View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2295_low_26 (Length: 258)

Name: NF2295_low_26
Description: NF2295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2295_low_26
NF2295_low_26
[»] chr1 (37 HSPs)
chr1 (1-131)||(16439832-16439962)
chr1 (166-230)||(16440603-16440667)
chr1 (162-224)||(16410743-16410805)
chr1 (166-224)||(35760938-35760996)
chr1 (166-227)||(2328376-2328437)
chr1 (166-227)||(20054104-20054165)
chr1 (166-227)||(20054560-20054621)
chr1 (166-227)||(20055016-20055077)
chr1 (166-227)||(20055472-20055533)
chr1 (166-227)||(20055928-20055989)
chr1 (166-227)||(20056384-20056445)
chr1 (166-227)||(20057287-20057348)
chr1 (166-227)||(20057743-20057804)
chr1 (166-227)||(20845685-20845746)
chr1 (166-227)||(50002731-50002792)
chr1 (166-224)||(20060364-20060422)
chr1 (166-224)||(20061215-20061273)
chr1 (166-224)||(35759632-35759690)
chr1 (165-227)||(43057088-43057150)
chr1 (165-227)||(43057546-43057608)
chr1 (166-223)||(12883589-12883646)
chr1 (166-227)||(20056840-20056901)
chr1 (166-227)||(38340967-38341028)
chr1 (166-227)||(50002309-50002370)
chr1 (166-227)||(52250267-52250328)
chr1 (167-219)||(30872975-30873027)
chr1 (168-227)||(46693761-46693820)
chr1 (166-220)||(2634992-2635046)
chr1 (173-227)||(16907295-16907349)
chr1 (167-224)||(16451958-16452015)
chr1 (167-224)||(16461111-16461168)
chr1 (166-227)||(51372898-51372959)
chr1 (165-223)||(7548156-7548214)
chr1 (166-223)||(12728056-12728114)
chr1 (173-223)||(50003106-50003156)
chr1 (166-219)||(31823108-31823161)
chr1 (166-222)||(31822687-31822743)
[»] chr5 (34 HSPs)
chr5 (165-227)||(27646858-27646920)
chr5 (165-227)||(1821967-1822029)
chr5 (165-227)||(10927426-10927488)
chr5 (166-227)||(22557030-22557091)
chr5 (166-227)||(34867851-34867912)
chr5 (167-227)||(10926971-10927031)
chr5 (166-227)||(189129-189190)
chr5 (166-227)||(2193877-2193938)
chr5 (166-227)||(2474020-2474081)
chr5 (166-227)||(8642058-8642119)
chr5 (166-227)||(17445479-17445540)
chr5 (166-227)||(21886170-21886231)
chr5 (166-227)||(22556597-22556658)
chr5 (166-223)||(42788670-42788727)
chr5 (168-224)||(15513038-15513093)
chr5 (167-227)||(30719830-30719890)
chr5 (167-222)||(4658018-4658073)
chr5 (166-224)||(3886625-3886683)
chr5 (173-227)||(20039505-20039559)
chr5 (166-224)||(34371676-34371734)
chr5 (166-224)||(34372132-34372190)
chr5 (165-223)||(39147004-39147062)
chr5 (166-223)||(2474470-2474527)
chr5 (163-223)||(16370729-16370789)
chr5 (167-226)||(30684581-30684640)
chr5 (162-223)||(5066911-5066972)
chr5 (166-227)||(18750220-18750281)
chr5 (174-227)||(24182277-24182330)
chr5 (168-223)||(3887083-3887138)
chr5 (166-229)||(18304490-18304553)
chr5 (165-227)||(32574681-32574743)
chr5 (166-223)||(8391346-8391402)
chr5 (173-230)||(20858572-20858629)
chr5 (165-202)||(29680130-29680167)
[»] chr7 (35 HSPs)
chr7 (165-227)||(2611675-2611737)
chr7 (162-227)||(6747618-6747683)
chr7 (166-224)||(6719098-6719156)
chr7 (166-224)||(9125023-9125081)
chr7 (166-227)||(2193317-2193378)
chr7 (166-227)||(2465794-2465855)
chr7 (166-227)||(2941781-2941842)
chr7 (166-227)||(11517413-11517474)
chr7 (166-227)||(13125160-13125221)
chr7 (166-227)||(36422313-36422374)
chr7 (166-223)||(42515157-42515214)
chr7 (166-227)||(42515605-42515666)
chr7 (166-230)||(35474145-35474209)
chr7 (168-227)||(46425802-46425861)
chr7 (165-227)||(679878-679939)
chr7 (173-227)||(2189205-2189259)
chr7 (166-227)||(2465985-2466046)
chr7 (166-227)||(28495915-28495976)
chr7 (166-227)||(34405615-34405676)
chr7 (171-226)||(29039049-29039104)
chr7 (165-227)||(16192380-16192442)
chr7 (166-224)||(18833350-18833408)
chr7 (173-227)||(35527152-35527206)
chr7 (169-222)||(5406615-5406668)
chr7 (174-223)||(9623273-9623322)
chr7 (166-227)||(11372512-11372573)
chr7 (173-222)||(29357487-29357536)
chr7 (167-223)||(43233478-43233534)
chr7 (168-223)||(25182426-25182481)
chr7 (165-224)||(31743847-31743906)
chr7 (173-227)||(22529266-22529320)
chr7 (165-227)||(26421783-26421845)
chr7 (165-223)||(31406607-31406665)
chr7 (172-230)||(1628774-1628829)
chr7 (167-223)||(26421330-26421386)
[»] scaffold0020 (1 HSPs)
scaffold0020 (166-227)||(107487-107548)
[»] chr2 (31 HSPs)
chr2 (166-227)||(33175019-33175080)
chr2 (166-230)||(33771059-33771123)
chr2 (165-223)||(1707106-1707164)
chr2 (166-224)||(18098902-18098960)
chr2 (165-227)||(33174564-33174626)
chr2 (166-226)||(5399841-5399901)
chr2 (168-227)||(30966295-30966354)
chr2 (165-227)||(30963286-30963348)
chr2 (166-227)||(8256587-8256648)
chr2 (166-223)||(16379002-16379059)
chr2 (166-223)||(16379458-16379515)
chr2 (166-227)||(30966751-30966812)
chr2 (166-227)||(41754350-41754411)
chr2 (167-223)||(13191039-13191095)
chr2 (166-226)||(29804744-29804804)
chr2 (168-224)||(38898938-38898994)
chr2 (167-221)||(1953222-1953276)
chr2 (165-223)||(8073957-8074015)
chr2 (170-224)||(15619962-15620016)
chr2 (173-227)||(25338028-25338082)
chr2 (173-222)||(1912591-1912640)
chr2 (166-227)||(24818387-24818448)
chr2 (166-224)||(83081-83139)
chr2 (165-227)||(25434079-25434141)
chr2 (165-223)||(30963743-30963801)
chr2 (166-215)||(11388260-11388309)
chr2 (166-215)||(11394607-11394656)
chr2 (166-227)||(29259644-29259705)
chr2 (170-224)||(15639798-15639852)
chr2 (165-227)||(20502084-20502145)
chr2 (167-224)||(27882951-27883008)
[»] chr8 (34 HSPs)
chr8 (165-227)||(2044119-2044181)
chr8 (166-227)||(6464934-6464995)
chr8 (166-227)||(22026440-22026501)
chr8 (162-227)||(34308499-34308564)
chr8 (166-224)||(10844947-10845005)
chr8 (165-227)||(41913031-41913093)
chr8 (166-227)||(12827278-12827339)
chr8 (166-223)||(22549019-22549076)
chr8 (166-227)||(25147597-25147658)
chr8 (166-227)||(27925960-27926021)
chr8 (166-227)||(28375078-28375139)
chr8 (166-222)||(22548573-22548629)
chr8 (166-226)||(25144834-25144894)
chr8 (167-227)||(27021904-27021964)
chr8 (165-220)||(8080365-8080420)
chr8 (165-223)||(33852281-33852339)
chr8 (173-223)||(41659136-41659186)
chr8 (166-227)||(10844639-10844700)
chr8 (166-223)||(22840553-22840610)
chr8 (167-227)||(15567581-15567641)
chr8 (165-224)||(32292461-32292520)
chr8 (165-223)||(3745166-3745224)
chr8 (166-224)||(12100755-12100813)
chr8 (173-227)||(27022369-27022423)
chr8 (173-227)||(27819277-27819331)
chr8 (165-223)||(28453403-28453461)
chr8 (166-223)||(3744703-3744760)
chr8 (166-223)||(17103146-17103203)
chr8 (178-227)||(22705233-22705282)
chr8 (166-227)||(25148028-25148089)
chr8 (173-224)||(21316140-21316191)
chr8 (162-192)||(10729706-10729736)
chr8 (173-223)||(30334939-30334989)
chr8 (178-223)||(6466775-6466820)
[»] chr6 (30 HSPs)
chr6 (165-227)||(21312032-21312094)
chr6 (166-227)||(13191537-13191598)
chr6 (166-227)||(20126206-20126267)
chr6 (167-227)||(3652547-3652607)
chr6 (165-227)||(11062346-11062408)
chr6 (166-228)||(13492392-13492454)
chr6 (173-227)||(20896719-20896773)
chr6 (166-223)||(2681240-2681297)
chr6 (166-223)||(7911943-7912000)
chr6 (166-227)||(13492850-13492911)
chr6 (166-227)||(17027555-17027616)
chr6 (166-227)||(20850382-20850443)
chr6 (167-227)||(20735756-20735816)
chr6 (166-226)||(23986341-23986401)
chr6 (165-227)||(17851435-17851497)
chr6 (166-224)||(27334225-27334283)
chr6 (166-224)||(27394965-27395023)
chr6 (166-223)||(6330936-6330993)
chr6 (166-227)||(15929643-15929704)
chr6 (166-227)||(16520029-16520090)
chr6 (168-223)||(14771745-14771800)
chr6 (166-224)||(31821716-31821774)
chr6 (166-223)||(7912375-7912432)
chr6 (166-223)||(23776506-23776563)
chr6 (172-227)||(32292946-32293001)
chr6 (166-224)||(9440333-9440391)
chr6 (166-223)||(9352127-9352184)
chr6 (166-230)||(15929257-15929321)
chr6 (166-223)||(17731133-17731194)
chr6 (172-224)||(28065868-28065920)
[»] chr4 (43 HSPs)
chr4 (165-227)||(4127906-4127968)
chr4 (166-227)||(12692017-12692078)
chr4 (166-227)||(50398556-50398617)
chr4 (168-224)||(21220351-21220407)
chr4 (165-223)||(1645766-1645824)
chr4 (165-223)||(8467817-8467875)
chr4 (166-224)||(23942807-23942865)
chr4 (165-227)||(27026564-27026625)
chr4 (166-223)||(1464212-1464269)
chr4 (166-223)||(4127455-4127512)
chr4 (166-227)||(7678640-7678701)
chr4 (163-224)||(14571736-14571797)
chr4 (173-226)||(17628573-17628626)
chr4 (166-227)||(23350301-23350362)
chr4 (173-226)||(24629002-24629055)
chr4 (166-223)||(44471343-44471400)
chr4 (166-223)||(49998701-49998758)
chr4 (166-227)||(50399011-50399072)
chr4 (174-226)||(14572176-14572228)
chr4 (168-224)||(24629453-24629509)
chr4 (167-227)||(31817871-31817931)
chr4 (168-223)||(3169271-3169326)
chr4 (176-227)||(44470902-44470953)
chr4 (165-227)||(9423875-9423937)
chr4 (167-224)||(43928982-43929039)
chr4 (166-227)||(51331299-51331360)
chr4 (166-222)||(50814843-50814899)
chr4 (168-224)||(53996135-53996191)
chr4 (166-221)||(4185782-4185837)
chr4 (172-222)||(23976243-23976293)
chr4 (165-223)||(27029342-27029400)
chr4 (174-223)||(13613923-13613972)
chr4 (162-227)||(14351856-14351921)
chr4 (178-227)||(20306191-20306240)
chr4 (166-223)||(23943260-23943317)
chr4 (166-219)||(33764929-33764982)
chr4 (166-228)||(23091529-23091591)
chr4 (168-222)||(27578477-27578531)
chr4 (173-223)||(41869983-41870033)
chr4 (165-226)||(26200302-26200363)
chr4 (173-222)||(31817423-31817472)
chr4 (167-224)||(34554493-34554550)
chr4 (166-227)||(35871689-35871749)
[»] chr3 (39 HSPs)
chr3 (165-227)||(30529748-30529810)
chr3 (165-222)||(25248177-25248234)
chr3 (166-227)||(28561807-28561868)
chr3 (166-227)||(31284300-31284361)
chr3 (166-227)||(50347807-50347868)
chr3 (165-224)||(25239100-25239159)
chr3 (165-227)||(25230271-25230333)
chr3 (165-227)||(25230728-25230790)
chr3 (165-227)||(25237858-25237920)
chr3 (165-227)||(25238315-25238377)
chr3 (166-223)||(4067384-4067441)
chr3 (166-227)||(11180058-11180119)
chr3 (166-227)||(13150578-13150639)
chr3 (166-223)||(20885141-20885198)
chr3 (166-227)||(32227245-32227306)
chr3 (166-223)||(32796959-32797016)
chr3 (165-227)||(7493942-7494004)
chr3 (165-223)||(25238707-25238765)
chr3 (165-223)||(29224389-29224447)
chr3 (173-227)||(32386765-32386819)
chr3 (162-224)||(37045099-37045161)
chr3 (166-224)||(39653228-39653286)
chr3 (166-227)||(14814010-14814071)
chr3 (166-227)||(14820215-14820276)
chr3 (166-227)||(16811442-16811503)
chr3 (166-227)||(27187354-27187415)
chr3 (166-227)||(32227561-32227622)
chr3 (166-223)||(39641002-39641059)
chr3 (167-224)||(41472364-41472421)
chr3 (166-225)||(8067343-8067402)
chr3 (165-227)||(7477252-7477314)
chr3 (173-227)||(13150130-13150184)
chr3 (173-227)||(25802579-25802633)
