View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2301_high_7 (Length: 255)
Name: NF2301_high_7
Description: NF2301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2301_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 45458243 - 45458019
Alignment:
| Q |
16 |
atgaaggagaagagttcataaacaacttcctcggattcaagatcttgcgctcgcattgtcccgaacacatataagggagcagtgctaagttgaccataaa |
115 |
Q |
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| T |
45458243 |
atgaaggagaagagttcataaacaacttcctcggattcaagatcttgcgctcgcattgtcccgaacacatataagggagcagtgctaagttgaccataaa |
45458144 |
T |
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| Q |
116 |
ctattccaataatttgaaatgacaagagaattgtttgattccatcttttattctgaaaaaataatatggagacagaaattatgaaaaggagctagggaac |
215 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45458143 |
ctattccaataatttgaattgacaagagaattgtttgattccatcttttattctgaaaaaataatatggagacagaaattatgaaaaggagctagggaac |
45458044 |
T |
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| Q |
216 |
tagaaagatcatttgtttgtatatt |
240 |
Q |
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||||||||||||||||||||||||| |
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| T |
45458043 |
tagaaagatcatttgtttgtatatt |
45458019 |
T |
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