View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2294_low_6 (Length: 283)
Name: NF2294_low_6
Description: NF2294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2294_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 9995325 - 9995573
Alignment:
| Q |
14 |
aaatctttattcctaattaaaatccacatacacataaactgtgaattcaagaatacaaagtacaaacagaggataagcaataaagcaaggaaacaacaaa |
113 |
Q |
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| T |
9995325 |
aaatctttattccttattaaaaaccacatacacataaactgtgagttctagaataca-------aacagaggataagcaataaagcaaggaaacaacaaa |
9995417 |
T |
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| Q |
114 |
aacaacaagaattcagtaagaacattaacatgtgcagaaattttcaaatccaactgtgaagtacctaattagtaaactctaacataaaaaatttactcaa |
213 |
Q |
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| T |
9995418 |
aacaacaataattcagtaagaacattaacatgtgcagaaattttcaaatacaactgtgaagtacctaattagtaaactctaacataaaaaatttactcaa |
9995517 |
T |
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| Q |
214 |
aaataaagcaaggcatattgaaccttcacataaaacctaacaaacagagacaactt |
269 |
Q |
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| T |
9995518 |
aaataaaacaaggcatattgaacattcacataaaacataacaaacagagacaactt |
9995573 |
T |
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