chr3 (166-223)||(31103984-31104041)
chr3 (166-222)||(2911161-2911217)
chr3 (173-220)||(3890046-3890093)
chr3 (168-219)||(25803030-25803081)
chr3 (166-227)||(16810986-16811047)
chr3 (166-222)||(26310013-26310069)
[»] scaffold0499 (1 HSPs)
scaffold0499 (166-227)||(2075-2136)
[»] scaffold0040 (1 HSPs)
scaffold0040 (166-227)||(2234-2295)
[»] scaffold0664 (1 HSPs)
scaffold0664 (165-224)||(4005-4064)
[»] scaffold0557 (1 HSPs)
scaffold0557 (165-227)||(2166-2228)
[»] scaffold0322 (1 HSPs)
scaffold0322 (166-227)||(19027-19088)
[»] scaffold0243 (1 HSPs)
scaffold0243 (166-227)||(1281-1342)
[»] scaffold0024 (1 HSPs)
scaffold0024 (166-227)||(105781-105842)
[»] scaffold0005 (2 HSPs)
scaffold0005 (163-224)||(245579-245640)
scaffold0005 (174-226)||(245148-245200)
[»] scaffold0088 (1 HSPs)
scaffold0088 (176-227)||(23734-23785)
[»] scaffold0007 (1 HSPs)
scaffold0007 (171-222)||(142303-142354)
[»] scaffold0047 (2 HSPs)
scaffold0047 (166-224)||(17622-17680)
scaffold0047 (166-223)||(18159-18215)
[»] scaffold0333 (2 HSPs)
scaffold0333 (166-227)||(4622-4683)
scaffold0333 (166-218)||(5091-5143)
[»] scaffold0168 (1 HSPs)
scaffold0168 (166-227)||(2803-2864)
[»] scaffold0022 (1 HSPs)
scaffold0022 (166-223)||(162702-162759)
[»] scaffold0018 (1 HSPs)
scaffold0018 (166-227)||(10361-10422)
[»] scaffold0002 (1 HSPs)
scaffold0002 (173-227)||(154818-154872)
[»] scaffold0391 (1 HSPs)
scaffold0391 (168-224)||(14805-14861)


Alignment Details
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16439832 - 16439962
Alignment:
Q  1 tggtccttggaagatactggaagttgctctcgatcccagtttgcaacttttctcaaacaaaaatgtcaattgttttcttagtgtttggttctttcatgat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16439832 tggtccttggaagatactggaagttgctcgcgatcccagtttgcaacttttctcaaacaaaaatgtcaattgttttcttagtgtttggttctttcatgat 16439931  T
Q  101 agacctggttttctgcaatgtataaagttat 131  Q
    |||||||||||||||||||||||||||||||    
T  16439932 agacctggttttctgcaatgtataaagttat 16439962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 16440603 - 16440667
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  16440603 gctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataagtctttct 16440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 16410743 - 16410805
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||    
T  16410743 ataggctaccaaaaacaagatgcatcttgttggtattggtagtagtaaataattcttataagc 16410805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 35760938 - 35760996
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  35760938 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 35760996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2328437 - 2328376
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  2328437 gctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagcctt 2328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20054104 - 20054165
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20054104 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20054560 - 20054621
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20054560 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20054621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20055016 - 20055077
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20055016 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20055077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20055472 - 20055533
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20055472 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20055533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20055928 - 20055989
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20055928 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20055989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20056384 - 20056445
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20056384 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20056445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20057287 - 20057348
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20057287 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20057348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20057743 - 20057804
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20057743 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20057804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20845685 - 20845746
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20845685 gctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagcctt 20845746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 50002731 - 50002792
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  50002731 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 50002792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 20060364 - 20060422
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  20060364 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 20061215 - 20061273
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  20061215 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20061273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 35759632 - 35759690
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  35759632 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 35759690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 43057088 - 43057150
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  43057088 ggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagcctt 43057150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 43057546 - 43057608
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  43057546 ggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagcctt 43057608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 12883646 - 12883589
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||    
T  12883646 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataag 12883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20056840 - 20056901
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  20056840 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagcctt 20056901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 38341028 - 38340967
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  38341028 gctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 38340967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 50002309 - 50002370
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||    
T  50002309 gctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagcctt 50002370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 52250328 - 52250267
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  52250328 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 52250267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 30872975 - 30873027
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattctta 219  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  30872975 ctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattctta 30873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 46693761 - 46693820
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  46693761 taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagcctt 46693820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 2635046 - 2634992
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttat 220  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  2635046 gctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttat 2634992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 16907349 - 16907295
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  16907349 aaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagcctt 16907295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 16451958 - 16452015
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  16451958 ctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 16452015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 16461111 - 16461168
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  16461111 ctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 16461168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 51372898 - 51372959
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||| |||||||||||||| | ||| |||||||  ||||||||||||||||||||    
T  51372898 gctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagcctt 51372959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 7548214 - 7548156
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||| ||||||||||||| ||| | || || ||||||||| |||||||    
T  7548214 ggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataag 7548156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 12728114 - 12728056
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagt-agcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| || ||| | |||||||||||||||||    
T  12728114 gctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag 12728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 50003106 - 50003156
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||| ||| ||||||| | ||||||| |||||||    
T  50003106 aaaagaagatgcatcttgttgatataggtagtacccaacaattattataag 50003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 31823108 - 31823161
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattctta 219  Q
    ||||||||||||||||||||| || ||| ||| ||||||| |||| ||||||||    
T  31823108 gctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 31822687 - 31822743
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||| |||||||||||||| |||||| |||  |||||| |||| |||||||||||    
T  31822687 gctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataa 31822743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 27646858 - 27646920
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27646858 ggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagcctt 27646920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 1822029 - 1821967
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  1822029 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 1821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 10927426 - 10927488
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  10927426 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 10927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 22557091 - 22557030
