View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2301_low_5 (Length: 270)
Name: NF2301_low_5
Description: NF2301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2301_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 37 - 251
Target Start/End: Complemental strand, 45457849 - 45457635
Alignment:
| Q |
37 |
taggatgaatgaatgaatacaaacaagtatttggaagaataagcgattaagacaatgcttgtgcttgttcaaattctatggacggacggagcatactaag |
136 |
Q |
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| T |
45457849 |
taggatgaatgaatgaatacaaacaagtatttggaagaataagcgattaagacaatgcttgtgcttgttcaaattctatggacggacggagcatactaag |
45457750 |
T |
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| Q |
137 |
tactgtaattaataagaagagaagaaaagatgatctgatcacacacttgtattaattctttctttttctctatagagtcatagatagagtatggtgaact |
236 |
Q |
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| T |
45457749 |
tactgtaattaataagaagagaagaaaagatgatctgatcacacacttgtattaattctttctttttctctatagagtcagagatagagtatggtgaact |
45457650 |
T |
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| Q |
237 |
agatcagtagcatat |
251 |
Q |
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| T |
45457649 |
agatcagtagcatat |
45457635 |
T |
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