View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2312_high_38 (Length: 355)
Name: NF2312_high_38
Description: NF2312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2312_high_38 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 343
Target Start/End: Original strand, 34335410 - 34335734
Alignment:
| Q |
18 |
tgttcatgtgctgaatatagaatcataaaggagctatgatggagttaggggagggactatgtaaactgagaaagatggagttccctaatggaccgtttct |
117 |
Q |
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| T |
34335410 |
tgttcatgtgctgaatatagaatcataaaggagctatgatggagttaggggagggactatgtaaactgagaaagatggagttccctaatggaccgtttct |
34335509 |
T |
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| Q |
118 |
taagtttgagaaagatatttcagcagttttggaatttatctaccagacacaaatagagttagctgcatgtgagtaatttcattcttgaaatgttaggtat |
217 |
Q |
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| T |
34335510 |
taagtttgagaaagatatttcagcagttttggaatttatctaccagacgcaaatagagttagctgcatgtgagtaattccattcttg-aatgttaggtat |
34335608 |
T |
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| Q |
218 |
cacatgatacatgcaagttgtatcttaatccgaatcaaaatcgaactcaacgaacacaaatgttatatgattggttttggagaaattacannnnnnnnaa |
317 |
Q |
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| T |
34335609 |
cacatgatacatgcaagttgtatcttaatccgaatcaaaatcgaactcaacgaacacaaatgttatatgattggttttggagaaattacattttttttaa |
34335708 |
T |
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| Q |
318 |
cttgaatttgagcaggtagtgatgat |
343 |
Q |
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| T |
34335709 |
cttgaatttgagcaggtagtgatgat |
34335734 |
T |
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