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  22557091 gctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagcctt 22557030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 34867912 - 34867851
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  34867912 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 34867851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 10926971 - 10927031
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  10926971 ctaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 10927031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 189190 - 189129
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||||||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  189190 gctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagcctt 189129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2193938 - 2193877
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  2193938 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 2193877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2474081 - 2474020
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| || |||| |||||||||||||||||||||    
T  2474081 gctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagcctt 2474020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 8642058 - 8642119
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  8642058 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagcctt 8642119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 17445479 - 17445540
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  17445479 gctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 17445540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 21886170 - 21886231
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  21886170 gctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagcctt 21886231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 22556658 - 22556597
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||    
T  22556658 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcctt 22556597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 42788670 - 42788727
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  42788670 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 42788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 15513038 - 15513093
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  15513038 taccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagc 15513093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 30719830 - 30719890
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| |||||||||||||||||||| |||| ||||||| |||||||||| ||||||||||    
T  30719830 ctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagcctt 30719890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 4658018 - 4658073
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||    
T  4658018 ctaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa 4658073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 3886625 - 3886683
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||| |||||||    
T  3886625 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagc 3886683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 20039505 - 20039559
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20039505 aaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20039559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 34371734 - 34371676
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  34371734 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagc 34371676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 34372190 - 34372132
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| |||||    
T  34372190 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagc 34372132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 39147062 - 39147004
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||||||||||  |||  |||||| |||||||||||||||||    
T  39147062 ggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataag 39147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 2474527 - 2474470
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  2474527 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaag 2474470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 16370729 - 16370789
Alignment:
Q  163 taggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||| | |||||||| |||  |||||| |||||||||||||||||    
T  16370729 taggctaccaaaaagaagatacgtcttgttgatataagtagtaccaaacaattcttataag 16370789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 30684581 - 30684640
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    ||||| |||||||||||||||||||| |||| | ||||| |||||||||| |||||||||    
T  30684581 ctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagcct 30684640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 5066911 - 5066972
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||| ||||||||||||| ||||||||||||| ||| | || || |||||||||||||||||    
T  5066911 atagactaccaaaaagaaaatgcatcttgttgatatagataataccaaacaattcttataag 5066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 18750220 - 18750281
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||| ||| ||| ||||||| ||||||||| |||||| ||||    
T  18750220 gctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatcctt 18750281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 24182277 - 24182330
Alignment:
Q  174 aaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||| ||| | ||||| |||| ||||||||||||||||    
T  24182277 aaagaagatgcatcttgttggtatagatagtaccaaataattcttataagcctt 24182330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 3887083 - 3887138
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||| ||||||||||||||||||||| ||| ||||||| |||| ||||| ||||||    
T  3887083 taccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataag 3887138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 18304553 - 18304490
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttc 229  Q
    |||||| ||||||| ||||||||||||| ||| ||||||| |||||||||  ||||||| ||||    
T  18304553 gctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttc 18304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 32574681 - 32574743
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||  ||||||||| |||||  ||| ||||||| |||||||||| ||||||||||    
T  32574681 ggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaattcctataagcctt 32574743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 8391346 - 8391402
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||  || |||| |||||||||||||||||    
T  8391346 gctaccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaattcttataag 8391402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 20858572 - 20858629
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    ||||||||| ||||||||||| ||| |  | || ||||||||||||||||||||||||    
T  20858572 aaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagcctttct 20858629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 29680130 - 29680167
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggta 202  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  29680130 ggctaccaaaaagaagatgcatcttgttgatataggta 29680167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 2611675 - 2611737
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  2611675 ggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagcctt 2611737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 6747618 - 6747683
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  6747618 ataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatcctt 6747683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 6719098 - 6719156
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  6719098 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 6719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 9125081 - 9125023
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  9125081 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 9125023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2193378 - 2193317
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| || |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  2193378 gctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 2193317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2465855 - 2465794
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  2465855 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagcctt 2465794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 2941781 - 2941842
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||    
T  2941781 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagcctt 2941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 11517413 - 11517474
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  11517413 gctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 11517474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 13125160 - 13125221
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  13125160 gctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagcctt 13125221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 36422374 - 36422313
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  36422374 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 36422313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 42515214 - 42515157
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||    
T  42515214 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataag 42515157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 42515666 - 42515605
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||    
T  42515666 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagcctt 42515605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 35474145 - 35474209
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    |||||||||||||||||||||||||||| |||  ||||||  |||||||||||||||| ||||||    
T  35474145 gctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttct 35474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 46425861 - 46425802
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||| ||||||||||||||||||||| ||| |||| || |||||||||||||||||||||    
T  46425861 taccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagcctt 46425802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 679939 - 679878
