View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2310_high_15 (Length: 244)
Name: NF2310_high_15
Description: NF2310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2310_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 45 - 230
Target Start/End: Complemental strand, 35132747 - 35132562
Alignment:
| Q |
45 |
ggccaccaccaaaaaagaagatgtatgctattggtaacttcattgttgttgtgatcaccttgtcataataatcaggtgtaaatgaaattcctgaaaaact |
144 |
Q |
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| T |
35132747 |
ggccaccaccaaaaaagaagatgtatgctattggtaacttcattgttgttgtgatcaccttgtcataataatcaggtgtaaatgaaattcctgaaaaact |
35132648 |
T |
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| Q |
145 |
atgaagaatcaaaatggggaacagttgtatttaaaaagaagttgtggattaagtgagaatttactacaaatagattagttggaaaa |
230 |
Q |
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| T |
35132647 |
atgaagaatcaaaatggggaacagttgtatttaaaaagaagttgtggattaagtgagaatttactacaaatagattagttggaaaa |
35132562 |
T |
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