View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2310_low_4 (Length: 460)
Name: NF2310_low_4
Description: NF2310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2310_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 13 - 444
Target Start/End: Complemental strand, 7148584 - 7148153
Alignment:
| Q |
13 |
atacttggaggaagattcatgattttcctcatggtgtttcaccttaccaaaattcatctgggaaatttgttagtggtacactcaattgggcttctaatta |
112 |
Q |
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| T |
7148584 |
atacttggaggaagattcatgattttcctcatggtgtttcaccttaccaaaattcatctgggaaatttgttagtggtacactcaattgggcttctaatta |
7148485 |
T |
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| Q |
113 |
ctcaattggttcaagttcattttggactattgtttctttggatttggagaaggaaacttatagggaagtgcttccacctgattatgaaaaggaagagtgt |
212 |
Q |
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| T |
7148484 |
ctcaattggttcaagttctttttggactattgtttctttggatttggagaaggaaacttatagggaagtgcttccacctgattatgaaaaggaagagtgt |
7148385 |
T |
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| Q |
213 |
tcaactcctagtttgagtgtgctaaagggttgtctttgcatgaattatgattacaaaaagactgattttgttgtatggttgatgaaggattatggtgtga |
312 |
Q |
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| T |
7148384 |
tcaactcctagtttgagtgtgctaaagggttgtctttgcatgaattatgattacaaaaagactgattttgttgtatggttgatgaaggattatggtgtga |
7148285 |
T |
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| Q |
313 |
gagagtcttggattaaattgttgaaaatcccttatttgccaaatcctgaagatttctcatactcagggccttattgtatttcagagaatggtgaagtctt |
412 |
Q |
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| T |
7148284 |
gagagtcttggattaaattgttgacaatcccttatttgccaaatcctgaagatttctcatactcggggccttattgtatttcagagaatggtgaagtctt |
7148185 |
T |
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| Q |
413 |
gttgatgtttgagtttgacttgattttgtatg |
444 |
Q |
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| T |
7148184 |
gttgatgtttgagtttgacttgattttgtatg |
7148153 |
T |
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