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  679939 ggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagcctt 679878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 2189259 - 2189205
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  2189259 aaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagcctt 2189205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2466046 - 2465985
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||| ||||||| ||| ||||||| ||||||| |||||||||||||    
T  2466046 gctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagcctt 2465985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 28495976 - 28495915
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||| ||||||||||||||    
T  28495976 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagcctt 28495915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 34405615 - 34405676
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||    
T  34405615 gctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagcctt 34405676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 29039049 - 29039104
Alignment:
Q  171 caaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||||||||||||| |||||| ||| ||||||| |||||||||||| |||||||    
T  29039049 caaaaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagcct 29039104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 16192442 - 16192380
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||| ||||||||||||||||| | | |||| || |||||||||||||||| ||||    
T  16192442 ggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataatcctt 16192380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 18833408 - 18833350
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| |||||||  ||||||||| |||||||    
T  18833408 gctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagc 18833350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 35527152 - 35527206
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  35527152 aaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagcctt 35527206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 5406615 - 5406668
Alignment:
Q  169 accaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||||| |||||||||||||||| ||| |||| || ||||||||||||||||    
T  5406615 accaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataa 5406668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 9623322 - 9623273
Alignment:
Q  174 aaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  9623322 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 9623273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 11372573 - 11372512
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||| || ||||||| ||||| ||  ||||||| |||||||||||||||||||||    
T  11372573 gctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaattcttataagcctt 11372512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 29357487 - 29357536
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    ||||||||||||||||||||| ||| | ||||| ||||||||||||||||    
T  29357487 aaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataa 29357536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 43233534 - 43233478
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||| |||| |||||||||||||||| ||| | ||||| |||||||||||||||||    
T  43233534 ctaccgaaaaaaagatgcatcttgttgatatagatagtaccaaacaattcttataag 43233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 25182481 - 25182426
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||| |||| |||||| ||||||||| ||| ||||||| |||||||||||||||||    
T  25182481 taccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataag 25182426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 31743847 - 31743906
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||| ||||||||||||||||||||| ||| | ||| | ||||| ||||||||||||    
T  31743847 ggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagc 31743906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 22529266 - 22529320
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||  ||| | ||||| |||||| ||||||||||||||    
T  22529266 aaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagcctt 22529320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 26421783 - 26421845
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| |||||||||| |||||||||| ||| || |||| | |||||||||||| ||||||    
T  26421783 ggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagcctt 26421845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 31406607 - 31406665
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||| ||||||||||||||||||||| ||| ||||  | ||||||||||| |||||    
T  31406607 ggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataag 31406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 1628829 - 1628774
Alignment:
Q  172 aaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    |||||||||||||||||||||| ||| | ||||| |||||||   ||||||||||||||    
T  1628829 aaaaagaagatgcatcttgttgatatcgatagtaccaaacaa---ttataagcctttct 1628774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 26421330 - 26421386
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||| |||| || ||||||||||||| ||| ||||||| ||| |||||||||||||    
T  26421330 ctaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 107487 - 107548
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  107487 gctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagcctt 107548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 33175080 - 33175019
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  33175080 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 33175019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 33771123 - 33771059
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  33771123 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctttct 33771059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 1707164 - 1707106
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  1707164 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1707106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 18098902 - 18098960
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  18098902 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 18098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 33174626 - 33174564
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  33174626 ggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 33174564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 5399841 - 5399901
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  5399841 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 5399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 30966354 - 30966295
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  30966354 taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 30966295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 30963286 - 30963348
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||| |||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  30963286 ggctaccaaaaataagatgcatcttgttgatataggtagtacctaacaattcttataagcctt 30963348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 8256648 - 8256587
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  8256648 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 8256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 16379059 - 16379002
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||    
T  16379059 gctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataag 16379002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 16379515 - 16379458
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||    
T  16379515 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataag 16379458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 30966812 - 30966751
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  30966812 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatcctt 30966751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 41754411 - 41754350
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||    
T  41754411 gctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagcctt 41754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 13191095 - 13191039
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||    
T  13191095 ctaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 29804804 - 29804744
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  29804804 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcct 29804744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 38898938 - 38898994
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||    
T  38898938 taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc 38898994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 1953276 - 1953222
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttata 221  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  1953276 ctaccaaaaagaagatgcatctagttgatataggtagtaccaaacaattcttata 1953222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 8074015 - 8073957
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| | |||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  8074015 ggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 15620016 - 15619962
Alignment:
Q  170 ccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  15620016 ccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagc 15619962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 25338028 - 25338082
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  25338028 aaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 25338082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 1912640 - 1912591
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  1912640 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 1912591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 24818448 - 24818387
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||| |||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  24818448 gctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagcctt 24818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 83139 - 83081
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||| ||||| |||||||||| ||| ||||||| ||||| ||||||||||||    
T  83139 gctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagc 83081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25434079 - 25434141
