatga 24128589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 43053008 - 43052879
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| |||||| || | |||||| |||||    
T  43053008 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaatgagctggacttgagccgaaaa 43052909  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| || ||||| |||||||    
T  43052908 ttaagttcgttaattagatgagctgaactt 43052879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 446
Target Start/End: Original strand, 27231545 - 27231657
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||||||| || | | |||| |||| |||||||||||| | |||| ||| || ||||||| | ||||||||  ||| |||| ||||    
T  27231545 tgacaatgaaccgaaccagcttaattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgtatcaaatgagccgaacttgaactga 27231644  T
Q  434 aaattaagttcgt 446  Q
    |||||||||||||    
T  27231645 aaattaagttcgt 27231657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 42072166 - 42072090
Alignment:
Q  391 cgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| || ||||||||||| || ||| || | ||||||||||||||||||||||||| |||||||| |||||||    
T  42072166 cgttgaacttgattcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaactt 42072090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 48505862 - 48505926
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||| |||||| || | ||||||||||||||||||||||||| |||||||| |||||||    
T  48505862 ttcatgaacctaatgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaactt 48505926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 29037854 - 29037921
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||||||  ||| ||||| |||||||||||| ||||||| |||||||||||| |||||    
T  29037854 ttcatgaaccaaatgagacgaacttgagttgaaaattaagtccgttaaacaaatgagttgaatttaaa 29037921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 3930813 - 3930854
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  3930813 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 3930854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 5795033 - 5795074
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  5795033 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 5795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 15434291 - 15434250
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  15434291 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 15434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 28949767 - 28949896
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttg-aattgagctgaaaa 436  Q
    |||||||| ||| || || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || ||||||||| ||||    
T  28949767 caatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggaattgagctaaaaa 28949866  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  28949867 ttaagttcgttaattaaatgagctgaactt 28949896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 35543603 - 35543691
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||| | |||||||| ||  ||||||||| |||||||| ||| ||||| ||||||||||| |||   ||||||||||||||||||    
T  35543603 attcgataattgattcgttgaacttggttcatgaactaaatgagtcgaacttgagttgaaaattaagctcg---aataaatgagttgaactt 35543691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 45055812 - 45055735
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  45055812 tcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaactt 45055735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 2466614 - 2466658
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||    
T  2466614 ttgagctgaaaatttagttcgttaaataaatgagctaaacttaaa 2466658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 29527481 - 29527401
Alignment:
Q  383 aattaactcgttgaatttaattcatgaaccaaatgagttg-----aattgagctgaaaattaagttcgttaaataaatgag 458  Q
    ||||||||||||||| || |||||| ||||||||||||||     | || ||||| |||||||||||||||| ||||||||    
T  29527481 aattaactcgttgaacttgattcattaaccaaatgagttggttgaacttcagctgtaaattaagttcgttaattaaatgag 29527401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 37239904 - 37239840
Alignment:
Q  403 ttcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||| |||||| ||||| ||||| ||||| |||||  |||||||||||||||    
T  37239904 ttcatgaaccaaatgagatgaatttgagcttaaaatcaagtttgttaatcaaatgagttgaactt 37239840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 10096542 - 10096475
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||||||||||| |||| |   |||||||||||| ||| |||||||| ||||||||||    
T  10096542 ttcatgaaccaaatgagttgaacttgaacgagaaattaagttcgctaactaaatgagctgaacttaaa 10096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 22189622 - 22189579
