View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2295_high_8 (Length: 317)
Name: NF2295_high_8
Description: NF2295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2295_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 288
Target Start/End: Original strand, 27267832 - 27268105
Alignment:
| Q |
16 |
atcaactt-cactcttctaagaaacaatccaatttcttcatttcctttctcttcaattgagtttctcttaaaataacacttcaatggctaggatccaaag |
114 |
Q |
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| T |
27267832 |
atcaacttacactcttctaagaaacaatccaatttcttcatttcctttctcttcaattgagtttctcttaaaataacacttcaatggctaggatccaaag |
27267931 |
T |
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| Q |
115 |
aaagctcttcccaacagaacctaccacaaaccaaaccttagactgttacggcttttgtgacccttcatgtccttcaaattgctacactaatacaaactac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
27267932 |
aaagctcttcccaacagaacctaccacaaaccaaaccttagattgttacggcttttgtgacccttcatgtccttcaaattgctacactaatacaaattac |
27268031 |
T |
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| Q |
215 |
tatttctcacccccaccattagaacacacaacacaagttaaccacgtttcctcttacttcataatcctcatttc |
288 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27268032 |
tatttctcacccccaccactagaacacacaacacaagttaaccacgtttcctcttacttcataatcctcatttc |
27268105 |
T |
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