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||| |||| ||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  25434079 ggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagcctt 25434141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 30963743 - 30963801
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||| |||||||||||||||||||| ||| ||||| | || ||||||||||||||    
T  30963743 ggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataag 30963801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 11388309 - 11388260
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaatt 215  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||    
T  11388309 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 11388260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 11394656 - 11394607
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaatt 215  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||    
T  11394656 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt 11394607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 29259644 - 29259705
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| |||  |||||| ||||||||| | |||||||||    
T  29259644 gctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagcctt 29259705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 15639852 - 15639798
Alignment:
Q  170 ccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||| || |||||| ||| ||||||| |||||||||| |||||||    
T  15639852 ccaaaaagaagatgtatgttgttgatataggtagtaccaaacaattcctataagc 15639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 20502145 - 20502084
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||| |||| ||||||||||| ||| |  |||| |||||||||||||||||||||    
T  20502145 ggctaccaaaaa-aagaagcatcttgttgatatagaaagtaccaaacaattcttataagcctt 20502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 27882951 - 27883008
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||| |||||||||||||||||| ||| ||| | || || ||||||||||||||||||    
T  27882951 ctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagc 27883008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 2044181 - 2044119
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  2044181 ggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagcctt 2044119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 6464934 - 6464995
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  6464934 gctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 6464995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 22026501 - 22026440
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  22026501 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 22026440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 34308499 - 34308564
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||    
T  34308499 ataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagcctt 34308564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 10845005 - 10844947
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  10845005 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 10844947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 41913093 - 41913031
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||| ||||||||||| ||| ||||| | |||||||||||||||||||||    
T  41913093 ggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagcctt 41913031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 12827278 - 12827339
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  12827278 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 12827339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 22549019 - 22549076
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  22549019 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 22549076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 25147658 - 25147597
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  25147658 gctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagcctt 25147597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 27926021 - 27925960
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  27926021 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatcctt 27925960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 28375078 - 28375139
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| | | ||||||| |||||||||||||||||||||    
T  28375078 gctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagcctt 28375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 22548573 - 22548629
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  22548573 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22548629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 25144894 - 25144834
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||| |||||||||||||||||| || ||| ||||||| ||||||||||||||||||||    
T  25144894 gctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagcct 25144834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 27021904 - 27021964
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27021904 ctaccgaaaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagcctt 27021964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 8080365 - 8080420
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttat 220  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||    
T  8080365 ggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttat 8080420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 33852281 - 33852339
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||| |||||||||  ||| ||||||| |||||||||||||||||    
T  33852281 ggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataag 33852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 41659136 - 41659186
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  41659136 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 41659186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 10844639 - 10844700
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||  ||| ||||||| ||||||| |||||||||||||    
T  10844639 gctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagcctt 10844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 22840553 - 22840610
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||| ||||||||||||||||||||||| ||| | ||||| |||||||||||||||||    
T  22840553 gctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataag 22840610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 15567581 - 15567641
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||| ||||||||| |||  |||||  |||||||||||||||||||||    
T  15567581 ctaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagcctt 15567641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 32292520 - 32292461
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| ||||||||||||||| ||||||| ||| | ||||| ||||||||||||||||||    
T  32292520 ggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagc 32292461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 3745224 - 3745166
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||| |||||| ||| |||||||  ||||| ||||||||||    
T  3745224 ggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataag 3745166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 12100813 - 12100755
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||| ||| ||| ||||||| ||||||| ||||||||||    
T  12100813 gctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagc 12100755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 27022369 - 27022423
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||| ||||||||| |||||| ||| ||||||| |||||||||||||||||||||    
T  27022369 aaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagcctt 27022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 27819277 - 27819331
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||| |||||| ||| ||||||| |||||||||||||| ||||||    
T  27819277 aaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagcctt 27819331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 28453461 - 28453403
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||| |||||||||||||||||||  ||| |||||||  ||||||||||||||||    
T  28453461 ggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataag 28453403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 3744760 - 3744703
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||| ||||| |||||| ||| ||||||  |||||||||||||||||    
T  3744760 gctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataag 3744703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 17103203 - 17103146
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||| ||||||| ||| || |||| |||||||||||||||||    
T  17103203 gctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataag 17103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 22705282 - 22705233
Alignment:
Q  178 aagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataaccctt 22705233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 25148089 - 25148028
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||| ||||||||||||| ||| ||||  | |||||||||||||||||||||    
T  25148089 gctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagcctt 25148028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 21316140 - 21316191
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| |||||||||||||| ||| ||||||| |||||||||||| |||||    
T  21316140 aaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagc 21316191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 192
Target Start/End: Original strand, 10729706 - 10729736
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgtt 192  Q
    |||||||||||||||||||||||||||||||    
T  10729706 ataggctaccaaaaagaagatgcatcttgtt 10729736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 30334939 - 30334989
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||| ||||||||| ||| ||||||| ||||||||| |||||||    
T  30334939 aaaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag 30334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 6466820 - 6466775
Alignment:
Q  178 aagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 21312094 - 21312032
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  21312094 ggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagcctt 21312032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 13191537 - 13191598