Alignment:
Q  282 tgtatcatttttaatcaaggtaaagattgttggtgttggatgaa 325  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||    
T  22189622 tgtatcattttcaatcaaggtagagattgttggtgttggttgaa 22189579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 41449798 - 41449747
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    ||||||||||||||| |||||||||||||| || ||||||| | ||||||||    
T  41449798 tgagctgaaaattaaattcgttaaataaattagctgaacttgagttgtatat 41449747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 18779306 - 18779248
Alignment:
Q  137 tactcattatggtgaagtatgatagttcttttcaactatgattgtcaattaagacaatg 195  Q
    ||||| |||||||| | ||||| ||||||||| |||||||||||||||| | |||||||    
T  18779306 tactctttatggtggaatatgaaagttcttttgaactatgattgtcaatgacgacaatg 18779248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 21556567 - 21556601
Alignment:
Q  8 aaagtgttgcaatcacaagttctaccgtgaagttt 42  Q
    ||||||||||||||||||||||||| |||||||||    
T  21556567 aaagtgttgcaatcacaagttctactgtgaagttt 21556601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 30919519 - 30919429
Alignment:
Q  377 ttcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||| | |||||||| ||  || | ||||||||||||| ||| ||||| |||||| |||  |||||| |||||||||||||||||    
T  30919519 ttcgataattgattcgttgaacttggtttacgaaccaaatgagtcgaacttgagttgaaaactaaactcgttagataaatgagttgaactt 30919429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 446
Target Start/End: Complemental strand, 37106935 - 37106853
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgt 446  Q
    |||| |||| |||||||||||||| |||| ||| ||| || ||| ||||||||||  ||| ||||||| ||||||||||||||    
T  37106935 ttcgtaattcgattcgataattaattcgtcgaacttagttaatgtaccaaatgagccgaacttgagctaaaaattaagttcgt 37106853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 48868227 - 48868141
Alignment:
Q  381 ataattaactcgttgaatttaattcatgaaccaaatgagttga-attgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||| || |||||||||||| ||||||||||||  || | ||||||||||| ||  |||| ||||||||| ||||||    
T  48868227 ataattaattcgttaaacttaattcatgaatcaaatgagttgaccttaaactgaaaattaaattaattaattaaatgagtagaactt 48868141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 11595857 - 11595930
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttga 462  Q
    |||||||| ||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| ||||||||||||    
T  11595857 tcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttga 11595930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 17608780 - 17608719
Alignment:
Q  406 atgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||  ||| |||| ||||||||||||||||| || ||| ||||||||||||    
T  17608780 atgaaccaaatgagccgaacttgatctgaaaattaagttcgtcaactaattgagttgaactt 17608719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 18779677 - 18779605
Alignment:
Q  14 ttgcaatcacaagttctaccgtgaagtttaggcttagagaaaattgatggaagcatcaattttgccttttggaa 87  Q
    |||||||||| ||||  |||||||||||| |||| | |||||||||||||||| || ||||||| ||| |||||    
T  18779677 ttgcaatcactagtttcaccgtgaagtttgggct-atagaaaattgatggaagaatgaattttgacttgtggaa 18779605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 26216320 - 26216279
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||| ||| |||||||    
T  26216320 ttgagctgaaaattaagttcgttaattaaaggagctgaactt 26216279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 40480148 - 40480189
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| || |||||||||||||| ||||||||||||||||    
T  40480148 ttgagctaaagattaagttcgttaactaaatgagttgaactt 40480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 20401135 - 20401003
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||  ||| ||||||||| || ||| ||||||   | ||||||||  |||||||||| | |||  |||| ||||||| |    
T  20401135 tgacaatgaaccgaaccaactcgaatatagttcgaaattcgactcggtaattagtccattgaatttggttcatgaacctactgaactgaacttgagctaa 20401036  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    | ||||||||| |||| |||||||| |||||||    
T  20401035 atattaagttctttaattaaatgagctgaactt 20401003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 37101148 - 37101236
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||   |||||| |  ||||| ||| |||||||||  | ||||| ||||||||||||| ||||||||||| |||| |||||    
T  37101148 tcgataattaatctgttgaactcgattcacgaatcaaatgagtgaacttgagttgaaaattaagtttgttaaataaataagtttaactt 37101236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 477
Target Start/End: Original strand, 4441310 - 4441450
