View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2312_high_32 (Length: 370)
Name: NF2312_high_32
Description: NF2312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2312_high_32 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 362
Target Start/End: Original strand, 45173929 - 45174275
Alignment:
| Q |
18 |
caaaccgccacaataggtgctaacagtgcctgtatccatgacataagtggaaccaacgtaaaatagtggcaatttgagccacggcatttaatggcaccta |
117 |
Q |
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| T |
45173929 |
caaaccgccacaataggtgctgacagtgcctgtatccatgacataagtggaaccagcgtaaaatagtggcaatttgagccacgacattttatggcaccta |
45174028 |
T |
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| Q |
118 |
aaattgccgcaactctccttattttgtacggtgtttcaccaaatttacattttatccaaacattatattgtctaacaagtgtgagtcgtaagtccgacat |
217 |
Q |
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| T |
45174029 |
aaattgccgcaactctccttgttttgtacagtgtttcaccaaactaacattttatccaaacattatattgtctaacaagtgtgaatcataagtcagacat |
45174128 |
T |
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| Q |
218 |
acatattgcttgaaaaaagtgacggttgagcagcatatagatcgnnnnnnnttcgtatcttagatgctttaaagctttagataaagatgttgtatctcta |
317 |
Q |
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| T |
45174129 |
atatcttgcttgaaaaaagtgacggttgagcaacatatagatcgaaaaaaatttgtatcttagatg-tttaaagctttagataaagatgttgtatctctc |
45174227 |
T |
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| Q |
318 |
atgaccc---agtacattcaaccgtagaaaaactaaggtgatgatgtc |
362 |
Q |
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| T |
45174228 |
atgacccagtagtacattcaactatagaaaaaccaaggtaatgatgtc |
45174275 |
T |
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