View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2294_low_5 (Length: 300)
Name: NF2294_low_5
Description: NF2294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2294_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 290
Target Start/End: Complemental strand, 191482 - 191210
Alignment:
| Q |
18 |
tgtacaaataatgttgttgaagattgaagttttaaagttattttaaggatcttttttgttccaaggaaaatattgtgcatcctactatgatcgtggatcc |
117 |
Q |
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| T |
191482 |
tgtacaaataatgttgttgaagattgaagttttaaagttattttaaggatcttttttgttccaaggaaaatattgtgcatcctactatgatcgtggatcc |
191383 |
T |
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| Q |
118 |
taatcctctaggggaagtgcacaagacaagcttattggtgttcattagtaacaaagagatttatcaagctctcatgagcatgaagtcctacaaagttcca |
217 |
Q |
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| T |
191382 |
taatcctctaggggaagtgcacaagacaagcttattggtgttcattagtaacaaagagatttatcaagctctcatgagcatgaagtcctacaaagttcca |
191283 |
T |
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| Q |
218 |
ggtctagatgaattccaaccaatcttttataagatgttttggggggttattggtaataatgtatgctcctttg |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
191282 |
ggtctagatgaattccaaccaatcttttataagatgttttgggaggttattggtaataatgtatgctcctttg |
191210 |
T |
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