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| ||||||| | ||||||| ||||| ||||||||| ||  |||| |||| ||||||| |||| ||||| ||||||    
T  4441310 caatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattagctcgttgaacttggttcacgaactaaatgagctgaacttgagttgaaaa 4441409  T
Q  437 ttaagttcgttaaataaatgagttgaacttaaattgtatat 477  Q
    |||||||||||||||||||||| ||||||| || |||||||    
T  4441410 ttaagttcgttaaataaatgagctgaacttgaactgtatat 4441450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 458
Target Start/End: Complemental strand, 1501982 - 1501858
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||  ||||||| | |||| || ||||||||||||||| ||  ||||||||||||||||   ||| |||||||||    
T  1501982 tgacaatgaaccgaaccaactcgacaattgttcgaaactcgatttgacaattaactcgttgaacttcgttcatgaaccaaatgaaccgaacttgagctga 1501883  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||||||||||||||||||||    
T  1501882 aaattaagttcgttaaataaatgag 1501858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 17441289 - 17441168
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| |  || |||| ||||||| | |||| | ||||||| |||||||| ||| |||||||||||||||||||||| ||||| ||||||    
T  17441289 caatgaaccgaaccaacccgaaaatagttcgaaactcgatttggtaattaattcgttgaacttagttcatgaaccaaatgagttgaacttgagttgaaaa 17441190  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    ||||| |||| |||||||||||    
T  17441189 ttaagctcgtcaaataaatgag 17441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 13312088 - 13312024
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13312088 ttcatgaaccaaatgagtcgaacttgagttgaaaattaagttcgttaaataaatgagttgaactt 13312024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 3081727 - 3081856
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| ||||||||| || |||| ||||| | | ||||||||||||   |||||||| ||  |||| ||||||||||||| ||| ||||| ||||||    
T  3081727 caatgaaccgaaccagctcgaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttgagttgaaaa 3081826  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||| ||||||| |||||||| |||||||    
T  3081827 ttaagctcgttaattaaatgagctgaactt 3081856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 10961837 - 10961934
Alignment:
Q  370 aatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||| |||| | |||||||| ||  |||||||||||||||||| ||| |||||||||||||||||||||| || ||| |||| |||||||    
T  10961837 aatttgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaatttgagctgaaaattaagttcgtcaactaattgagctgaactt 10961934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 6999361 - 6999269
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||| |||||||| ||  || |||||| ||||||| |||| ||||||||||||||||||| |||||| ||||||  |||||||    
T  6999361 gattcgataattaattcgttgaacttggttaatgaactaaatgagctgaacttgagctgaaaattaagtttgttaaacaaatgaactgaactt 6999269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 458
Target Start/End: Complemental strand, 32163647 - 32163551
Alignment:
Q  363 aattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||| |||||||||||||| |||||||| ||||||  |  |||||||||| |||||| | || ||||| ||||||||||||||||||| ||||||||    
T  32163647 aatttgaaatttgattcgacaattaactggttgaacatggttcatgaacctaatgagctaaacttgagttgaaaattaagttcgttaactaaatgag 32163551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 5640261 - 5640390
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| | | |||| |||| |||||||||||| | |||| ||| ||  |||||||||||||||||  ||| |||| |||||||    
T  5640261 caatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgaactgaaaa 5640360  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||| || ||| |||| |||||||    
T  5640361 ttaagttcgtcaactaattgagctgaactt 5640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 18095613 - 18095521
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||  | |||||||| ||  |||| ||||||||| ||| ||| ||||| | |||||||||||||||||||||||||| |||||||    
T  18095613 gattcgataatggattcgttgaacttggttcacgaaccaaataagtcgaacttgagttaaaaattaagttcgttaaataaatgagatgaactt 18095521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 18099910 - 18099818
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||  | |||||||| ||  |||| ||||||||||||| ||||| ||| | | |||||||||||||||||||||||| |||||||    
T  18099910 gattcgataatggattcgttgaacttggttcacgaaccaaatgagtcgaatttgagttaacaattaagttcgttaaataaatgagatgaactt 18099818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 466
Target Start/End: Complemental strand, 8200683 - 8200644
Alignment:
