View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2310_low_23 (Length: 269)
Name: NF2310_low_23
Description: NF2310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2310_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 46072624 - 46072381
Alignment:
| Q |
14 |
gaacacaggaggaaaaagagaacaacagacgctgattaatatccgtttgttacccttttcggctacatttgtatatataccaaaaaagccacaaggagtt |
113 |
Q |
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| T |
46072624 |
gaacacaggaggaaaaagagaacaacagacgctgattaatatccgtttgttacccttttcggctacatttgtatatataccaaaaaggccacaaggagtt |
46072525 |
T |
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| Q |
114 |
agtgtaatgtttagaaaattgatcttcctttgcctgcagcagataaacaaggacatagatgaattgcattgannnnnnngggttcttataactcgtttgg |
213 |
Q |
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| T |
46072524 |
agtgtaatgtttagaaaattgatcttcctttgcctgcagcagataaacagggacatagatgaattgcattgatttttttgggttcttataactcgtttgg |
46072425 |
T |
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| Q |
214 |
ttaaccattttgtgctcaaggtgtcggatgaaatgaagaagatg |
257 |
Q |
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| T |
46072424 |
ttaaccattttgtgctcaaggtgtcagatgaaatgaagaagatg |
46072381 |
T |
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