View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2299_low_2 (Length: 359)
Name: NF2299_low_2
Description: NF2299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2299_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 26029154 - 26029492
Alignment:
| Q |
1 |
aaggagttagaaagagaacacgtagactaaaatagaaaggaacgtgtctactatctagcatgcaaataggtatcatgttttgttactcaatgaactccta |
100 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26029154 |
aaggagttaggaagagaacacgtagactaaaatagaaaggaacgtgtctactatctagcatgcaaataggtatcatgttttcttactcaatgaactccta |
26029253 |
T |
|
| Q |
101 |
catgtccgcttattccacaaagactctttggttataattatatcatatgattcacaagaaacaaattaacattatcttagaaagcattgaatttattaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029254 |
catgtccgcttattccacaaagactctttggttataattatatcatatgattcacaagaaacaaattaacattatcttagaaagcattgaatttattaaa |
26029353 |
T |
|
| Q |
201 |
aatggcacaaacagttaagccacatgaaccaaagacaaagtcatttgatcttttgagtggacatagcattcctgctattggattaggcacatggaaatct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26029354 |
aatggcacaaacagttaagccacatgaaccaaagacaaagtcatttgatctgttgagtggacatagcattcctgctattggattaggcacatggaaatct |
26029453 |
T |
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| Q |
301 |
ggttcacaagctatcaattctgtcttcacagccattact |
339 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
26029454 |
ggttcacaagctatcaattctgtcttcacagccattact |
26029492 |
T |
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