Q  427 gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8200683 gagctgaaaattaagttcgttaattaaatgagttgaactt 8200644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 466
Target Start/End: Original strand, 11460043 - 11460144
Alignment:
Q  358 ataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaattgagctgaaaattaagttcgttaaataaatga 457  Q
    |||||| |||| || | |||||||||||| | |||||||| ||  |||||||||||||||       ||||||||| ||||||||| |||||||||||||    
T  11460043 ataatagttcggaactcgattcgataattgattcgttgaacttggttcatgaaccaaatg-------ttgagctgagaattaagtttgttaaataaatga 11460135  T
Q  458 gttgaactt 466  Q
    | |||||||    
T  11460136 gctgaactt 11460144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 3437798 - 3437843
Alignment:
Q  137 tactcattatggtgaagtatgatagttcttttcaactatgattgtc 182  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||    
T  3437798 tactctttatgatgaagtatgatagttcttttgaactatgattgtc 3437843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 7437383 - 7437306
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  |||| ||||||||||||| ||| || || ||||||||||| |||||||||||||||| |||||||    
T  7437383 tcgttgaacttggttcacgaaccaaatgagtcgaactttagttgaaaattaagctcgttaaataaatgagctgaactt 7437306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 10346764 - 10346723
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  10346764 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 10346723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 443
Target Start/End: Original strand, 17507315 - 17507384
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagtt 443  Q
    |||| ||||||||||| ||||||||| |||||||||  ||||||| | || |||||||||||||||||||    
T  17507315 gatttgataattaacttgttgaatttgattcatgaattaaatgagctcaatttgagctgaaaattaagtt 17507384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 2156090 - 2156010
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatga 457  Q
    |||||| |||| || || |||||| ||||||||||||||||||| || |||| ||||||||| |||| ||||| |||||||    
T  2156090 tcgatagttaaatcattaaatttagttcatgaaccaaatgagttaaacttgatctgaaaatttagtttgttaactaaatga 2156010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 12428929 - 12428897
Alignment:
Q  426 tgagctgaaaattaagttcgttaaataaatgag 458  Q
    |||||||||||||||||||||||||||||||||    
T  12428929 tgagctgaaaattaagttcgttaaataaatgag 12428897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 464
Target Start/End: Original strand, 13355722 - 13355761
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaac 464  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  13355722 ttgagctgaaaattaagttcgttaattaaatgagctgaac 13355761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 458
Target Start/End: Original strand, 2962782 - 2962832
Alignment:
Q  409 aaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgag 458  Q
    ||||||||||||| |||| ||| ||||||||||||| ||||||||||||||    
T  2962782 aaccaaatgagttaaatttgagttgaaaattaagttagttaaataaatgag 2962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 469
Target Start/End: Original strand, 9463403 - 9463495
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    |||||||||||||| || || ||| || |||||||||||||| |||| || | || ||||||||||||||||  |||| |||  |||||||||    
T  9463403 tcgataattaactcattaaacttagtttatgaaccaaatgagctgaatttaaactaaaaattaagttcgttatttaaacgagccgaacttaaa 9463495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 9950834 - 9950898
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||||||  ||| ||||| |||||||||||||||| || ||| |||| |||||||    
T  9950834 ttcatgaaccaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagctgaactt 9950898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 34116664 - 34116628
Alignment:
Q  435 aattaagttcgttaaataaatgagttgaacttaaatt 471  Q
    |||||||||| | ||||||||||||||||||||||||    
T  34116664 aattaagttcatcaaataaatgagttgaacttaaatt 34116628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 3308065 - 3307944
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || || |||| |||| || | ||||||| ||||||||||| ||| ||| |||||||||||||||||  ||| |||||| |||||    
T  3308065 caatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgtagaacttagttcatgaaccaaatgagccgaacttgagcagaaaa 3307966  T
Q  437 ttaagttcgttaaataaatgag 458  Q
    ||||||||||||||||||||||    
T  3307965 ttaagttcgttaaataaatgag 3307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 27189118 - 27189220
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| |||| |||||||||||| | |||| ||| ||  |||||||||||||||||| ||| |||||||||||||||||||||| || ||| |||||||||    