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  13191537 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 13191598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 20126206 - 20126267
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||    
T  20126206 gctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagcctt 20126267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 3652607 - 3652547
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||    
T  3652607 ctaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagcctt 3652547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 11062408 - 11062346
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||| |||||||  ||||| ||||||||||||||    
T  11062408 ggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagcctt 11062346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 13492454 - 13492392
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagccttt 228  Q
    |||||| ||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  13492454 gctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagccttt 13492392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 20896719 - 20896773
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20896719 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 20896773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 2681240 - 2681297
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  2681240 gctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataag 2681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 7912000 - 7911943
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  7912000 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 7911943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 13492911 - 13492850
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  13492911 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagcctt 13492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 17027555 - 17027616
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  17027555 gctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagcctt 17027616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 20850443 - 20850382
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  20850443 gctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagcctt 20850382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 20735816 - 20735756
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  20735816 ctaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagcctt 20735756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 23986341 - 23986401
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||| ||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||    
T  23986341 gctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagcct 23986401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 17851497 - 17851435
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||  ||||||| ||||||  |||||||||||||    
T  17851497 ggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagcctt 17851435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 27334283 - 27334225
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| |||||||||| |||||||||| ||| ||||||| ||||||||||||||||||    
T  27334283 gctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagc 27334225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 27395023 - 27394965
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| |||||||||| |||||||||| ||| ||||||| ||||||||||||||||||    
T  27395023 gctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagc 27394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 6330936 - 6330993
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| |||||||||||||| |||||| ||| ||||||| |||||||||||||||||    
T  6330936 gctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataag 6330993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 15929704 - 15929643
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||||||||||||| |||||| ||| ||||||| |||| ||||||||||||||||    
T  15929704 gctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagcctt 15929643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 16520090 - 16520029
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| ||||||| ||| |||||||||    
T  16520090 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagcctt 16520029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 14771745 - 14771800
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||| ||| ||||||||| ||| ||||||| |||||||||||||||||    
T  14771745 taccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataag 14771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 31821716 - 31821774
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||| |||||||||||||||| ||| | ||||| |||| |||||||||||||    
T  31821716 gctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagc 31821774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 7912432 - 7912375
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||| ||||||||||||| ||| ||||||| |||||||||| ||||||    
T  7912432 gctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataag 7912375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 23776563 - 23776506
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| || || |||||||||||    
T  23776563 gctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataag 23776506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 32293001 - 32292946
Alignment:
Q  172 aaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| |||||| || |||||| ||| ||||||| |||||||||||||||||||||    
T  32293001 aaaaacaagatgtattttgttggtataggtagtaccaaacaattcttataagcctt 32292946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 9440333 - 9440391
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||| ||||||||||||| |||  |||||| | ||||||||||||||||    
T  9440333 gctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagc 9440391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 9352184 - 9352127
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||  ||| ||||||| ||||||| | |||||||    
T  9352184 gctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataag 9352127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 15929321 - 15929257
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctttct 230  Q
    |||||| ||||||| ||||||||| ||| ||| || | || |||||||||||||||||| |||||    
T  15929321 gctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagcttttct 15929257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 17731133 - 17731194
Alignment:
Q  166 gctaccaaaaagaagatgcatct----tgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||    ||||| ||| ||||||| |||||||||||||||||    
T  17731133 gctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttataag 17731194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 28065868 - 28065920
Alignment:
Q  172 aaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| |||||||||||||||| ||  | ||||| ||||||||||||||||||    
T  28065868 aaaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataagc 28065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 4127906 - 4127968
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  4127906 ggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 4127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 12692017 - 12692078
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  12692017 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 12692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 50398556 - 50398617
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  50398556 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 50398617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 21220351 - 21220407
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  21220351 taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 21220407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 1645766 - 1645824
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  1645766 ggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataag 1645824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 8467817 - 8467875
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  8467817 ggctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 23942807 - 23942865
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  23942807 gctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 23942865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 27026625 - 27026564
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  27026625 ggctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattcttataagcctt 27026564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 1464269 - 1464212
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  1464269 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 4127455 - 4127512
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  4127455 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 4127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 7678640 - 7678701
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  7678640 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 7678701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 14571736 - 14571797
Alignment:
Q  163 taggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||  ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  14571736 taggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 14571797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 17628626 - 17628573
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  17628626 aaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagcct 17628573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 23350301 - 23350362
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| || |||| |||||||||||||||||||||    
T  23350301 gctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagcctt 23350362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 24629002 - 24629055
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  24629002 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 24629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 44471343 - 44471400
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  44471343 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 44471400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 49998758 - 49998701
