View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2295_high_11 (Length: 282)
Name: NF2295_high_11
Description: NF2295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2295_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 40796016 - 40795918
Alignment:
| Q |
142 |
atttggcacttatttggtttgaagcaacactttagacttctaatgcatcgacacttttgaatgacgatttattttaagtatccaacatgtattgtctctg |
241 |
Q |
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| T |
40796016 |
atttggcacttatttggtttgaagcaacactttagacttctaatgcaccgacacttttgaatgacgatgtatttt-agtatccaacacgtattgtgtctg |
40795918 |
T |
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