T  27189118 ttcgtaattagattcgataattgattcgtcgaacttggttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagttgaa 27189217  T
Q  464 ctt 466  Q
    |||    
T  27189218 ctt 27189220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 1091821 - 1091729
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||||| |||||||| || |||||||||||||| |||| |||  |||| | |||||||||||||| ||| |||||||||||||||    
T  1091821 gattcgataattaattcgttgaacttgattcatgaaccaaacgagtcgaacctgagtttaaaattaagttcgtcaaacaaatgagttgaactt 1091729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 33279983 - 33280115
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaat-tgagctga 433  Q
    ||||||||||| |||||| || ||| | | |||| ||||||||||||||||| | |||| ||| ||  |||||||||||||||||  |||| |||||| |    
T  33279983 tgacaatgaaccgaaccaactcgattaaagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaatatgagctta 33280082  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| || ||| |||| |||||||    
T  33280083 aaattaagttcgtcaactaattgagctgaactt 33280115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 43384925 - 43384839
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa 424  Q
    |||||||| |||||| || || |||| ||||| ||| |||||||||||||| |||||||| ||  ||||||||||||||||||||||    
T  43384925 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattaattcgttgaagttggttcatgaaccaaatgagttgaa 43384839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 11161703 - 11161574
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    ||||||||  ||||| |||||| ||| ||||| ||| || |||||| ||||  ||||||| ||  |||||||||| || ||| || | ||||||||||||    
T  11161703 caatgaaccaaaccaacttgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 11161604  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| |||||||| |||||||    
T  11161603 ttaagttcgttaattaaatgagctgaactt 11161574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 35058407 - 35058312
Alignment:
Q  369 aaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||||||||||||||| ||||| |||||  ||||  || |||||||| |||| ||||||||||||| ||||| ||||| ||||||| |||||    
T  35058407 aaatttgattcgataattaattcgtttaatttggttcaacaatcaaatgagctgaacttgagctgaaaatcaagtttgttaactaaatgatttgaa 35058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 453614 - 453485
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||| ||| ||||| ||| || ||||||  |||  ||||||| ||  |||||||||| || ||| || | ||||| ||||||    
T  453614 caatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagttgaaaa 453515  T
Q  437 ttaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||| ||||||||||||||||    
T  453514 ttaagttcgttaattaaatgagttgaactt 453485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 43967589 - 43967512
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||||||  ||||||||||||| |||  ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  43967589 tcgttgaatttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaactt 43967512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Original strand, 9412573 - 9412659
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| ||| ||||||||||| ||  ||||||||||||||||| |||| ||||| ||| |||||| ||||||| ||||||||| ||||    
T  9412573 tcgacaatgaactcgttgaacttggttcatgaaccaaatgagctgaacttgagttgagaattaaattcgttacataaatgagctgaa 9412659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10149693 - 10149782
Alignment:
Q  1 tattataaaagtgttgcaatcacaagttctaccgtgaagtttaggcttagagaaaattgatggaagcatcaattttgccttttggaatttt 91  Q
    |||||| |||||||||||||||||||| | | | |||||| | |||| |||||||||||||| | | |||||||||||||| | |||||||    
T  10149693 tattatgaaagtgttgcaatcacaagtcccatcatgaagtatgggct-agagaaaattgatgaacgaatcaattttgccttgtagaatttt 10149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 23181249 - 23181157
Alignment:
Q  375 gattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||| |||| | |||| ||||||  |||||||||||||||||  ||| |||| ||||||||||||||||| || ||| |||| |||||||    
T  23181249 gattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgaactgaaaattaagttcgtaaactaattgagctgaactt 23181157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 24854690 - 24854590
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaattgtata 476  Q
    |||| |||||||||||| || ||  ||  |||||||||||||||||| ||||||||||||||||  ||||||| |||| |||  |||| |||| ||||||    
T  24854690 tcgacaattaactcgttaaacttggtttgtgaaccaaatgagttgaacttgagctgaaaattaaactcgttaattaaacgagccgaacctaaactgtata 24854591  T
Q  477 t 477  Q
    |    
T  24854590 t 24854590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 28492749 - 28492793
