View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2294_low_12 (Length: 229)
Name: NF2294_low_12
Description: NF2294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2294_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 8176065 - 8176254
Alignment:
| Q |
17 |
aatatcgctaaataactagttgctaatattatgaccaatttgtcaattttggtctataaaccgatttgtcactaaatcagttactatatcacaatctttt |
116 |
Q |
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| T |
8176065 |
aatatcgctaaataactagttgctaatattatgaccgatttgtcaattttggtctataaaccgat----cactaaatcagttactatatcacaatctttt |
8176160 |
T |
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| Q |
117 |
ttgtagttttgcaagcataatattaatgacatggaagtgctatagtatatgctacctggacaatcctgtaaagaccaggaatagacattgcatc |
210 |
Q |
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| T |
8176161 |
ttgtagttttgcaagcataatattaatgacatggaagtgctatagtatatgctacctggacaatcctgtaaagaccaggaatagacattgcatc |
8176254 |
T |
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