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  49998758 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 49998701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 50399011 - 50399072
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  50399011 gctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagcctt 50399072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 14572176 - 14572228
Alignment:
Q  174 aaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  14572176 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 14572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 24629453 - 24629509
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  24629453 taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 24629509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 31817871 - 31817931
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  31817871 ctaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagcctt 31817931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 3169326 - 3169271
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  3169326 taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 3169271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 44470902 - 44470953
Alignment:
Q  176 agaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  44470902 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 44470953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 9423875 - 9423937
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| | |||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  9423875 ggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagcctt 9423937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 43928982 - 43929039
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||||||| |||||    
T  43928982 ctaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagc 43929039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 51331299 - 51331360
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||||    
T  51331299 gctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagcctt 51331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 50814843 - 50814899
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||| ||||||||||||||||||||| ||| | ||||| ||||||||||||||||    
T  50814843 gctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 53996135 - 53996191
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||||||||| ||||||||| ||| ||||||| ||||||||| ||||||||    
T  53996135 taccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagc 53996191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 4185837 - 4185782
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttata 221  Q
    |||||||||||||||||||||||||||| |||  || ||| |||||||||||||||    
T  4185837 gctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttata 4185782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 23976243 - 23976293
Alignment:
Q  172 aaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  23976243 aaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 23976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 27029400 - 27029342
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||| ||||||||||||||||||||| |||  |||||| |||| ||||||||||||    
T  27029400 ggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataag 27029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 13613923 - 13613972
Alignment:
Q  174 aaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  13613923 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 13613972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14351921 - 14351856
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||| |||||||||||||||||||||||||| ||| | ||||| |||| || ||||| |||||||    
T  14351921 ataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagcctt 14351856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 20306191 - 20306240
Alignment:
Q  178 aagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||| ||| | ||||| |||||||||||||||||||||    
T  20306191 aagatgcatcttgttgatatagatagtaccaaacaattcttataagcctt 20306240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 23943260 - 23943317
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||| | || |||||||    
T  23943260 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataag 23943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 33764982 - 33764929
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattctta 219  Q
    ||||| |||||||||||||||||||||| ||| ||||| | |||||||||||||    
T  33764982 gctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 23091529 - 23091591
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagccttt 228  Q
    ||||||| |||||||||||||||||||  |||  |||||| ||||||||| ||||| ||||||    
T  23091529 gctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaatttttatacgccttt 23091591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 27578477 - 27578531
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||| ||||||||||||||||||||| ||| ||||| | |||| |||||||||||    
T  27578477 taccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 41870033 - 41869983
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||| |||||||| ||| ||||||| || ||||||||||||||    
T  41870033 aaaagaagatgcgtcttgttgatataggtagtatcatacaattcttataag 41869983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 26200302 - 26200363
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||||| |||||| ||||||||||||  ||| | ||||| ||||||||| ||||||||||    
T  26200302 ggctaccacaaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcct 26200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 31817423 - 31817472
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||||||||||| |||||| ||| ||||||| ||||||||| ||||||    
T  31817423 aaaagaagatgcattttgttggtataggtagtaccaaacaattattataa 31817472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 34554550 - 34554493
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||||||| || |||||||||| || ||| ||||||  ||||||||||||||||||    
T  34554550 ctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagc 34554493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 35871749 - 35871689
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||| ||||||||||||| ||| ||| ||| |||||||||| ||||||||||    
T  35871749 gctaccgaaaagaa-atgcatcttgttgatataggtggtaccaaacaattcatataagcctt 35871689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 30529810 - 30529748
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  30529810 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcctt 30529748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 25248234 - 25248177
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  25248234 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 25248177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 28561868 - 28561807
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28561868 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 28561807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 31284300 - 31284361
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  31284300 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 31284361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 50347868 - 50347807
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  50347868 gctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 50347807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 25239100 - 25239159
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||    
T  25239100 ggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagc 25239159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25230271 - 25230333
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  25230271 ggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagcctt 25230333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25230728 - 25230790
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  25230728 ggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaacctt 25230790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25237858 - 25237920
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  25237858 ggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagcctt 25237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25238315 - 25238377
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  25238315 ggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaacctt 25238377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 4067384 - 4067441
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  4067384 gctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 11180058 - 11180119
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  11180058 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 11180119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 13150578 - 13150639
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  13150578 gctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctt 13150639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 20885141 - 20885198
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  20885141 gctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataag 20885198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 32227245 - 32227306
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||||||||||||  ||| ||||||| | |||||||||||||||||||    
T  32227245 gctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagcctt 32227306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 32796959 - 32797016
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  32796959 gctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 32797016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 7494004 - 7493942
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||||||||||||| |||  |||||| |||| ||||||||||||||||    
T  7494004 ggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagcctt 7493942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 25238707 - 25238765
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||||||||||||||||||||| ||  | ||||| |||||||||||||||||    
T  25238707 ggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataag 25238765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 29224447 - 29224389
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||    