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaacttaaa 469  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  28492749 ttgagttgaaaattaagttcattagataaatgagttgaacttaaa 28492793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 466
Target Start/End: Complemental strand, 32740732 - 32740641
Alignment:
Q  376 attcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||||||||| ||||||||  ||||||||||||||||  |||| |||| ||||||| ||||||| ||| || ||| || |||||||    
T  32740732 attcgacaattaactcattgaatttggttcatgaaccaaatgaactgaacttgaactgaaaaataagttcattagattaataagctgaactt 32740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 34655112 - 34655037
Alignment:
Q  392 gttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||| ||| ||||||||||||| |||| ||| ||||||| || |||||||| ||||| |||||||||| |||||    
T  34655112 gttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagtttgttaactaaatgagttaaactt 34655037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 457
Target Start/End: Complemental strand, 22564115 - 22564017
Alignment:
Q  360 aataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatga 457  Q
    ||||||| ||||||||||||| |||||   |||||||| ||  |||||||||||||| | | ||| ||||| ||||||||||| |||| |||| |||||    
T  22564115 aataatttgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaataaatcgaacttgagttgaaaattaagctcgtcaaatgaatga 22564017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 32958026 - 32958083
Alignment:
Q  268 acaatggaagcgaatgtatcatttttaatcaaggtaaagattgttggtgttggatgaa 325  Q
    ||||||||||| ||||||||||||  ||| ||||| |||| ||||||| |||||||||    
T  32958026 acaatggaagcaaatgtatcatttgcaattaaggtgaagactgttggtattggatgaa 32958083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 944097 - 944141
Alignment:
Q  281 atgtatcatttttaatcaaggtaaagattgttggtgttggatgaa 325  Q
    |||||||||||||||||||||| || |||||||||| ||| ||||    
T  944097 atgtatcatttttaatcaaggtgaaaattgttggtgatggttgaa 944141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 9136043 - 9135963
Alignment:
Q  378 tcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatga 457  Q
    |||| ||||||||||||||| ||  || ||||| ||||| || |||| ||||||||||| ||||||| ||||| |||||||    
T  9136043 tcgacaattaactcgttgaacttggtttatgaatcaaataagctgaacttgagctgaaatttaagtttgttaactaaatga 9135963  T

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Target: scaffold0025 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 11524 - 11390
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || ||||||| || | || | ||||||| ||||| ||||| ||| ||| ||||||||||||||||| |||| || || | |    
T  11524 tgacaatgaaccgaaccaactcgataatagtttggaactcgattcgacaattacctcgtcgaacttagttcatgaaccaaatgaggtgaacttaagttaa 11425  T
Q  434 aaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||||||||||||||||||||  ||||||||    
T  11424 aaattaagttcgttaaataaatgagccgaacttaa 11390  T

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Target: scaffold0171 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 21221 - 21090
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| || || |||| ||||| | | |||||||||||| | |||||||| ||  ||||||||||||| |||| ||| ||||| |||    
T  21221 tgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttgaacttggttcatgaaccaaa-gagtcgaacttgagttga 21123  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| || |||||||||||||||||||||    
T  21122 aaattaagctcattaaataaatgagttgaactt 21090  T

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Target: scaffold0444 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 828 - 905
Alignment:
Q  390 tcgttgaatttaattcatgaaccaaatgagttgaatt-gagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||  |||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||    
T  828 tcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaagctcgttaaataaatgagttgaactt 905  T

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Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 96414 - 96282
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||| |||| || |||| ||||| ||| | |||| ||| ||| || ||||| ||||||| ||||||||||||||  || || || | |    
T  96414 tgacaatgaaccgaactagctcgaaaatagttcgagattcggttcgttaaataattcattgaacttaattcgtgaaccaaatgagtccaacttaagttca 96315  T
Q  434 aaattaagttcgttaaataaatgagttgaactt 466  Q
    |||||||| ||||||||||||||||||||||||    
T  96314 aaattaagctcgttaaataaatgagttgaactt 96282  T

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Target: scaffold0260 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 10089 - 9994
Alignment:
Q  369 aaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||| |||| |||||| ||||||||||| ||||||| ||||||||||  ||| || || ||||||||||||||||||| |||||||| ||||    
T  10089 aaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaattaagttcgttaattaaatgagctgaa 9994  T

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Target: scaffold0260; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 11569 - 11474
Alignment:
Q  369 aaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||||||| ||||||||||| |||||||| || ||||||  ||||||||||  ||| || || ||||||||||||||||||| |||||||| ||||    
T  11569 aaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaattaagttcgttaattaaatgagctgaa 11474  T

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Target: scaffold0224 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 7344 - 7446
Alignment:
Q  365 ttcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaa 463  Q
    |||| |||| |||||||||||| | |||| ||| ||  |||||||||||||||||  ||| ||||||||||||||||||||| ||| ||| |||| ||||    
T  7344 ttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaa 7443  T
Q  464 ctt 466  Q
    |||    
T  7444 ctt 7446  T

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Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 471
Target Start/End: Original strand, 51311 - 51445
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||| |||| || |||| ||||| ||| | |||| ||| ||| |||||||| ||| ||| |||||||||||||| |||  |||  | ||||    
T  51311 caatgaaccgaactagctcgaaaatagttcgagattcggttcggtaaataattcgttgaacttagttcgtgaaccaaatgagtcgaacgtgattttaaaa 51410  T
Q  437 ttaagttcgttaaataaatgagttgaacttaaatt 471  Q
    ||||| | |||||||||||||||||||||| ||||    
T  51411 ttaagcttgttaaataaatgagttgaacttgaatt 51445  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 458
Target Start/End: Complemental strand, 14560 - 14436
Alignment:
Q  335 tgacaatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 433  Q
    ||||||||||| |||||| |  || |||| ||||||| | |||||| ||||| | || ||||| ||  |||||||||||||||| ||||| |||||  ||    
T  14560 tgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcattgaacttggttcatgaaccaaatgatttgaacttgagtcga 14461  T
Q  434 aaattaagttcgttaaataaatgag 458  Q
    |||||||| |||| |||||||||||    
T  14460 aaattaagctcgtcaaataaatgag 14436  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 26695 - 26761
Alignment:
Q  403 ttcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaacttaa 468  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||| || ||| |||| |||||||||    
T  26695 ttcatgaatcaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttaa 26761  T

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Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 19339 - 19298
Alignment:
Q  425 ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  19339 ttgagctgaaaattaagttcgttaattaaatgagctgaactt 19298  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 17311 - 17238
Alignment:
Q  393 ttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaact 465  Q
    ||||| ||||||| |||||||||||||| ||  ||||  | ||||||||| |||||||||||||||||||||||    
T  17311 ttgaacttaattcgtgaaccaaatgagtcgagcttgaattcaaaattaagctcgttaaataaatgagttgaact 17238  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 12882 - 12925
Alignment:
Q  137 tactcattatggtgaagtatgatagttcttttcaactatgattg 180  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||    
T  12882 tactctttatggtggagtatgatagttcttttgaactatgattg 12925  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 463
Target Start/End: Original strand, 124490 - 124616
Alignment:
Q  338 caatgaactgaaccagcttgataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 436  Q
    |||||||| |||||| || ||  ||| |||||||||||| |||| ||||    | ||||| ||  |||||||||||||||||| ||| |||||||||  |    
T  124490 caatgaaccgaaccaactcgaatatagttcgaaatttgactcgacaattggtccattgaacttggttcatgaaccaaatgagtcgaacttgagctgatta 124589  T
Q  437 ttaagttcgttaaataaatgagttgaa 463  Q
    ||||||| ||||| |||||||| ||||    
T  124590 ttaagtttgttaattaaatgagctgaa 124616  T

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Target: scaffold0135 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 32864 - 32921
Alignment:
Q  410 accaaatgagttgaa-ttgagctgaaaattaagttcgttaaataaatgagttgaactt 466  Q
    ||||||||||| ||| ||||| || |||||||| ||||||||||||||| ||||||||    
T  32864 accaaatgagtcgaacttgagttgtaaattaagctcgttaaataaatgaattgaactt 32921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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