View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2310_low_14 (Length: 325)
Name: NF2310_low_14
Description: NF2310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2310_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 30 - 305
Target Start/End: Complemental strand, 24225271 - 24224991
Alignment:
| Q |
30 |
aaataaaccaagaacaagagcgatccaaagacaaaaactcaaacgaaaagaacacccatacacatcccaaaacatgacaaaactatacatatcaaccaac |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24225271 |
aaataaaccaagaacaagagcgatccaaagacaaaaactcaaacaaaaagaacacccatacacatcccaaaacatgacaaaactatacatatcaaccaac |
24225172 |
T |
|
| Q |
130 |
aaccggagcaaaccgaacaaacattaaccaatgacgacaagcatcaaag-----aaacaagtaaataccacggtgaaagaataacttctacgtctctaaa |
224 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
24225171 |
aaccggagcagaccgaacaaacattaaccaatgacgacaagcatcaaagaaattaaacaagtaaataccatggtgaaagaataacttctacgtctctaaa |
24225072 |
T |
|
| Q |
225 |
atccaaaatattgatgattgatgcaattaatttcaaaacgtgctcaaaaccatccaaacaatatgcacaccgtgaatctaa |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24225071 |
atccaaaatattgatgattgatgcaattaatttcaaaacgtgctcaaaaccatccaaacaatatgcacaccgtgaatctaa |
24224991 |
T |
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