T  29224447 ggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataag 29224389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 32386765 - 32386819
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  32386765 aaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagcctt 32386819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 37045161 - 37045099
Alignment:
Q  162 ataggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| |||||||||||||||||| ||||||| ||| |||| || ||||||||||||||||||    
T  37045161 atagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagc 37045099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 39653286 - 39653228
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  39653286 gctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagc 39653228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 14814071 - 14814010
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||    
T  14814071 gctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagcctt 14814010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 14820276 - 14820215
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||| |||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  14820276 gctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataagcctt 14820215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 16811503 - 16811442
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||||||||||||||||||||  || ||||||| | |||||||||||||||||||    
T  16811503 gctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagcctt 16811442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 27187354 - 27187415
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||||||||||||||||  || ||| ||||||| |||||||||||||||||||||    
T  27187354 gctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagcctt 27187415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 32227622 - 32227561
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||  ||| ||||||| | |||||||||||||||||||    
T  32227622 gctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagcctt 32227561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 39641059 - 39641002
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||| |||||||||    
T  39641059 gctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataag 39641002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 41472421 - 41472364
Alignment:
Q  167 ctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||| ||||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  41472421 ctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc 41472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 8067402 - 8067343
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcc 225  Q
    |||||| |||| |||||||||||||||| ||| |||||||  ||||||||||||||||||    
T  8067402 gctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagcc 8067343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 7477314 - 7477252
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||| ||||||||||| ||||||||| |||  |||||| |||| ||||||||||||||||    
T  7477314 ggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagcctt 7477252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 13150130 - 13150184
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||  ||||||| | |||||||||||||||||||    
T  13150130 aaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagcctt 13150184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 25802579 - 25802633
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||| ||||||| ||||| |||||||| ||||||    
T  25802579 aaaagaagatgcatcttgttgatataggtagtaccaaaccattcttatcagcctt 25802633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 31103984 - 31104041
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||||||||||| |||||||| |||| ||| | ||||| |||||||||||||||||    
T  31103984 gctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 2911217 - 2911161
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    |||||||||||||| ||||||||||||| ||| |||| || ||||||||| ||||||    
T  2911217 gctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataa 2911161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 3890093 - 3890046
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttat 220  Q
    |||| |||||||||||||||| |||  |||||||||||||||||||||    
T  3890093 aaaaaaagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 25803030 - 25803081
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattctta 219  Q
    |||| |||||||||| ||||||||| |||| ||||||| |||||||||||||    
T  25803030 taccgaaaagaagatacatcttgtttttataggtagtaccaaacaattctta 25803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 16811047 - 16810986
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||| | ||| | |||||   |||||||||||||||||||    
T  16811047 gctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagcctt 16810986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 26310013 - 26310069
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    ||||||| |||||||||||||||| ||| |||  |||||| |||| |||||||||||    
T  26310013 gctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataa 26310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 2075 - 2136
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  2075 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 2136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 2234 - 2295
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  2234 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 4005 - 4064
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||    
T  4005 ggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagc 4064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 2228 - 2166
Alignment:
Q  165 ggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||||||||||  ||| || |||| |||||||||||||||||||||    
T  2228 ggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagcctt 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 19088 - 19027
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  19088 gctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagcctt 19027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 1342 - 1281
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  1342 gctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagcctt 1281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 105842 - 105781
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||    
T  105842 gctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagcctt 105781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 245640 - 245579
Alignment:
Q  163 taggctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||  ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  245640 taggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 245579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 245200 - 245148
Alignment:
Q  174 aaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcct 226  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  245200 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 245148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 23785 - 23734
Alignment:
Q  176 agaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctt 23734  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 142303 - 142354
Alignment:
Q  171 caaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataa 222  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  142303 caaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 142354  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 17622 - 17680
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    ||||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||||||||    
T  17622 gctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagc 17680  T

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Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 18159 - 18215
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    ||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||    
T  18159 gctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattcttataag 18215  T

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Target: scaffold0333 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 4683 - 4622
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||| ||| ||||    
T  4683 gctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaacctt 4622  T

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Target: scaffold0333; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 5143 - 5091
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattctt 218  Q
    |||||| ||||||||||||||||||||  ||| ||||||| ||||||||||||    
T  5143 gctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattctt 5091  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2864 - 2803
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| ||||||| ||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  2864 gctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagcctt 2803  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 162702 - 162759
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataag 223  Q
    |||||| ||||||||||||||||||||  ||| ||||||| |||||||||||||||||    
T  162702 gctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataag 162759  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 10422 - 10361
Alignment:
Q  166 gctaccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    |||||| |||| |||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  10422 gctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagcctt 10361  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 154872 - 154818
Alignment:
Q  173 aaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagcctt 227  Q
    ||||||||||||||||||||| ||  ||||||| | |||||||||||||||||||    
T  154872 aaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagcctt 154818  T

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Target: scaffold0391 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 14861 - 14805
Alignment:
Q  168 taccaaaaagaagatgcatcttgttgttattggtagtagcaaacaattcttataagc 224  Q
    |||| |||||| |||||||||| ||| ||| |||| || ||||||||||||||||||    
T  14861 taccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagc 14805  T

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